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The map label for this gene is 150396936

Identifier: 150396936

GI number: 150396936

Start: 1813960

End: 1814877

Strand: Direct

Name: 150396936

Synonym: Smed_1733

Alternate gene names: NA

Gene position: 1813960-1814877 (Clockwise)

Preceding gene: 150396933

Following gene: 150396937

Centisome position: 47.96

GC content: 64.6

Gene sequence:

>918_bases
ATGGCAAAGCGCTGCCCCACAAACGAGGAGAGTTTCCCTGTCGCGCCCGAACGGCTTCAGCTGGGTGGCTTGGACAACAG
CGGAAGCGTTGATTCGGTGCGGCTCCCGCCGCATTCTCTCGCGCAGACGAGCGGCGTCTACTGGGAGCAGCCGCCCCCGG
AGGCGCTTGCCTCTCATTTCAAATGTCTTTGGGTTCATCGGATGCCGACCGGGAGCCCGGCGAACATAGCCATCGTACCC
GATGGTTGCAGCGACATCATCTGGTCTTCGAAGGGGCTTGCTCTTGTCGGGCCGGACAGAGTTGCCGCCCTTATAACGGT
TCCTGCCGGCGAAACGATTATCGGTGCTCGCTTCCGGGTCGGCGCGGCGGCATCGTGGTTGCGGACCCCGCTGCATGAGA
TCACCGGACGGACGGTGCCGTTCGATGAGCTCTGGGGTCGAAGTACGGACGAGACCGAGACGCGAATGCGGGAGGCAGCG
GACGTGCCTGAGCGGCTCCGTGTTCTTGCCGCCGACCTGCTCCAGCGCCGCGCCACCTCCCACTCCCCGCCGGCGGACCT
GGCTGCTTGCATCGCCCGGATTGAGGCCGATCAACTGACATCGGGCGATCCCATCCGCGCCCTCCTCCAGGAGATCGGTA
TCAGCGAACGCACTCTGCGCCGTCACTGCCATGAGCATCTGGGTTACGGCGCAAAGACCCTCGACCGCATTCTTCGCCTG
CAACGCTTCCTGACCGCCTGCCGCTGCGGGCCAGCGAACACGCTGGCAAGCCTCGCTCTCGAGGCCGGCTACAGCGATCA
GGCCCATCTGGCCCGCGAGGCAAGAACCCTCACATCCTTTACGCCGCGCGAAATCAAGCTGCAGTTGACCGGGCGCCCTG
GCAGCGGGCAGGTGGGGAATCTTCGTTCAACGATTTGA

Upstream 100 bases:

>100_bases
GGGGCAGATCGACCGCGAGATCTGGTCGCGCGATCAAAATCCCGCTCACAACGCCGGTGGATGGCATTGACGCAGCGGCC
GGGCGGCGCAACAAAAGGGA

Downstream 100 bases:

>100_bases
TGAGCTCATCACATAGCCGGCCCTGCATCATCGGCTTCAGCCTCGCGCCAGATAATGGCCGTTTGGTTCAAGACCGGTGC
CCGGCGAAATGCTACAAATC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAKRCPTNEESFPVAPERLQLGGLDNSGSVDSVRLPPHSLAQTSGVYWEQPPPEALASHFKCLWVHRMPTGSPANIAIVP
DGCSDIIWSSKGLALVGPDRVAALITVPAGETIIGARFRVGAAASWLRTPLHEITGRTVPFDELWGRSTDETETRMREAA
DVPERLRVLAADLLQRRATSHSPPADLAACIARIEADQLTSGDPIRALLQEIGISERTLRRHCHEHLGYGAKTLDRILRL
QRFLTACRCGPANTLASLALEAGYSDQAHLAREARTLTSFTPREIKLQLTGRPGSGQVGNLRSTI

Sequences:

>Translated_305_residues
MAKRCPTNEESFPVAPERLQLGGLDNSGSVDSVRLPPHSLAQTSGVYWEQPPPEALASHFKCLWVHRMPTGSPANIAIVP
DGCSDIIWSSKGLALVGPDRVAALITVPAGETIIGARFRVGAAASWLRTPLHEITGRTVPFDELWGRSTDETETRMREAA
DVPERLRVLAADLLQRRATSHSPPADLAACIARIEADQLTSGDPIRALLQEIGISERTLRRHCHEHLGYGAKTLDRILRL
QRFLTACRCGPANTLASLALEAGYSDQAHLAREARTLTSFTPREIKLQLTGRPGSGQVGNLRSTI
>Mature_304_residues
AKRCPTNEESFPVAPERLQLGGLDNSGSVDSVRLPPHSLAQTSGVYWEQPPPEALASHFKCLWVHRMPTGSPANIAIVPD
GCSDIIWSSKGLALVGPDRVAALITVPAGETIIGARFRVGAAASWLRTPLHEITGRTVPFDELWGRSTDETETRMREAAD
VPERLRVLAADLLQRRATSHSPPADLAACIARIEADQLTSGDPIRALLQEIGISERTLRRHCHEHLGYGAKTLDRILRLQ
RFLTACRCGPANTLASLALEAGYSDQAHLAREARTLTSFTPREIKLQLTGRPGSGQVGNLRSTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33150; Mature: 33019

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRCPTNEESFPVAPERLQLGGLDNSGSVDSVRLPPHSLAQTSGVYWEQPPPEALASHF
CCCCCCCCCCCCCCCHHHHEECCCCCCCCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHH
KCLWVHRMPTGSPANIAIVPDGCSDIIWSSKGLALVGPDRVAALITVPAGETIIGARFRV
EEEEEEECCCCCCCEEEEECCCCHHHHCCCCCEEEECCCCEEEEEEECCCCEEECCHHHH
GAAASWLRTPLHEITGRTVPFDELWGRSTDETETRMREAADVPERLRVLAADLLQRRATS
HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
HSPPADLAACIARIEADQLTSGDPIRALLQEIGISERTLRRHCHEHLGYGAKTLDRILRL
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
QRFLTACRCGPANTLASLALEAGYSDQAHLAREARTLTSFTPREIKLQLTGRPGSGQVGN
HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
LRSTI
HHCCC
>Mature Secondary Structure 
AKRCPTNEESFPVAPERLQLGGLDNSGSVDSVRLPPHSLAQTSGVYWEQPPPEALASHF
CCCCCCCCCCCCCCHHHHEECCCCCCCCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHH
KCLWVHRMPTGSPANIAIVPDGCSDIIWSSKGLALVGPDRVAALITVPAGETIIGARFRV
EEEEEEECCCCCCCEEEEECCCCHHHHCCCCCEEEECCCCEEEEEEECCCCEEECCHHHH
GAAASWLRTPLHEITGRTVPFDELWGRSTDETETRMREAADVPERLRVLAADLLQRRATS
HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
HSPPADLAACIARIEADQLTSGDPIRALLQEIGISERTLRRHCHEHLGYGAKTLDRILRL
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
QRFLTACRCGPANTLASLALEAGYSDQAHLAREARTLTSFTPREIKLQLTGRPGSGQVGN
HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
LRSTI
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]