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The map label for this gene is yadH [H]

Identifier: 150396816

GI number: 150396816

Start: 1701998

End: 1702759

Strand: Reverse

Name: yadH [H]

Synonym: Smed_1607

Alternate gene names: 150396816

Gene position: 1702759-1701998 (Counterclockwise)

Preceding gene: 150396817

Following gene: 150396812

Centisome position: 45.02

GC content: 54.86

Gene sequence:

>762_bases
ATGAACATCGAGGCAGTCAAATCGATCTATTTCTTCGAAATGGCGCGCACGCGACGCACGCTCCTTCAAAGCGTGGTGTC
GCCGGTCATCTCCACCTCGCTTTACTTCATCGTCTTTGGTGCTGCCATCGGCACGCGCATCCAGGAGATAGACGGAATTT
CTTACGGCGCCTTCATCACGCCCGGTCTCATGATGCTGACCTTGTTGACCCAATGCATCGGCAACGGTTCCTTCGGCATC
TATTTCCCGAAATTCACGGGCACCATCTATGAGGTGCTTTCGTCACCGATATCCATGCTGGAAATCGTGCTCGGTTATGT
CGGGGCGGCGGCCACGAAGGGATTGATGATCGGTACGATCATCCTCATCACCGCCTCGCTGTTCGTGGATCTCAGCATCG
CCCATCCCTTCGTGATGCTCTTCTTCTTTGTTCTGACCGCGGTGACCTTCAGCCTGTTTGGCTTCCTCATCGGCATATGG
GCGAAGGACTTCGAGCAGTTGAATCTCATCCCGATGCTGGTGATTCCGCCGCTCGTCTTTCTCGGCGGCAGCTTCTACTC
GATCGATATGCTGCCGCCATTCTGGCGGGCAGTAAGCCACTTCAATCCGGTTCTCTATCTGATCAGTGGATTTCGCTGGA
GCTTCTTCGAGATTTCCGACGTCAATCCGCTCGCCAGCGCGGCGATCATCCTCGTCTTTCTCGCTCTGTGTATGTCCGCT
CTGACGTGGATTTTTCGCACCGGATACAAGCTGCGCAGTTGA

Upstream 100 bases:

>100_bases
TGCTCGCAGCAATGGCCGAGGCGGGCTTGAGGCTCAAAGACATTTCCACGAGACAGAGTTCGCTCGAGGATATCTTCGTT
GAAATCGTGGAGGCGGGGCG

Downstream 100 bases:

>100_bases
CTACGCGCTAATCCCTGAGCGGCAGTTCGTCGCTGCGCATCTGCAGGAAATCGAGCGTCGACAGAAAACTCATGCCGAGC
AGGCTGCTGTCAAGCCGCCC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNIEAVKSIYFFEMARTRRTLLQSVVSPVISTSLYFIVFGAAIGTRIQEIDGISYGAFITPGLMMLTLLTQCIGNGSFGI
YFPKFTGTIYEVLSSPISMLEIVLGYVGAAATKGLMIGTIILITASLFVDLSIAHPFVMLFFFVLTAVTFSLFGFLIGIW
AKDFEQLNLIPMLVIPPLVFLGGSFYSIDMLPPFWRAVSHFNPVLYLISGFRWSFFEISDVNPLASAAIILVFLALCMSA
LTWIFRTGYKLRS

Sequences:

>Translated_253_residues
MNIEAVKSIYFFEMARTRRTLLQSVVSPVISTSLYFIVFGAAIGTRIQEIDGISYGAFITPGLMMLTLLTQCIGNGSFGI
YFPKFTGTIYEVLSSPISMLEIVLGYVGAAATKGLMIGTIILITASLFVDLSIAHPFVMLFFFVLTAVTFSLFGFLIGIW
AKDFEQLNLIPMLVIPPLVFLGGSFYSIDMLPPFWRAVSHFNPVLYLISGFRWSFFEISDVNPLASAAIILVFLALCMSA
LTWIFRTGYKLRS
>Mature_253_residues
MNIEAVKSIYFFEMARTRRTLLQSVVSPVISTSLYFIVFGAAIGTRIQEIDGISYGAFITPGLMMLTLLTQCIGNGSFGI
YFPKFTGTIYEVLSSPISMLEIVLGYVGAAATKGLMIGTIILITASLFVDLSIAHPFVMLFFFVLTAVTFSLFGFLIGIW
AKDFEQLNLIPMLVIPPLVFLGGSFYSIDMLPPFWRAVSHFNPVLYLISGFRWSFFEISDVNPLASAAIILVFLALCMSA
LTWIFRTGYKLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=250, Percent_Identity=40.8, Blast_Score=188, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28053; Mature: 28053

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEAVKSIYFFEMARTRRTLLQSVVSPVISTSLYFIVFGAAIGTRIQEIDGISYGAFIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLMMLTLLTQCIGNGSFGIYFPKFTGTIYEVLSSPISMLEIVLGYVGAAATKGLMIGTI
HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ILITASLFVDLSIAHPFVMLFFFVLTAVTFSLFGFLIGIWAKDFEQLNLIPMLVIPPLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGGSFYSIDMLPPFWRAVSHFNPVLYLISGFRWSFFEISDVNPLASAAIILVFLALCMSA
HCCCEEEECCCCHHHHHHHHCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
LTWIFRTGYKLRS
HHHHHHCCCCCCC
>Mature Secondary Structure
MNIEAVKSIYFFEMARTRRTLLQSVVSPVISTSLYFIVFGAAIGTRIQEIDGISYGAFIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLMMLTLLTQCIGNGSFGIYFPKFTGTIYEVLSSPISMLEIVLGYVGAAATKGLMIGTI
HHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ILITASLFVDLSIAHPFVMLFFFVLTAVTFSLFGFLIGIWAKDFEQLNLIPMLVIPPLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LGGSFYSIDMLPPFWRAVSHFNPVLYLISGFRWSFFEISDVNPLASAAIILVFLALCMSA
HCCCEEEECCCCHHHHHHHHCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
LTWIFRTGYKLRS
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]