Click here to switch to the map view.

The map label for this gene is 150396836

Identifier: 150396836

GI number: 150396836

Start: 1723189

End: 1724139

Strand: Reverse

Name: 150396836

Synonym: Smed_1630

Alternate gene names: NA

Gene position: 1724139-1723189 (Counterclockwise)

Preceding gene: 150396837

Following gene: 150396835

Centisome position: 45.59

GC content: 59.1

Gene sequence:

>951_bases
ATGCACAAAACGCAATGGTTCCCGGTAGGTTTTGTTGCCGGTCTTGTAGCGTTGGCGGCACCCGGTTTCGCGGGTGATCT
TGGTGCCGCTGTCAGCGGCAAAGGAACGACCGGTTCTCCAGCCGCGGAAAGCAGTAGCTCGGGCTGTCCACAAAATGCCG
ACGGCACATTTTGCTGGATGAGCCCGGATATTGGTCAAGCATGGGCATCAGGCTTTATCGGTTCCGGCGTATCGATAAAT
GTCTCAGATGACTTCACGGGACAGCCAATTGATGGAGATCTCGGTCGCGGTACGCAGAGGCAGCGCCATGGGGATTGGGT
CGCTCAAATTGCCGGCATGGTCGCCCCTGGCGCAAACATATTCAAGTATAATTATCTCGAGGAGTCTTCGATCGTGCTGC
AGGACGGCCTGAATGTCATCAATGCGAGCTACGGCATGTGGGAGCCACTGAGCCAGCATCCGCGCGAGCAGGCGATCGTC
GGTGCCGCCTGGGCGGGGACTGCCATCGTCACAAAGAGTGCCGACAACCACAGCCGCGAGGTAGGTCAGCCGCACGTAGG
GGATTTCGATGAGCTAACCATCGGGCTGATCGGGGCGCCATCGGCAGTCTTTGTGGGTGCGCTGGAGCACAATGGCACTC
CCGAGAACAAGGCACGGCTGGAGCCATACTCGAATTATGCCGGCTCAAACCCTGAGGTGCAGAACCACTTCCTGACCGTG
GGTGTCGAGCGTGAAGAGATCGGCCAACGCGGCACGTCTTTCGCGGCACCTGTGGTTGCAGGCTATGCCGCCATCCTTGG
CAGCAAGTTCACATCCGCAACACCGATACAGATTACTAATCAGCTGCTGGATACAGCCAGGACCGACACGCTCGTCAACT
ACAACCCGGCGGCTTACGGCCGCGGCGAGGCCAGCCTTTCGAGGGCGCTGGCACCCGTTTCGATCCACTAG

Upstream 100 bases:

>100_bases
GATTGAAAATCGATCTTCGGTTCACGGGTGAATTCTAGCGATGGTGAAAGGCAAGGCGGTAGATTTCGTTGATGAAGAAC
AATCAGACAGGAGATTTTTT

Downstream 100 bases:

>100_bases
ACTGCCTCTCTACCCCATGCGTCCGAACGTGGGTGGGTCGCGGCGCCCAGGCGGTGGATTGCCGTCTGTGCCGTCGCGGC
TCCGGCCGGGGAACACGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MHKTQWFPVGFVAGLVALAAPGFAGDLGAAVSGKGTTGSPAAESSSSGCPQNADGTFCWMSPDIGQAWASGFIGSGVSIN
VSDDFTGQPIDGDLGRGTQRQRHGDWVAQIAGMVAPGANIFKYNYLEESSIVLQDGLNVINASYGMWEPLSQHPREQAIV
GAAWAGTAIVTKSADNHSREVGQPHVGDFDELTIGLIGAPSAVFVGALEHNGTPENKARLEPYSNYAGSNPEVQNHFLTV
GVEREEIGQRGTSFAAPVVAGYAAILGSKFTSATPIQITNQLLDTARTDTLVNYNPAAYGRGEASLSRALAPVSIH

Sequences:

>Translated_316_residues
MHKTQWFPVGFVAGLVALAAPGFAGDLGAAVSGKGTTGSPAAESSSSGCPQNADGTFCWMSPDIGQAWASGFIGSGVSIN
VSDDFTGQPIDGDLGRGTQRQRHGDWVAQIAGMVAPGANIFKYNYLEESSIVLQDGLNVINASYGMWEPLSQHPREQAIV
GAAWAGTAIVTKSADNHSREVGQPHVGDFDELTIGLIGAPSAVFVGALEHNGTPENKARLEPYSNYAGSNPEVQNHFLTV
GVEREEIGQRGTSFAAPVVAGYAAILGSKFTSATPIQITNQLLDTARTDTLVNYNPAAYGRGEASLSRALAPVSIH
>Mature_316_residues
MHKTQWFPVGFVAGLVALAAPGFAGDLGAAVSGKGTTGSPAAESSSSGCPQNADGTFCWMSPDIGQAWASGFIGSGVSIN
VSDDFTGQPIDGDLGRGTQRQRHGDWVAQIAGMVAPGANIFKYNYLEESSIVLQDGLNVINASYGMWEPLSQHPREQAIV
GAAWAGTAIVTKSADNHSREVGQPHVGDFDELTIGLIGAPSAVFVGALEHNGTPENKARLEPYSNYAGSNPEVQNHFLTV
GVEREEIGQRGTSFAAPVVAGYAAILGSKFTSATPIQITNQLLDTARTDTLVNYNPAAYGRGEASLSRALAPVSIH

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32958; Mature: 32958

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKTQWFPVGFVAGLVALAAPGFAGDLGAAVSGKGTTGSPAAESSSSGCPQNADGTFCWM
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
SPDIGQAWASGFIGSGVSINVSDDFTGQPIDGDLGRGTQRQRHGDWVAQIAGMVAPGANI
CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE
FKYNYLEESSIVLQDGLNVINASYGMWEPLSQHPREQAIVGAAWAGTAIVTKSADNHSRE
EEEEECCCCCEEHHCCCHHEECCCCCCCCHHHCCHHHHEEEEECCCCEEEEECCCCCHHH
VGQPHVGDFDELTIGLIGAPSAVFVGALEHNGTPENKARLEPYSNYAGSNPEVQNHFLTV
CCCCCCCCHHHEEEEEECCCHHHEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GVEREEIGQRGTSFAAPVVAGYAAILGSKFTSATPIQITNQLLDTARTDTLVNYNPAAYG
ECCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCC
RGEASLSRALAPVSIH
CCHHHHHHCCCCEECC
>Mature Secondary Structure
MHKTQWFPVGFVAGLVALAAPGFAGDLGAAVSGKGTTGSPAAESSSSGCPQNADGTFCWM
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
SPDIGQAWASGFIGSGVSINVSDDFTGQPIDGDLGRGTQRQRHGDWVAQIAGMVAPGANI
CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE
FKYNYLEESSIVLQDGLNVINASYGMWEPLSQHPREQAIVGAAWAGTAIVTKSADNHSRE
EEEEECCCCCEEHHCCCHHEECCCCCCCCHHHCCHHHHEEEEECCCCEEEEECCCCCHHH
VGQPHVGDFDELTIGLIGAPSAVFVGALEHNGTPENKARLEPYSNYAGSNPEVQNHFLTV
CCCCCCCCHHHEEEEEECCCHHHEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GVEREEIGQRGTSFAAPVVAGYAAILGSKFTSATPIQITNQLLDTARTDTLVNYNPAAYG
ECCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCC
RGEASLSRALAPVSIH
CCHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA