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The map label for this gene is yrbE [C]

Identifier: 150396764

GI number: 150396764

Start: 1646059

End: 1647198

Strand: Reverse

Name: yrbE [C]

Synonym: Smed_1554

Alternate gene names: 150396764

Gene position: 1647198-1646059 (Counterclockwise)

Preceding gene: 150396766

Following gene: 150396763

Centisome position: 43.55

GC content: 62.37

Gene sequence:

>1140_bases
GTGACGCCTGCCCAAACAGAGACCGCTGCCGACGTCGTCGTCGATGAGGGCGCCGCCGGAAACGGTCGGCGTTATGTGTT
CAGCGGCGACTGGAGGCATGAGACGGCCGAGGCGATGAGTGCCAAGCTGAAGCGGCTTGGAAAACCGGCCGGCGGGCAGA
GCGAGTTCGATTTCTCCGGCATCACGGCAATGGATACGGCTGGTGCGTGGATCATTCGTCGATTCATGAACGGGACCGCC
GACGAGGTTCGTTTCGCAGGCAGCGACCGGTATGCCGAACTGATCCTCGCACTGCCGAAGCAATTGCGCAGCCCGGAAGG
GGAGACGGCACGAGCACCACTCTTCCAGCGGCTGTTTGCGCCTGTAGGTGAGCTGACGGTTTCCATATGGACCGACACCG
TCGCGGCCATGTACATTCTGGGATCAGCGGTTCGCGGCGCTCAGATGAAGCTTGGGCGCCATGCGGGCGTTTCACCCGCT
GCGATCGTCCATCAGATCGACCGGATGGGCGTGATGGCGACGCCGATCATCACCCTGATGTCCTTCCTGATCGGTGCCAT
CATCGCGCAGCAGGGCGCATTCCAGCTCCGCTCCTTCGGCGCCGAAATCTTCGTCGTCGACCTCGTCGGCATCCTGCAAC
TGCGCGAGATCGGCGTGTTGCTTACAGCGATCATGATCGCCGGGCGATCGGGAAGTGCGATTACCGCCGAGATAGGCTCG
ATGAAGATGCGCGAAGAGGTCGACGCGCTCAAAGTCATGGGCTTGAGCCCGATCGGCGTTCTCGTCTTTCCGCGCCTCGT
GGCCCTGACGATCGTCCTGCCGCTCCTGACGATCATCGCGAACTTCGCCGCCCTTGCCGGCGCCGCCATGGTGGCCTGGG
CCTATTCCGGCATCACGATTCCGACTTTCCTGGCGCGTTTGCAGGAGGCGGTCGATTTCTCTTCCGTCGCGGCCGGCATG
ATCAAGGCACCCTTCATGGCGCTCATCATCGGCGTCGTTGCCGCGGTCGAAGGATTGAAGGTCGGCGGCAGTGCCGAGTC
GCTTGGGCGGCGGGTGACCTCGTCCGTCGTCAAGTCGATATTCGTCGTGATCCTGATCGACGGACTGTTCGCCATATTCT
ACGCGGCAATCGATTTCTGA

Upstream 100 bases:

>100_bases
CAAGGGCACTGTACGACTTTGAATTCCCGCATGATTTTGTCATCGAGCGGAATCTCGTTTAAGAGAGTATGCAGAGAACC
AACTGAAAGACCGATATCAC

Downstream 100 bases:

>100_bases
GGTGGCGAACATGGTTCAGGCAGTCATCGGCAAGCAAGCGGATGCGGGGGGGAAGGGGCAGGCGGTCCTTTCCGTTCGCG
ACCTTACGGTCGGATTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTPAQTETAADVVVDEGAAGNGRRYVFSGDWRHETAEAMSAKLKRLGKPAGGQSEFDFSGITAMDTAGAWIIRRFMNGTA
DEVRFAGSDRYAELILALPKQLRSPEGETARAPLFQRLFAPVGELTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSPA
AIVHQIDRMGVMATPIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGS
MKMREEVDALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARLQEAVDFSSVAAGM
IKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILIDGLFAIFYAAIDF

Sequences:

>Translated_379_residues
MTPAQTETAADVVVDEGAAGNGRRYVFSGDWRHETAEAMSAKLKRLGKPAGGQSEFDFSGITAMDTAGAWIIRRFMNGTA
DEVRFAGSDRYAELILALPKQLRSPEGETARAPLFQRLFAPVGELTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSPA
AIVHQIDRMGVMATPIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGS
MKMREEVDALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARLQEAVDFSSVAAGM
IKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILIDGLFAIFYAAIDF
>Mature_378_residues
TPAQTETAADVVVDEGAAGNGRRYVFSGDWRHETAEAMSAKLKRLGKPAGGQSEFDFSGITAMDTAGAWIIRRFMNGTAD
EVRFAGSDRYAELILALPKQLRSPEGETARAPLFQRLFAPVGELTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSPAA
IVHQIDRMGVMATPIITLMSFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGSM
KMREEVDALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITIPTFLARLQEAVDFSSVAAGMI
KAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSIFVVILIDGLFAIFYAAIDF

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=207, Percent_Identity=31.4009661835749, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40067; Mature: 39935

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAQTETAADVVVDEGAAGNGRRYVFSGDWRHETAEAMSAKLKRLGKPAGGQSEFDFSG
CCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ITAMDTAGAWIIRRFMNGTADEVRFAGSDRYAELILALPKQLRSPEGETARAPLFQRLFA
CCHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
PVGELTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSPAAIVHQIDRMGVMATPIITLM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
SFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGS
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
MKMREEVDALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PTFLARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FVVILIDGLFAIFYAAIDF
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPAQTETAADVVVDEGAAGNGRRYVFSGDWRHETAEAMSAKLKRLGKPAGGQSEFDFSG
CCCCCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ITAMDTAGAWIIRRFMNGTADEVRFAGSDRYAELILALPKQLRSPEGETARAPLFQRLFA
CCHHHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
PVGELTVSIWTDTVAAMYILGSAVRGAQMKLGRHAGVSPAAIVHQIDRMGVMATPIITLM
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
SFLIGAIIAQQGAFQLRSFGAEIFVVDLVGILQLREIGVLLTAIMIAGRSGSAITAEIGS
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
MKMREEVDALKVMGLSPIGVLVFPRLVALTIVLPLLTIIANFAALAGAAMVAWAYSGITI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PTFLARLQEAVDFSSVAAGMIKAPFMALIIGVVAAVEGLKVGGSAESLGRRVTSSVVKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FVVILIDGLFAIFYAAIDF
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA