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The map label for this gene is nocM [H]

Identifier: 150396799

GI number: 150396799

Start: 1688051

End: 1688881

Strand: Direct

Name: nocM [H]

Synonym: Smed_1590

Alternate gene names: 150396799

Gene position: 1688051-1688881 (Clockwise)

Preceding gene: 150396798

Following gene: 150396800

Centisome position: 44.63

GC content: 61.61

Gene sequence:

>831_bases
GTGAGCATTGCCGAAACCATGATTCCGCCGCAGGCTCCGCCCCCCGCCCCGCCGAGGCCCTACACATTTTCGCGCTTCTT
CGGCAGCGTCGCGCTCGGCATCTGGCTTGCGCTCGGCGTCGGCATTTTCCTGACCGTCGTCAATGGCTGGGATCCGGAGA
AGTTCTCCCGCTACGCACCGAACTTCCTGTCCGGCCTAGGGGTGACGCTGACGCTCGTGACCGCTTCGATTCTCATGGGC
GCCGTCGTTTCGCTGCCGGTCGCGCTCGGGCGCATGTCCAAGAACAGGCTTTGGGGTTGGCTTGCCTATGCCTATGTGTA
TTTCTTCCGTGGCACGCCGCTGATCACCCAGCTCTTTCTCATCTATTACGGGCTTGGCAGTTTCCGACCGCAGCTCGAAA
CCGTGGGCCTTTGGTGGTTCTTCCGCGACGCCTGGAACTGCGCGCTTTTCACCTTCACACTCAACACTGCCGCCTATCAG
GCCGAAATTCTGCGCGGGGCGATCGAGAGCGTGCCGCGCGGCCAACGGGAAGGGGCGGCCGCGCTCGGCCTGCCGGACCG
CATCGCCTTTTTCAAGGTCATTCTGCCCCAGGCGATGATTGTGGCACTGCGCCCGTATGGAAATGAAATCATCCTGATGA
TCAAGGGATCGGCGATCGTAGCGATCGTGACGGTTTTCGACCTCATGGGAGAGACGCGGCGTGCCTTCTCCCGCACCTTC
GATTACCAGATGTATATCTGGGCGGCGATCCTGTACCTGCTGATGGTGGAGTTGCTGCGCAACGTCTGGGGCTGGCTGGA
AGCTCGCCTGACACGCCATCTGAAGCGCTGA

Upstream 100 bases:

>100_bases
TCTTCGGCGTCGCCTGCGTGCTGTTCCTCGTTCTGGCGATGATTTCCTCCATCGTATTCTCCGCCCTCGAGCGCTCGACC
AAACGCGCGGAGACACGCCG

Downstream 100 bases:

>100_bases
TTGCGCTGTAAGCATGGCGAGCACCAGCCGGAAGCCGGCAGCACTCAAAGGGGTTCGCTGCCAACTATTTGTTTTTGTAG
GGGAACTTCTCTTTTGTCGC

Product: polar amino acid ABC transporter inner membrane subunit

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSIAETMIPPQAPPPAPPRPYTFSRFFGSVALGIWLALGVGIFLTVVNGWDPEKFSRYAPNFLSGLGVTLTLVTASILMG
AVVSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLITQLFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQ
AEILRGAIESVPRGQREGAAALGLPDRIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTF
DYQMYIWAAILYLLMVELLRNVWGWLEARLTRHLKR

Sequences:

>Translated_276_residues
MSIAETMIPPQAPPPAPPRPYTFSRFFGSVALGIWLALGVGIFLTVVNGWDPEKFSRYAPNFLSGLGVTLTLVTASILMG
AVVSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLITQLFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQ
AEILRGAIESVPRGQREGAAALGLPDRIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTF
DYQMYIWAAILYLLMVELLRNVWGWLEARLTRHLKR
>Mature_275_residues
SIAETMIPPQAPPPAPPRPYTFSRFFGSVALGIWLALGVGIFLTVVNGWDPEKFSRYAPNFLSGLGVTLTLVTASILMGA
VVSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLITQLFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQA
EILRGAIESVPRGQREGAAALGLPDRIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTFD
YQMYIWAAILYLLMVELLRNVWGWLEARLTRHLKR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=33.3333333333333, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1788645, Length=213, Percent_Identity=37.0892018779343, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=36.697247706422, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=30.2631578947368, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1786874, Length=207, Percent_Identity=29.951690821256, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082239, Length=213, Percent_Identity=31.4553990610329, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786873, Length=168, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31120; Mature: 30989

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIAETMIPPQAPPPAPPRPYTFSRFFGSVALGIWLALGVGIFLTVVNGWDPEKFSRYAP
CCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
NFLSGLGVTLTLVTASILMGAVVSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLITQLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQREGAA
HHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
ALGLPDRIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTF
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
DYQMYIWAAILYLLMVELLRNVWGWLEARLTRHLKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]