| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396837
Identifier: 150396837
GI number: 150396837
Start: 1724202
End: 1724864
Strand: Reverse
Name: 150396837
Synonym: Smed_1631
Alternate gene names: NA
Gene position: 1724864-1724202 (Counterclockwise)
Preceding gene: 150396840
Following gene: 150396836
Centisome position: 45.61
GC content: 55.96
Gene sequence:
>663_bases TTGAAGGACGGGGGCGACTGGTTGCGATTGAACACGTTGTGCGTTGGCGGCCATGCGTCTGAGGCAAGGGCTTGGCCGCT CAAACGATGGGCGTTGCAGATGCCCATTGAGACGACGGTGGGTTTCGTCCTGTTCGTGATGGCATTCTTCGTCAGCGCGA TGACTGCGAAAGGACACGAGACCAGCCTTGTCGGCATTTACCAGGGTTCGGAGCTAACCGCCACCGCCGATCATCTGGGA CAAGGCGGATACGAGCTGTCGGATGGCACCCTGGTGTCTTTTGACAAGTGGTACCATAGCAATTGGACCGACATGCGATT TGAAATGTTGACGCAGCTGTCGGACGATTTCGGTATCCTGTGGGGCGCGAGCACCGGTCAGCGTGCCGAAAAGGTCCGAA TCGAGCCGAGTGTGAAACTCGGCTTTATTTTGCAAAAGCGACCGACAGCATCCACGACGCTTTCTCTCACCGTCAGTTCA ATTTTGGGCGGGAACCTGACGGAACGACCTTGCACAGCTGACTATGGTGCCATCAGCGGTGAGCAGAGTGTGAATTGCCG GCTGGCCGCGTCGCAATTGCGGCCCTCGGACACGTTGAAATACATGATAAACCTCGAGCCAAGCCGATTGAAAATCGATC TTCGGTTCACGGGTGAATTCTAG
Upstream 100 bases:
>100_bases ACAAATGTACAACCGTTTCCTTGGCGCCGTCCTCTAGATTGGCATGAAGGTTGCGGCGGTGCGATGCTGCCGGACAGAGT GAAGAGATGGCTCGGCAAAA
Downstream 100 bases:
>100_bases CGATGGTGAAAGGCAAGGCGGTAGATTTCGTTGATGAAGAACAATCAGACAGGAGATTTTTTATGCACAAAACGCAATGG TTCCCGGTAGGTTTTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKDGGDWLRLNTLCVGGHASEARAWPLKRWALQMPIETTVGFVLFVMAFFVSAMTAKGHETSLVGIYQGSELTATADHLG QGGYELSDGTLVSFDKWYHSNWTDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPSVKLGFILQKRPTASTTLSLTVSS ILGGNLTERPCTADYGAISGEQSVNCRLAASQLRPSDTLKYMINLEPSRLKIDLRFTGEF
Sequences:
>Translated_220_residues MKDGGDWLRLNTLCVGGHASEARAWPLKRWALQMPIETTVGFVLFVMAFFVSAMTAKGHETSLVGIYQGSELTATADHLG QGGYELSDGTLVSFDKWYHSNWTDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPSVKLGFILQKRPTASTTLSLTVSS ILGGNLTERPCTADYGAISGEQSVNCRLAASQLRPSDTLKYMINLEPSRLKIDLRFTGEF >Mature_220_residues MKDGGDWLRLNTLCVGGHASEARAWPLKRWALQMPIETTVGFVLFVMAFFVSAMTAKGHETSLVGIYQGSELTATADHLG QGGYELSDGTLVSFDKWYHSNWTDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPSVKLGFILQKRPTASTTLSLTVSS ILGGNLTERPCTADYGAISGEQSVNCRLAASQLRPSDTLKYMINLEPSRLKIDLRFTGEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24280; Mature: 24280
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDGGDWLRLNTLCVGGHASEARAWPLKRWALQMPIETTVGFVLFVMAFFVSAMTAKGHE CCCCCCEEEEEEEEECCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCC TSLVGIYQGSELTATADHLGQGGYELSDGTLVSFDKWYHSNWTDMRFEMLTQLSDDFGIL CEEEEEEECCCEEEEHHHHCCCCEEECCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCEEE WGASTGQRAEKVRIEPSVKLGFILQKRPTASTTLSLTVSSILGGNLTERPCTADYGAISG EECCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCC EQSVNCRLAASQLRPSDTLKYMINLEPSRLKIDLRFTGEF CCCCEEEEEHHHCCCCCCEEEEEEECCCEEEEEEEECCCC >Mature Secondary Structure MKDGGDWLRLNTLCVGGHASEARAWPLKRWALQMPIETTVGFVLFVMAFFVSAMTAKGHE CCCCCCEEEEEEEEECCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCC TSLVGIYQGSELTATADHLGQGGYELSDGTLVSFDKWYHSNWTDMRFEMLTQLSDDFGIL CEEEEEEECCCEEEEHHHHCCCCEEECCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCEEE WGASTGQRAEKVRIEPSVKLGFILQKRPTASTTLSLTVSSILGGNLTERPCTADYGAISG EECCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCC EQSVNCRLAASQLRPSDTLKYMINLEPSRLKIDLRFTGEF CCCCEEEEEHHHCCCCCCEEEEEEECCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA