| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cheY [H]
Identifier: 150396998
GI number: 150396998
Start: 1877988
End: 1878812
Strand: Reverse
Name: cheY [H]
Synonym: Smed_1795
Alternate gene names: 150396998
Gene position: 1878812-1877988 (Counterclockwise)
Preceding gene: 150396999
Following gene: 150396996
Centisome position: 49.68
GC content: 56.24
Gene sequence:
>825_bases ATGTCATTCTTCGGCGTTTCCGGAATGTACTATTCCGGCGAATCCCTTGGCGAGCACCGGATCGTGCTTGCCGAGGACTC CCATCTCTTTGCCTCAATGGTCTCAAAGCGGTTGAAGGAGCTTTTCGACATCGACGTCATCGTCTGTCGCGACTATGAGG ACCTGCTGTTCGCGGTCGAAAACGCTTCTTTCGCGCCGTCTCTTGCCATTTCCAATATCAATCTCCCTGGCGCGGAGAAC GGGGAGGCGCTCACCTATCTGATCGATATGAGCGTACCGACGGTCGTCTTCACCGGCTCGTTCCAGGAGAGCACGCGCGA GGCCATTCTCGCGAAGGATATTGTAGACTACGTGATTAAGGACAGCGTCTTTGCCGTCGACATGCTGGCGGAATCCGTCT GCCGATTCCTGACCAATCAGCAGCACCACGTTTTGATCGTCGACGATAGCCCAACCGCACGAGCCGTTCTGACGACGCAG TTGAAGCGCCACAACTTCCGCACGAGCACGGCGGAAAGCGGATTCGCCGCGCTGGAAATCCTGAAGAACAATTCGGACAT TGCCCTCGTCATTACCGACTACAATATGCCGGATATCGATGGATTCGAGCTTACGCGTCGGATCCGAGCAGCGCACGGCC CACATCAGGTACGCATCATCGGCGTGTCGTCGTCGATGGATCGGCTGCTCTCTGCGCGCTTCCTCAAAGCCGGCGGCAAC GATTTTGTCGTCCGGCCCTTCGTAAACGAGGAATTCTACTGCCGCGTCAACCAGAACCTCGATACGCTGACCAAGATAAA AACACTGAACGCGAAGGCGGGATGA
Upstream 100 bases:
>100_bases CCGCGGTTTGTGTCGATATCGGCGCTGGCCGCTATTAACACCGAATAAATTCTTTTGCCGCTACGGTGTCATGCGGGGAC AATCTTTTCATAGGCGATAA
Downstream 100 bases:
>100_bases GGGAAGCGTGCGGTTTTCCGGCCGCATCCCGCATCTCATCTTGTTGAAATCGATTACGGCTTGAAGGTCGACGGCCGATT TCGGAGGAGTTGGATCTCGG
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSFFGVSGMYYSGESLGEHRIVLAEDSHLFASMVSKRLKELFDIDVIVCRDYEDLLFAVENASFAPSLAISNINLPGAEN GEALTYLIDMSVPTVVFTGSFQESTREAILAKDIVDYVIKDSVFAVDMLAESVCRFLTNQQHHVLIVDDSPTARAVLTTQ LKRHNFRTSTAESGFAALEILKNNSDIALVITDYNMPDIDGFELTRRIRAAHGPHQVRIIGVSSSMDRLLSARFLKAGGN DFVVRPFVNEEFYCRVNQNLDTLTKIKTLNAKAG
Sequences:
>Translated_274_residues MSFFGVSGMYYSGESLGEHRIVLAEDSHLFASMVSKRLKELFDIDVIVCRDYEDLLFAVENASFAPSLAISNINLPGAEN GEALTYLIDMSVPTVVFTGSFQESTREAILAKDIVDYVIKDSVFAVDMLAESVCRFLTNQQHHVLIVDDSPTARAVLTTQ LKRHNFRTSTAESGFAALEILKNNSDIALVITDYNMPDIDGFELTRRIRAAHGPHQVRIIGVSSSMDRLLSARFLKAGGN DFVVRPFVNEEFYCRVNQNLDTLTKIKTLNAKAG >Mature_273_residues SFFGVSGMYYSGESLGEHRIVLAEDSHLFASMVSKRLKELFDIDVIVCRDYEDLLFAVENASFAPSLAISNINLPGAENG EALTYLIDMSVPTVVFTGSFQESTREAILAKDIVDYVIKDSVFAVDMLAESVCRFLTNQQHHVLIVDDSPTARAVLTTQL KRHNFRTSTAESGFAALEILKNNSDIALVITDYNMPDIDGFELTRRIRAAHGPHQVRIIGVSSSMDRLLSARFLKAGGND FVVRPFVNEEFYCRVNQNLDTLTKIKTLNAKAG
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787229, Length=116, Percent_Identity=31.8965517241379, Blast_Score=68, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 30425; Mature: 30294
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFGVSGMYYSGESLGEHRIVLAEDSHLFASMVSKRLKELFDIDVIVCRDYEDLLFAVE CCEEECCCEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCHHHHEEEEC NASFAPSLAISNINLPGAENGEALTYLIDMSVPTVVFTGSFQESTREAILAKDIVDYVIK CCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHH DSVFAVDMLAESVCRFLTNQQHHVLIVDDSPTARAVLTTQLKRHNFRTSTAESGFAALEI CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEE LKNNSDIALVITDYNMPDIDGFELTRRIRAAHGPHQVRIIGVSSSMDRLLSARFLKAGGN EECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCC DFVVRPFVNEEFYCRVNQNLDTLTKIKTLNAKAG CEEEEEECCCEEEEEECCCCHHHHHEEECCCCCC >Mature Secondary Structure SFFGVSGMYYSGESLGEHRIVLAEDSHLFASMVSKRLKELFDIDVIVCRDYEDLLFAVE CEEECCCEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCHHHHEEEEC NASFAPSLAISNINLPGAENGEALTYLIDMSVPTVVFTGSFQESTREAILAKDIVDYVIK CCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHH DSVFAVDMLAESVCRFLTNQQHHVLIVDDSPTARAVLTTQLKRHNFRTSTAESGFAALEI CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEE LKNNSDIALVITDYNMPDIDGFELTRRIRAAHGPHQVRIIGVSSSMDRLLSARFLKAGGN EECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCC DFVVRPFVNEEFYCRVNQNLDTLTKIKTLNAKAG CEEEEEECCCEEEEEECCCCHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9720026 [H]