| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396778
Identifier: 150396778
GI number: 150396778
Start: 1666193
End: 1666600
Strand: Reverse
Name: 150396778
Synonym: Smed_1569
Alternate gene names: NA
Gene position: 1666600-1666193 (Counterclockwise)
Preceding gene: 150396779
Following gene: 150396775
Centisome position: 44.07
GC content: 60.54
Gene sequence:
>408_bases ATGACGAAAACAAACGAGGGCGGCTGCCTTTGCGGTGCGGTGCGGTTCAAAACGCGCGGCAGGCTGCGCGAAGTGATCTT CTGCCACTGCTCGCAGTGCCGGAAGCAAACCGGACTCTATTACGCAGCCACCAATGTTCTCGACAGCGACATTGAAGTGA ACGGCTCCGACGAGGTGACCTGGTACCGGTCCAGCGACGATGCCAAGCGCGGTTTTTGCCGAAATTGCGGTTCGGCCCTG TTCTGGAAAGCGGACGGCCTGGACTACACGTCCATTCTTGCCGGTACCTTCGATGGGGCGGGAGCTCTGGAGCCCGGCTA TCACATCTACTGTGCGGACAAGGGGGATTACTACGATATTTGCGACGACCTGCCGCGCTTCCCGGGGGCGAGGCCGCAGC CGTCATGA
Upstream 100 bases:
>100_bases CGTTCGGGCTGACGCCTGGATGTCGCGGTCGACAACCGATCGCCGCCGGCTCGTCCTAAACGTGAACGAAAGACATATGC ATGGTGAGTGGAGAGGGCAG
Downstream 100 bases:
>100_bases ACGTGATTCAATAAAGTAGAGCGGGATGCGGGCGGGAAGCCGCGCACACTTTTCCTCATCCGGCCCTAGAGCGACAGCTC GGTGGCCTGATCGAAGGCGC
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutamate Synthase; ADP-Ribosylglycohydrolase Family Protein; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Gfa
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTKTNEGGCLCGAVRFKTRGRLREVIFCHCSQCRKQTGLYYAATNVLDSDIEVNGSDEVTWYRSSDDAKRGFCRNCGSAL FWKADGLDYTSILAGTFDGAGALEPGYHIYCADKGDYYDICDDLPRFPGARPQPS
Sequences:
>Translated_135_residues MTKTNEGGCLCGAVRFKTRGRLREVIFCHCSQCRKQTGLYYAATNVLDSDIEVNGSDEVTWYRSSDDAKRGFCRNCGSAL FWKADGLDYTSILAGTFDGAGALEPGYHIYCADKGDYYDICDDLPRFPGARPQPS >Mature_134_residues TKTNEGGCLCGAVRFKTRGRLREVIFCHCSQCRKQTGLYYAATNVLDSDIEVNGSDEVTWYRSSDDAKRGFCRNCGSALF WKADGLDYTSILAGTFDGAGALEPGYHIYCADKGDYYDICDDLPRFPGARPQPS
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14935; Mature: 14804
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTNEGGCLCGAVRFKTRGRLREVIFCHCSQCRKQTGLYYAATNVLDSDIEVNGSDEVT CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCEE WYRSSDDAKRGFCRNCGSALFWKADGLDYTSILAGTFDGAGALEPGYHIYCADKGDYYDI EEECCCCHHHHHHHCCCCEEEEECCCCCHHHHEEECCCCCCCCCCCCEEEECCCCCEECH CDDLPRFPGARPQPS HHHHHCCCCCCCCCC >Mature Secondary Structure TKTNEGGCLCGAVRFKTRGRLREVIFCHCSQCRKQTGLYYAATNVLDSDIEVNGSDEVT CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCEE WYRSSDDAKRGFCRNCGSALFWKADGLDYTSILAGTFDGAGALEPGYHIYCADKGDYYDI EEECCCCHHHHHHHCCCCEEEEECCCCCHHHHEEECCCCCCCCCCCCEEEECCCCCEECH CDDLPRFPGARPQPS HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA