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The map label for this gene is nocQ [H]

Identifier: 150396798

GI number: 150396798

Start: 1687251

End: 1688054

Strand: Direct

Name: nocQ [H]

Synonym: Smed_1589

Alternate gene names: 150396798

Gene position: 1687251-1688054 (Clockwise)

Preceding gene: 150396797

Following gene: 150396799

Centisome position: 44.61

GC content: 60.57

Gene sequence:

>804_bases
ATGAGCGGATTGTTTGCCGCCCTTTCCTCCGGTCTTTCCTGGATCGGTGCGATTATCGACCCGCTATGCGGCCCCGCCGG
GGTTTTCCGCTGGTTCGCCTCGGAGACGCTTCTTGCCTGCGGCGACGCGGGTTGGGGCGATGAGATCGCCTATGGCTTCC
TGGTCACCGCCAGCCTAGCGGTCGCAACCCTTCCGGTCGGGCTGGTCATCGGCTTCTTCATTGCGCTCGCCAAGCAATCC
GAGGAGAAATCTCTTCGGCTGGCGGCCAATATCTACACGACGATCTTTCGGGGCTTGCCGGAACTCCTCACGCTCTTCAT
CGTCTATTACGGTCTGCAGATCCTCGTTCAGCAGTTCCTTGCGACCGTCGGCTACGACGGCGCGGTCGAGATCAATGCCT
TCGTAGCAGGGATGATCGCACTCGGAGTTGTCTTTTCGGCCTACTGTTCCGAGGTGCTGTTATCGGCATTCAAAGCCATT
CCGCACGGACAGTATGAGGCCGGTGACGCGCTCGGGCTACACCGTGGCAAGACAATGCGCCTCATCATCCTGCCTCAGCT
CATCCGCGTCGCGCTTCCCGGGCTTGGCAATCTTTGGATGGCGCTGCTGAAGGATACTGCACTCGTCTCGGTCATCGGCC
TACCGGACATTCTTCGGCAAACCGGGATCGCGGCTCGGGTGACCAAGCATGCCTTCGAGTTCTTCGGCGTCGCCTGCGTG
CTGTTCCTCGTTCTGGCGATGATTTCCTCCATCGTATTCTCCGCCCTCGAGCGCTCGACCAAACGCGCGGAGACACGCCG
GTGA

Upstream 100 bases:

>100_bases
TTTGTTTGACAAGGAATCTCGAAAATATGCGTCTGCAGTGCCTCTATCAAAGGTCAAAGCACAGGCTGGGCGCCAAAAAA
CGGGACGGGAAGTTATTGGC

Downstream 100 bases:

>100_bases
GCATTGCCGAAACCATGATTCCGCCGCAGGCTCCGCCCCCCGCCCCGCCGAGGCCCTACACATTTTCGCGCTTCTTCGGC
AGCGTCGCGCTCGGCATCTG

Product: polar amino acid ABC transporter inner membrane subunit

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSGLFAALSSGLSWIGAIIDPLCGPAGVFRWFASETLLACGDAGWGDEIAYGFLVTASLAVATLPVGLVIGFFIALAKQS
EEKSLRLAANIYTTIFRGLPELLTLFIVYYGLQILVQQFLATVGYDGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAI
PHGQYEAGDALGLHRGKTMRLIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAFEFFGVACV
LFLVLAMISSIVFSALERSTKRAETRR

Sequences:

>Translated_267_residues
MSGLFAALSSGLSWIGAIIDPLCGPAGVFRWFASETLLACGDAGWGDEIAYGFLVTASLAVATLPVGLVIGFFIALAKQS
EEKSLRLAANIYTTIFRGLPELLTLFIVYYGLQILVQQFLATVGYDGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAI
PHGQYEAGDALGLHRGKTMRLIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAFEFFGVACV
LFLVLAMISSIVFSALERSTKRAETRR
>Mature_266_residues
SGLFAALSSGLSWIGAIIDPLCGPAGVFRWFASETLLACGDAGWGDEIAYGFLVTASLAVATLPVGLVIGFFIALAKQSE
EKSLRLAANIYTTIFRGLPELLTLFIVYYGLQILVQQFLATVGYDGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIP
HGQYEAGDALGLHRGKTMRLIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAFEFFGVACVL
FLVLAMISSIVFSALERSTKRAETRR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=38.6666666666667, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=36.1607142857143, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=33.9712918660287, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=30.5936073059361, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=29.951690821256, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87082239, Length=214, Percent_Identity=29.9065420560748, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786874, Length=219, Percent_Identity=26.027397260274, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI48994930, Length=139, Percent_Identity=30.2158273381295, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28564; Mature: 28433

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGLFAALSSGLSWIGAIIDPLCGPAGVFRWFASETLLACGDAGWGDEIAYGFLVTASLA
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VATLPVGLVIGFFIALAKQSEEKSLRLAANIYTTIFRGLPELLTLFIVYYGLQILVQQFL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVGYDGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDALGLHRGKTMR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEE
LIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAFEFFGVACV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHH
LFLVLAMISSIVFSALERSTKRAETRR
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]