Click here to switch to the map view.

The map label for this gene is aroH [H]

Identifier: 150396779

GI number: 150396779

Start: 1666800

End: 1668173

Strand: Reverse

Name: aroH [H]

Synonym: Smed_1570

Alternate gene names: 150396779

Gene position: 1668173-1666800 (Counterclockwise)

Preceding gene: 150396780

Following gene: 150396778

Centisome position: 44.11

GC content: 62.3

Gene sequence:

>1374_bases
ATGGCACAGACTTGGACTCCGAACAGCTGGCGGCAAAAACCCATTCAGCAGGTGCCGGATTATCCGGACCTCGCAGCGCT
CGACAGCGTGGAAGCGCGTCTTGCCAAATATCCGCCGCTTGTCTTTGCAGGAGAGGCGCGCCGTCTGAAGAGTGCGCTTG
CCAATGTCGCCGACGGCCGTGGTTTTCTGCTGCAGGGGGGCGATTGCGCCGAGAGCTTTGCCGAACACGGCGCCGATACG
ATCCGGGACTTCTTCCGCGCCTTCCTGCAGATGGCCGTCGTCCTGACCTTCGGGGCGCAGCAACCGGTCGTCAAGGTCGG
CCGTATTGCCGGCCAATTCGCCAAGCCGCGCTCCTCGGGTATCGAGAAGCAGGGTGACGTATCGCTGCCGAGCTACCGCG
GCGACATCATCAACGGGATCGAGTTCACGGAGGAGGCACGCGTGCCCAATCCGGAGCGCCAGGTCATGGCCTATCGCCAG
TCCGCGGCTACGCTCAACCTGCTTCGTGCCTTTGCCATGGGTGGTTACGCCAACCTGGAAAACGTCCATCAATGGATGCT
CGGTTTCGTCAAGGACAGCCCGCAGGCGGAGCGTTATCGCAAGCTTGCCGACCGGATCTCCGAGACGATGGATTTCATGA
AGGCGATCGGCATTACCGCCGAAAACCATCCGAGCCTGCGCGAAACGGATTTCTTCACCAGCCACGAGGCGTTGCTGCTT
GGGTACGAGCAGGCGCTCACGCGCGTCGATTCCACCTCAGGCGACTGGTACGCGACGTCGGGCCATATGATCTGGATCGG
AGATCGCACGCGCCAGCCGGATCATGCGCATATCGAGTATTGCCGTGGCATCAAGAATCCGCTCGGCCTGAAGTGCGGTC
CGTCGCTGACGGCGGACGGACTTCTCGAACTTATCGACATCCTCAATCCGGCGAACGAGGCGGGACGGCTTACGCTGATC
TGCCGCTTCGGGCACGACAAGGTCGCCGAGCATCTGCCGCGCCTCATCCGCGCCGTCGAGCGGGAGGGCAAGAAGGTGGT
GTGGTCCTGCGATCCGATGCACGGCAACACGATCACGCTCAACAATTACAAGACCCGGCCGTTCGAGCGTATCCTGTCGG
AAGTCGAGAGCTTCTTTCAGATTCATCGCGCCGAGGGCTCGCATCCCGGCGGCATCCATATCGAAATGACCGGCAACGAC
GTGACGGAATGCACCGGCGGTGCACGCGCGCTTTCCGGCGACGACCTTGCCGACCGCTACCACACGCATTGCGATCCGCG
CCTCAATGCCGATCAGGCACTCGAGCTTGCCTTCCTGCTCGCCGAGCGCATGAAGGGCGGCCGCGACGAGAAGAAGATGG
TGGTGAACGGCTGA

Upstream 100 bases:

>100_bases
GGGCTGGCGGCGCGGACGCATGCAAATCCGGATGCCGGGCGGCGGGACAGTCGCAGGGGCGGGACGCGGGCCGATCCGCG
TCAGACAACAGGTGATGGAA

Downstream 100 bases:

>100_bases
TCGCTCCAACGAACCGTCGTTCAATATTTCTGAACCTGCGGCGCATCGTCTGAATTTGACAAAGGCCGGACCAGCTTGAA
AGCTGGTCCGGCCTTTTCAC

Product: phospho-2-dehydro-3-deoxyheptonate aldolase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAQTWTPNSWRQKPIQQVPDYPDLAALDSVEARLAKYPPLVFAGEARRLKSALANVADGRGFLLQGGDCAESFAEHGADT
IRDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSGIEKQGDVSLPSYRGDIINGIEFTEEARVPNPERQVMAYRQ
SAATLNLLRAFAMGGYANLENVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLL
GYEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADGLLELIDILNPANEAGRLTLI
CRFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITLNNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGND
VTECTGGARALSGDDLADRYHTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG

Sequences:

>Translated_457_residues
MAQTWTPNSWRQKPIQQVPDYPDLAALDSVEARLAKYPPLVFAGEARRLKSALANVADGRGFLLQGGDCAESFAEHGADT
IRDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSGIEKQGDVSLPSYRGDIINGIEFTEEARVPNPERQVMAYRQ
SAATLNLLRAFAMGGYANLENVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLL
GYEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADGLLELIDILNPANEAGRLTLI
CRFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITLNNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGND
VTECTGGARALSGDDLADRYHTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG
>Mature_456_residues
AQTWTPNSWRQKPIQQVPDYPDLAALDSVEARLAKYPPLVFAGEARRLKSALANVADGRGFLLQGGDCAESFAEHGADTI
RDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSGIEKQGDVSLPSYRGDIINGIEFTEEARVPNPERQVMAYRQS
AATLNLLRAFAMGGYANLENVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLLG
YEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADGLLELIDILNPANEAGRLTLIC
RFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITLNNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGNDV
TECTGGARALSGDDLADRYHTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG

Specific function: Unknown

COG id: COG3200

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II DAHP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002480 [H]

Pfam domain/function: PF01474 DAHP_synth_2 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 50833; Mature: 50702

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTWTPNSWRQKPIQQVPDYPDLAALDSVEARLAKYPPLVFAGEARRLKSALANVADGR
CCCCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCC
GFLLQGGDCAESFAEHGADTIRDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSG
EEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCC
IEKQGDVSLPSYRGDIINGIEFTEEARVPNPERQVMAYRQSAATLNLLRAFAMGGYANLE
CCCCCCCCCCCCCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
NVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
GYEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADG
HHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHH
LLELIDILNPANEAGRLTLICRFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITL
HHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE
NNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGNDVTECTGGARALSGDDLADRY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHHH
HTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG
HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCC
>Mature Secondary Structure 
AQTWTPNSWRQKPIQQVPDYPDLAALDSVEARLAKYPPLVFAGEARRLKSALANVADGR
CCCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCC
GFLLQGGDCAESFAEHGADTIRDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSG
EEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCC
IEKQGDVSLPSYRGDIINGIEFTEEARVPNPERQVMAYRQSAATLNLLRAFAMGGYANLE
CCCCCCCCCCCCCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
NVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
GYEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADG
HHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHH
LLELIDILNPANEAGRLTLICRFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITL
HHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE
NNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGNDVTECTGGARALSGDDLADRY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHHH
HTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG
HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953; 8760910 [H]