| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396883
Identifier: 150396883
GI number: 150396883
Start: 1761267
End: 1761806
Strand: Direct
Name: 150396883
Synonym: Smed_1678
Alternate gene names: NA
Gene position: 1761267-1761806 (Clockwise)
Preceding gene: 150396882
Following gene: 150396884
Centisome position: 46.57
GC content: 65.0
Gene sequence:
>540_bases ATGAGCAACCCGCAGCCCTCCCCGCAGCAGAAGCGCATGGACGCGATCCGCAATCGGGTCGCGCTCGCGACCCCGGACTG GGGCATTGAATCCGATGGCGGCCGGCTCTGCCTGACTGCGGCCAGCAGCGAAGGCACTTTCCTCATCGCGACGATCGCCG CCGACGCGCCGATCGTCGACAGAGAGATGGTACTGAACGCGCCCTATGATCTAATTTGGCTGCTCGGGACCTATGACGCT CTCGCCGGCCGGTATCGCACCCTCGTCTCCGAGCTGCGCCGCCACGCACCTCCGCAGCGCCAGCAGAAGCCGAAAGATTA TGCCGCAGAATGCGCGATGAAATGCGCAGAGCCGGCCTTCAAGAAATTCCTCGAGGAGTGCCACGGCCTGGCGAAGCCCC TCACTGACGATCGCGCCGCGACAAAGGTCCGCTCGATCCTGAATCTCCGCTCGCGCAGCGAGCTGAACGATGTTGCGGCC GCAGCTGCCCGCTGGCAGGGTCTGCGCAATGCCTTTGATGCCTGGAGGCGCCGAGGATGA
Upstream 100 bases:
>100_bases GTGGCAAAAATCTCGCCTGCTGGTGCAGGCCAGGGGCACCCTGCCATGCAGACGTACTCCTCCAGGTCGCCAATCGCCCG CTGCGCGACGAGGTACGCTG
Downstream 100 bases:
>100_bases GCAGTCGTCGTGATCGCATCCGCGCAAAGATCATGTCCCGGGTCCGCATCGATCCGGTAACAGGCTGCTGGGAGTGGACC GGCCCTAATTCTGGGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSNPQPSPQQKRMDAIRNRVALATPDWGIESDGGRLCLTAASSEGTFLIATIAADAPIVDREMVLNAPYDLIWLLGTYDA LAGRYRTLVSELRRHAPPQRQQKPKDYAAECAMKCAEPAFKKFLEECHGLAKPLTDDRAATKVRSILNLRSRSELNDVAA AAARWQGLRNAFDAWRRRG
Sequences:
>Translated_179_residues MSNPQPSPQQKRMDAIRNRVALATPDWGIESDGGRLCLTAASSEGTFLIATIAADAPIVDREMVLNAPYDLIWLLGTYDA LAGRYRTLVSELRRHAPPQRQQKPKDYAAECAMKCAEPAFKKFLEECHGLAKPLTDDRAATKVRSILNLRSRSELNDVAA AAARWQGLRNAFDAWRRRG >Mature_178_residues SNPQPSPQQKRMDAIRNRVALATPDWGIESDGGRLCLTAASSEGTFLIATIAADAPIVDREMVLNAPYDLIWLLGTYDAL AGRYRTLVSELRRHAPPQRQQKPKDYAAECAMKCAEPAFKKFLEECHGLAKPLTDDRAATKVRSILNLRSRSELNDVAAA AARWQGLRNAFDAWRRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19922; Mature: 19791
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPQPSPQQKRMDAIRNRVALATPDWGIESDGGRLCLTAASSEGTFLIATIAADAPIVD CCCCCCCHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCC REMVLNAPYDLIWLLGTYDALAGRYRTLVSELRRHAPPQRQQKPKDYAAECAMKCAEPAF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCHHH KKFLEECHGLAKPLTDDRAATKVRSILNLRSRSELNDVAAAAARWQGLRNAFDAWRRRG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNPQPSPQQKRMDAIRNRVALATPDWGIESDGGRLCLTAASSEGTFLIATIAADAPIVD CCCCCCHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCC REMVLNAPYDLIWLLGTYDALAGRYRTLVSELRRHAPPQRQQKPKDYAAECAMKCAEPAF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCHHH KKFLEECHGLAKPLTDDRAATKVRSILNLRSRSELNDVAAAAARWQGLRNAFDAWRRRG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA