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The map label for this gene is 150396839

Identifier: 150396839

GI number: 150396839

Start: 1727568

End: 1728284

Strand: Direct

Name: 150396839

Synonym: Smed_1633

Alternate gene names: NA

Gene position: 1727568-1728284 (Clockwise)

Preceding gene: 150396838

Following gene: 150396848

Centisome position: 45.68

GC content: 55.37

Gene sequence:

>717_bases
ATGATACCCGTCTCTTCACTCAATGGGCGAAGGCTGCTAACCGCGTTGATGTTCGTTTTTGTTTGCGGACTATCGATACC
GGCGCGCGCGGCTGACGTCATTGATCACGATAAGGTGGTAGGATTTCAGGAGAACGTCTCCGAATTCCTCAAGAGCTTCC
AGCCTTTTCTCAAGGTCTTCAACGGCTGTGTCCCTTTCCCCGCCGTGGATGCTCATGGGAACGTCAGCGGTGGTCTGGCG
CCGTCGGGAGCGATGAACGGCCATTGCGCCCGCAGCATTGGACAGGTCTACGTCAGAGCGACGTTCTTCGGGGACCGGTG
CGGCATCATGTACGCTTGGTACTACCCCAAGGAGATGAACGTCGACGGGCCCGGCAACATGGGGCACCGATCTGGCTGGC
AAAATATCGTCGTCTGGACCGATGCTTGTAAAAGCCAGTCACACGTTATCGCGGTCAGCTACTCGAGCCATGACCATTAC
ATCCGGGACACAGATCCCTACATGAGAGGAACACATCCGAAGGTCGCCTATCAACGGAACCCATTTCCACTCAACCCTTC
ACTGTCGGGTACTCGGACAATTGGCGGGACGCAGCCTGCAATCAGCTGGGAGGCCATGACGCAGGCAGCGCGAGATGCAC
TTAACGAGTATAAGTTCGGCAAGGGCGTACCATTCAACGATGACAACTTTCTCTACAAACTGGGCAAAGCCTATTAA

Upstream 100 bases:

>100_bases
AACCAAGCACGATATTGCAAATTTAGCCCCCCGGGGCTTGCATGCTGTTGAGACATTCATGTTGCGGACCGAAATGGTTC
AAAGCAGCAAAGGAAACAAA

Downstream 100 bases:

>100_bases
TTACAACTGCAATCTCTGCGAGGCCTAATTTCGATAATGATTGGCGCCGGCTTCTTGCCGGCGTCTCTTTGCGCGAGGGC
ACCGCTCGTGGGCACCTTGG

Product: necrosis-inducing protein

Products: NA

Alternate protein names: Necrosis-Inducing Protein; Necrosis And Ethylene Inducing Protein; Necrosis Inducing Factor

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIPVSSLNGRRLLTALMFVFVCGLSIPARAADVIDHDKVVGFQENVSEFLKSFQPFLKVFNGCVPFPAVDAHGNVSGGLA
PSGAMNGHCARSIGQVYVRATFFGDRCGIMYAWYYPKEMNVDGPGNMGHRSGWQNIVVWTDACKSQSHVIAVSYSSHDHY
IRDTDPYMRGTHPKVAYQRNPFPLNPSLSGTRTIGGTQPAISWEAMTQAARDALNEYKFGKGVPFNDDNFLYKLGKAY

Sequences:

>Translated_238_residues
MIPVSSLNGRRLLTALMFVFVCGLSIPARAADVIDHDKVVGFQENVSEFLKSFQPFLKVFNGCVPFPAVDAHGNVSGGLA
PSGAMNGHCARSIGQVYVRATFFGDRCGIMYAWYYPKEMNVDGPGNMGHRSGWQNIVVWTDACKSQSHVIAVSYSSHDHY
IRDTDPYMRGTHPKVAYQRNPFPLNPSLSGTRTIGGTQPAISWEAMTQAARDALNEYKFGKGVPFNDDNFLYKLGKAY
>Mature_238_residues
MIPVSSLNGRRLLTALMFVFVCGLSIPARAADVIDHDKVVGFQENVSEFLKSFQPFLKVFNGCVPFPAVDAHGNVSGGLA
PSGAMNGHCARSIGQVYVRATFFGDRCGIMYAWYYPKEMNVDGPGNMGHRSGWQNIVVWTDACKSQSHVIAVSYSSHDHY
IRDTDPYMRGTHPKVAYQRNPFPLNPSLSGTRTIGGTQPAISWEAMTQAARDALNEYKFGKGVPFNDDNFLYKLGKAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26253; Mature: 26253

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVSSLNGRRLLTALMFVFVCGLSIPARAADVIDHDKVVGFQENVSEFLKSFQPFLKVF
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH
NGCVPFPAVDAHGNVSGGLAPSGAMNGHCARSIGQVYVRATFFGDRCGIMYAWYYPKEMN
HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEEECCCCCEEEEEECCCCCC
VDGPGNMGHRSGWQNIVVWTDACKSQSHVIAVSYSSHDHYIRDTDPYMRGTHPKVAYQRN
CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECC
PFPLNPSLSGTRTIGGTQPAISWEAMTQAARDALNEYKFGKGVPFNDDNFLYKLGKAY
CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MIPVSSLNGRRLLTALMFVFVCGLSIPARAADVIDHDKVVGFQENVSEFLKSFQPFLKVF
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH
NGCVPFPAVDAHGNVSGGLAPSGAMNGHCARSIGQVYVRATFFGDRCGIMYAWYYPKEMN
HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEEECCCCCEEEEEECCCCCC
VDGPGNMGHRSGWQNIVVWTDACKSQSHVIAVSYSSHDHYIRDTDPYMRGTHPKVAYQRN
CCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECC
PFPLNPSLSGTRTIGGTQPAISWEAMTQAARDALNEYKFGKGVPFNDDNFLYKLGKAY
CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA