Click here to switch to the map view.

The map label for this gene is ugpA [C]

Identifier: 150396930

GI number: 150396930

Start: 1807843

End: 1808751

Strand: Reverse

Name: ugpA [C]

Synonym: Smed_1727

Alternate gene names: 150396930

Gene position: 1808751-1807843 (Counterclockwise)

Preceding gene: 150396931

Following gene: 150396929

Centisome position: 47.83

GC content: 58.31

Gene sequence:

>909_bases
ATGACAGGTCTAACACGTGGTTCGGCGCGGCCGAACCAGTGGCTGCGAAACCTGAATGCGAAGATCGCCTCTATCCCGAT
GATTCTCACGGCAGTGGTCATCTTCGTGGGCGGCACGGCCTGGACGGTCGTCTACTCCTTTACCAATTCAAAGCTTCTGC
CGCGGCTTTCCTTCGTCGGTTTTGACCAGTATGAGCGGCTGTGGGCGGCCCCGCGCTGGCTGATCTCGATTCAGAACCTG
GCGGTCTTCGGTTTGCTGTCACTGATGTTCAGCCTGGTGATCGGCTTCGTGCTGGCCGCCCTGATGGACCAGAAGATCCG
TTTCGAGAATACGTTCCGGACGATCATGCTCTACCCATTCGCCCTGTCGTTCATCGTCACGGGCCTTGTCTGGCAATGGC
TGCTCAACCCGCAATACGGTATCCAGTCGATTGTCAGATCTCTCGGATGGACGAGCTTCGCTTTCGATCCGCTATATAAT
TCGAATATCGTCATTTACGGCATTCTCATCGCGGCGCTTTGGCAGGGCACCGGCCTCGTCATGTGCCTGATGCTGGCCGG
CCTGCGCGGCATCGACGAGGATATATGGAAGGCCTCGCGCGTCGACGGCATCCCGATGTGGAAGACCTACGTGCTGATCA
TCATCCCGATGATGCGCGGCGTCTTCATCACCACTCTGGTGATCATCGCAAGCGGCATCGTCAAGGTTTACGACCTGGTC
GTGGCGCAGACGAGCGGCGGCCCGGGGATCGCATCCGAAGTTCCGGCCAAATACGTCTACGACTACATGTTCCAGGCGCA
GAACCTGGGCCAGGGCTTCGCCGCCTCTACCATGATGCTCGTGACCGTCGCGATCATCATCGTGCCGTGGGCCTATCTGG
AATTTGGAGGAGGTCGTAAGCGTGGATAG

Upstream 100 bases:

>100_bases
CGCAGGTGCCGGAGGGGCGGCAATTTGGGCCAGCGCCGGTGGGTGTTGCCGGCGGTACCATCCGTCACTCGAAACCTTTT
CAGTTCCGGAGGAGGGAAAC

Downstream 100 bases:

>100_bases
CATCGCAGACAACAACATGGTCGTGGGTTACGAGACTGCCCCCGCCAGCCTCATGGCCGGTGCGCGCGGCAGGAAACCGC
GCAGGACGCTCTCGCGCCGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTGLTRGSARPNQWLRNLNAKIASIPMILTAVVIFVGGTAWTVVYSFTNSKLLPRLSFVGFDQYERLWAAPRWLISIQNL
AVFGLLSLMFSLVIGFVLAALMDQKIRFENTFRTIMLYPFALSFIVTGLVWQWLLNPQYGIQSIVRSLGWTSFAFDPLYN
SNIVIYGILIAALWQGTGLVMCLMLAGLRGIDEDIWKASRVDGIPMWKTYVLIIIPMMRGVFITTLVIIASGIVKVYDLV
VAQTSGGPGIASEVPAKYVYDYMFQAQNLGQGFAASTMMLVTVAIIIVPWAYLEFGGGRKRG

Sequences:

>Translated_302_residues
MTGLTRGSARPNQWLRNLNAKIASIPMILTAVVIFVGGTAWTVVYSFTNSKLLPRLSFVGFDQYERLWAAPRWLISIQNL
AVFGLLSLMFSLVIGFVLAALMDQKIRFENTFRTIMLYPFALSFIVTGLVWQWLLNPQYGIQSIVRSLGWTSFAFDPLYN
SNIVIYGILIAALWQGTGLVMCLMLAGLRGIDEDIWKASRVDGIPMWKTYVLIIIPMMRGVFITTLVIIASGIVKVYDLV
VAQTSGGPGIASEVPAKYVYDYMFQAQNLGQGFAASTMMLVTVAIIIVPWAYLEFGGGRKRG
>Mature_301_residues
TGLTRGSARPNQWLRNLNAKIASIPMILTAVVIFVGGTAWTVVYSFTNSKLLPRLSFVGFDQYERLWAAPRWLISIQNLA
VFGLLSLMFSLVIGFVLAALMDQKIRFENTFRTIMLYPFALSFIVTGLVWQWLLNPQYGIQSIVRSLGWTSFAFDPLYNS
NIVIYGILIAALWQGTGLVMCLMLAGLRGIDEDIWKASRVDGIPMWKTYVLIIIPMMRGVFITTLVIIASGIVKVYDLVV
AQTSGGPGIASEVPAKYVYDYMFQAQNLGQGFAASTMMLVTVAIIIVPWAYLEFGGGRKRG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=23.469387755102, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790465, Length=224, Percent_Identity=24.5535714285714, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33593; Mature: 33462

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLTRGSARPNQWLRNLNAKIASIPMILTAVVIFVGGTAWTVVYSFTNSKLLPRLSFVG
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHHCC
FDQYERLWAAPRWLISIQNLAVFGLLSLMFSLVIGFVLAALMDQKIRFENTFRTIMLYPF
CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSFIVTGLVWQWLLNPQYGIQSIVRSLGWTSFAFDPLYNSNIVIYGILIAALWQGTGLV
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHH
MCLMLAGLRGIDEDIWKASRVDGIPMWKTYVLIIIPMMRGVFITTLVIIASGIVKVYDLV
HHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQTSGGPGIASEVPAKYVYDYMFQAQNLGQGFAASTMMLVTVAIIIVPWAYLEFGGGRK
HHCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RG
CC
>Mature Secondary Structure 
TGLTRGSARPNQWLRNLNAKIASIPMILTAVVIFVGGTAWTVVYSFTNSKLLPRLSFVG
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHHCC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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]