Click here to switch to the map view.

The map label for this gene is 150396884

Identifier: 150396884

GI number: 150396884

Start: 1761803

End: 1762168

Strand: Direct

Name: 150396884

Synonym: Smed_1679

Alternate gene names: NA

Gene position: 1761803-1762168 (Clockwise)

Preceding gene: 150396883

Following gene: 150396885

Centisome position: 46.59

GC content: 60.66

Gene sequence:

>366_bases
ATGAGCAGTCGTCGTGATCGCATCCGCGCAAAGATCATGTCCCGGGTCCGCATCGATCCGGTAACAGGCTGCTGGGAGTG
GACCGGCCCTAATTCTGGGAAGAACGGTCGAGGCAAGGGCTACCCCCGCATGTCTCTCGACGGCCAGACCGTCGCAGTAC
ACATCGCCATGTGGACCAACGAGCACGGCTACATCCCCGGGAAAAAAGAACTCGACCACGCCTGCCGCAACCGCCTTTGC
GTGCGACCGGAAATGGATCACGTCGAGATGGTCACCCGCAAGGAAAACGCCAAGCGCCGGGAACAGGCGAAGCGCGGCAT
GATCAGCCACAACGGCGGTCCAGAATTCGTATGTGAGGAAGCGTAG

Upstream 100 bases:

>100_bases
TCCTGAATCTCCGCTCGCGCAGCGAGCTGAACGATGTTGCGGCCGCAGCTGCCCGCTGGCAGGGTCTGCGCAATGCCTTT
GATGCCTGGAGGCGCCGAGG

Downstream 100 bases:

>100_bases
AGATGAAGACGCCCGACCCGATTTCCCACCAGGCCTTTTCGACATCCTTCCTCCTGTTCGCCCAGTATGGCGGCAAGGCG
ATCATTCCTGTCGAGGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSSRRDRIRAKIMSRVRIDPVTGCWEWTGPNSGKNGRGKGYPRMSLDGQTVAVHIAMWTNEHGYIPGKKELDHACRNRLC
VRPEMDHVEMVTRKENAKRREQAKRGMISHNGGPEFVCEEA

Sequences:

>Translated_121_residues
MSSRRDRIRAKIMSRVRIDPVTGCWEWTGPNSGKNGRGKGYPRMSLDGQTVAVHIAMWTNEHGYIPGKKELDHACRNRLC
VRPEMDHVEMVTRKENAKRREQAKRGMISHNGGPEFVCEEA
>Mature_120_residues
SSRRDRIRAKIMSRVRIDPVTGCWEWTGPNSGKNGRGKGYPRMSLDGQTVAVHIAMWTNEHGYIPGKKELDHACRNRLCV
RPEMDHVEMVTRKENAKRREQAKRGMISHNGGPEFVCEEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13847; Mature: 13716

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRRDRIRAKIMSRVRIDPVTGCWEWTGPNSGKNGRGKGYPRMSLDGQTVAVHIAMWTN
CCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
EHGYIPGKKELDHACRNRLCVRPEMDHVEMVTRKENAKRREQAKRGMISHNGGPEFVCEE
CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
A
C
>Mature Secondary Structure 
SSRRDRIRAKIMSRVRIDPVTGCWEWTGPNSGKNGRGKGYPRMSLDGQTVAVHIAMWTN
CCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
EHGYIPGKKELDHACRNRLCVRPEMDHVEMVTRKENAKRREQAKRGMISHNGGPEFVCEE
CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA