| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is deaD [H]
Identifier: 150396691
GI number: 150396691
Start: 1564858
End: 1566357
Strand: Direct
Name: deaD [H]
Synonym: Smed_1478
Alternate gene names: 150396691
Gene position: 1564858-1566357 (Clockwise)
Preceding gene: 150396690
Following gene: 150396692
Centisome position: 41.38
GC content: 59.67
Gene sequence:
>1500_bases TTGACCAATTTCGCTGACCTTGGCTTGAGCCAGAAAGTTCTTTCCGCAGTTACCGACGCGGGCTACACGATACCGACACC GATCCAGATTGGTGCAATCCCGCCGGCGCTTCAGCGCCGCGACATTCTCGGCATCGCCCAGACCGGCACCGGCAAGACCG CATCCTTCGTGTTGCCGATGTTGACCCTTCTGGAAAAAGGACGCGCCCGCGCACGGATGCCGCGCACGCTTATACTTGAG CCGACGCGCGAGCTCGCGGCCCAGGTCGCCGAGAATTTCGACAAATACGGCAAGAATCACAAGCTTAACATCGCGCTTCT GATTGGTGGCGTTTCCTTCGACGAGCAGGACCGCAAGCTCGAGCGCGGCGCCGACGTGCTGATTTGTACGCCCGGCCGGC TGCTCGACCACTGCGAGCGTGGCAAGCTTTTGATGTCAGGCGTCGAAATTCTTGTCATCGACGAGGCTGACCGAATGCTC GATATGGGATTCATTCCTGATATCGAACGTATCGCGAAGCTCATTCCCTTTACACGGCAGACCTTGTTCTTCTCAGCCAC GATGCCGCCCGAAATCCAGAAGCTTGCGGATCGCTTTCTGCAGAATCCGGAGCGGGTCGAAGTGGCACGCCGGTCATCGA CAGCCATAACGGTCACGCAGCGTCTCGTGGCAGCGCACGGCAAGGACTACGAAAAGCGAGCCGTCCTCCGTGAGCTCATT CGTTCCCAGGAAGACCTGAAGAACGCGATCATCTTCTGCAATCGCAAGAAGGATGTCGCCGAGCTTTTCCGCTCGCTCGA CCGTCATGGCTTCTCGGTCGGCGCGCTGCACGGCGACATGGATCAGCGGTCGCGCATGGCCATGCTTGCCAATTTCAAGG ACGGCAACATCAAGCTGTTGGTCGCCTCCGATGTCGCGGCGCGCGGGCTCGACATTCCCGACGTGAGCCATGTATTCAAT TTCGACGTGCCGATCCATGCGGAAGACTATGTCCATCGCATCGGACGAACCGGGCGCGCTGGCCGTTCCGGTGCCTCTTT CACAATCGTCACGAAGCGCGACATCAAGTTCGCCGACGCCATCGAAAAGCTGATCGGCCAGGAAGTCGAATGGCACAATG GCGACCTTTCGGAACTGCCCGAACCGATGGAAAGTCACGACAGCCGTCGTGACCGCGGCAGCGACGGGCGCAAGGATCGG AAGAGGGAGCGACCCGTGAAGACCCGCTCCGATCACAAAGCTGTCACGGCCGTAGACAATAATACTGAAGAACTCGAAAC AGTCCCGGAAAGGGTCGACACGGTGAAGATCGAACGCAATGCCGAGAGCAAGGATCGCCATAACGGCCGCAGCGACCGTC CTGGCCGCGCGCAGAATGCGGCTAATGACGACAATCGCGATCGTCGGCAGCGTCACCGCCGCGACCATGACGACGGCCCT ACGCCCGTGGGTTTCGGTGATGACATCCCAGCCTTCATGCTGATCGTCGGCAAGGCCTGA
Upstream 100 bases:
>100_bases ACTTTCGGCGCCTTTGGTCGTATGAGCGCCGCCACATGCTGCTGCATTTTCCCTCGATCGAACAGAGTTCATCAGAACCG GAACGGAAACAGTTTCCCCT
Downstream 100 bases:
>100_bases CCCTTCGCTCATGGCACTGCCCGGTGTTGACTTCCCCGGTCTCGGCTGTGGTCTGGCGATTGTAAGGGATGGAAAAATCC TCCTCTGTCGTCGCCTGAAG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTNFADLGLSQKVLSAVTDAGYTIPTPIQIGAIPPALQRRDILGIAQTGTGKTASFVLPMLTLLEKGRARARMPRTLILE PTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLERGADVLICTPGRLLDHCERGKLLMSGVEILVIDEADRML DMGFIPDIERIAKLIPFTRQTLFFSATMPPEIQKLADRFLQNPERVEVARRSSTAITVTQRLVAAHGKDYEKRAVLRELI RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLVASDVAARGLDIPDVSHVFN FDVPIHAEDYVHRIGRTGRAGRSGASFTIVTKRDIKFADAIEKLIGQEVEWHNGDLSELPEPMESHDSRRDRGSDGRKDR KRERPVKTRSDHKAVTAVDNNTEELETVPERVDTVKIERNAESKDRHNGRSDRPGRAQNAANDDNRDRRQRHRRDHDDGP TPVGFGDDIPAFMLIVGKA
Sequences:
>Translated_499_residues MTNFADLGLSQKVLSAVTDAGYTIPTPIQIGAIPPALQRRDILGIAQTGTGKTASFVLPMLTLLEKGRARARMPRTLILE PTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLERGADVLICTPGRLLDHCERGKLLMSGVEILVIDEADRML DMGFIPDIERIAKLIPFTRQTLFFSATMPPEIQKLADRFLQNPERVEVARRSSTAITVTQRLVAAHGKDYEKRAVLRELI RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLVASDVAARGLDIPDVSHVFN FDVPIHAEDYVHRIGRTGRAGRSGASFTIVTKRDIKFADAIEKLIGQEVEWHNGDLSELPEPMESHDSRRDRGSDGRKDR KRERPVKTRSDHKAVTAVDNNTEELETVPERVDTVKIERNAESKDRHNGRSDRPGRAQNAANDDNRDRRQRHRRDHDDGP TPVGFGDDIPAFMLIVGKA >Mature_498_residues TNFADLGLSQKVLSAVTDAGYTIPTPIQIGAIPPALQRRDILGIAQTGTGKTASFVLPMLTLLEKGRARARMPRTLILEP TRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLERGADVLICTPGRLLDHCERGKLLMSGVEILVIDEADRMLD MGFIPDIERIAKLIPFTRQTLFFSATMPPEIQKLADRFLQNPERVEVARRSSTAITVTQRLVAAHGKDYEKRAVLRELIR SQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLVASDVAARGLDIPDVSHVFNF DVPIHAEDYVHRIGRTGRAGRSGASFTIVTKRDIKFADAIEKLIGQEVEWHNGDLSELPEPMESHDSRRDRGSDGRKDRK RERPVKTRSDHKAVTAVDNNTEELETVPERVDTVKIERNAESKDRHNGRSDRPGRAQNAANDDNRDRRQRHRRDHDDGPT PVGFGDDIPAFMLIVGKA
Specific function: Has a helix-destabilizing activity. Plays a key role in optimal cell growth at low temperature and is required for normal cell division [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=41.5549597855228, Blast_Score=275, Evalue=5e-74, Organism=Homo sapiens, GI45446747, Length=368, Percent_Identity=39.945652173913, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI45446743, Length=368, Percent_Identity=39.945652173913, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI41327771, Length=386, Percent_Identity=38.860103626943, Blast_Score=268, Evalue=8e-72, Organism=Homo sapiens, GI301171467, Length=384, Percent_Identity=39.84375, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI87196351, Length=384, Percent_Identity=39.84375, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI301171475, Length=384, Percent_Identity=39.84375, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI169881239, Length=423, Percent_Identity=37.5886524822695, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI13514809, Length=423, Percent_Identity=37.5886524822695, Blast_Score=266, Evalue=3e-71, Organism=Homo sapiens, GI222352149, Length=398, Percent_Identity=38.4422110552764, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=38.9189189189189, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI148613856, Length=385, Percent_Identity=39.2207792207792, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI38201710, Length=385, Percent_Identity=39.2207792207792, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI4758138, Length=413, Percent_Identity=37.5302663438257, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=40.4255319148936, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI224593278, Length=364, Percent_Identity=39.2857142857143, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=38.3152173913043, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI55749865, Length=396, Percent_Identity=35.6060606060606, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI7661920, Length=378, Percent_Identity=34.9206349206349, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=37.9213483146067, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=38.135593220339, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=37.9213483146067, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=37.9213483146067, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=37.7410468319559, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=39.1666666666667, Blast_Score=231, Evalue=9e-61, Organism=Homo sapiens, GI13129006, Length=362, Percent_Identity=35.9116022099448, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI50659095, Length=364, Percent_Identity=35.989010989011, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI51094101, Length=369, Percent_Identity=33.8753387533875, Blast_Score=211, Evalue=9e-55, Organism=Homo sapiens, GI164419743, Length=369, Percent_Identity=33.8753387533875, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=33.9673913043478, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI188035877, Length=353, Percent_Identity=33.9943342776204, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI6005743, Length=384, Percent_Identity=32.5520833333333, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI8922886, Length=384, Percent_Identity=32.8125, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI38327634, Length=368, Percent_Identity=35.054347826087, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=33.6043360433604, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI4503529, Length=379, Percent_Identity=32.4538258575198, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=32.7868852459016, Blast_Score=189, Evalue=8e-48, Organism=Homo sapiens, GI62241024, Length=345, Percent_Identity=32.7536231884058, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI21040371, Length=386, Percent_Identity=30.3108808290155, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI4758112, Length=386, Percent_Identity=29.5336787564767, Blast_Score=179, Evalue=8e-45, Organism=Homo sapiens, GI18375623, Length=386, Percent_Identity=29.5336787564767, Blast_Score=179, Evalue=8e-45, Organism=Homo sapiens, GI41327779, Length=359, Percent_Identity=33.983286908078, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38569505, Length=366, Percent_Identity=30.8743169398907, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI38569503, Length=366, Percent_Identity=30.8743169398907, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI164419732, Length=344, Percent_Identity=31.6860465116279, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI256223453, Length=391, Percent_Identity=30.1790281329923, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI17505907, Length=414, Percent_Identity=29.951690821256, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=29.6758104738155, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=34.5345345345345, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI256773275, Length=393, Percent_Identity=30.7888040712468, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=31.3099041533546, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI154759257, Length=394, Percent_Identity=26.9035532994924, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=35.7798165137615, Blast_Score=109, Evalue=6e-24, Organism=Escherichia coli, GI1787016, Length=371, Percent_Identity=46.3611859838275, Blast_Score=307, Evalue=1e-84, Organism=Escherichia coli, GI87082221, Length=379, Percent_Identity=44.8548812664908, Blast_Score=305, Evalue=3e-84, Organism=Escherichia coli, GI1790214, Length=390, Percent_Identity=40, Blast_Score=261, Evalue=6e-71, Organism=Escherichia coli, GI1788930, Length=356, Percent_Identity=42.9775280898876, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI1787605, Length=378, Percent_Identity=37.5661375661376, Blast_Score=228, Evalue=5e-61, Organism=Escherichia coli, GI48994977, Length=352, Percent_Identity=23.2954545454545, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=39.7402597402597, Blast_Score=264, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=38.7096774193548, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI86570094, Length=360, Percent_Identity=40.2777777777778, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI17510307, Length=392, Percent_Identity=39.030612244898, Blast_Score=254, Evalue=9e-68, Organism=Caenorhabditis elegans, GI17510309, Length=392, Percent_Identity=39.030612244898, Blast_Score=254, Evalue=1e-67, Organism=Caenorhabditis elegans, GI71995514, Length=392, Percent_Identity=39.030612244898, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI71995718, Length=400, Percent_Identity=37.75, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI115533224, Length=378, Percent_Identity=39.1534391534392, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI17510559, Length=422, Percent_Identity=35.0710900473934, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI71987143, Length=381, Percent_Identity=34.9081364829396, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI71995724, Length=378, Percent_Identity=34.3915343915344, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17507121, Length=378, Percent_Identity=34.1269841269841, Blast_Score=237, Evalue=8e-63, Organism=Caenorhabditis elegans, GI17552642, Length=404, Percent_Identity=35.6435643564356, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17507945, Length=344, Percent_Identity=40.6976744186046, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71999644, Length=381, Percent_Identity=33.8582677165354, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71999646, Length=381, Percent_Identity=33.8582677165354, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=34.3007915567282, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=34.3007915567282, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=34.9295774647887, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=35.2150537634409, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17552114, Length=351, Percent_Identity=33.048433048433, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17537549, Length=378, Percent_Identity=34.1269841269841, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17507881, Length=376, Percent_Identity=34.3085106382979, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=33.0645161290323, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17505370, Length=401, Percent_Identity=31.6708229426434, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71982858, Length=387, Percent_Identity=30.4909560723514, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17508543, Length=412, Percent_Identity=32.0388349514563, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17556951, Length=357, Percent_Identity=30.812324929972, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=31.758530183727, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=31.758530183727, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=31.758530183727, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193208216, Length=402, Percent_Identity=32.3383084577114, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI193206561, Length=359, Percent_Identity=31.1977715877437, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=30.5699481865285, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17553716, Length=375, Percent_Identity=28.8, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=26.4563106796117, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=30.2949061662198, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI71990816, Length=408, Percent_Identity=28.1862745098039, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI25148291, Length=376, Percent_Identity=27.9255319148936, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71997889, Length=400, Percent_Identity=27, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI25148205, Length=338, Percent_Identity=25.4437869822485, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=31.3725490196078, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71987152, Length=113, Percent_Identity=38.9380530973451, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17557982, Length=417, Percent_Identity=23.7410071942446, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=42.0485175202156, Blast_Score=277, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=40.771349862259, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6325138, Length=396, Percent_Identity=38.8888888888889, Blast_Score=256, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6324778, Length=423, Percent_Identity=38.0614657210402, Blast_Score=255, Evalue=9e-69, Organism=Saccharomyces cerevisiae, GI6321360, Length=408, Percent_Identity=36.7647058823529, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=39.4886363636364, Blast_Score=246, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=32.2195704057279, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=34.6883468834688, Blast_Score=216, Evalue=8e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=349, Percent_Identity=36.3896848137536, Blast_Score=216, Evalue=8e-57, Organism=Saccharomyces cerevisiae, GI6320224, Length=382, Percent_Identity=31.9371727748691, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6322912, Length=376, Percent_Identity=34.3085106382979, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6322323, Length=376, Percent_Identity=34.3085106382979, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=35.4166666666667, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=364, Percent_Identity=36.5384615384615, Blast_Score=206, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6319714, Length=390, Percent_Identity=30.7692307692308, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=35.3260869565217, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=32.8877005347594, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=30.8612440191388, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=386, Percent_Identity=32.6424870466321, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320119, Length=388, Percent_Identity=29.3814432989691, Blast_Score=163, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=386, Percent_Identity=29.2746113989637, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6321111, Length=352, Percent_Identity=30.9659090909091, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=417, Percent_Identity=26.6187050359712, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=436, Percent_Identity=27.2935779816514, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=404, Percent_Identity=26.980198019802, Blast_Score=123, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6321374, Length=424, Percent_Identity=25.9433962264151, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323844, Length=347, Percent_Identity=23.342939481268, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17985987, Length=416, Percent_Identity=40.3846153846154, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24585582, Length=380, Percent_Identity=37.6315789473684, Blast_Score=266, Evalue=3e-71, Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=37.8590078328982, Blast_Score=266, Evalue=3e-71, Organism=Drosophila melanogaster, GI28574962, Length=366, Percent_Identity=39.8907103825137, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=38.7978142076503, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI21355075, Length=361, Percent_Identity=39.8891966759003, Blast_Score=262, Evalue=4e-70, Organism=Drosophila melanogaster, GI24662330, Length=412, Percent_Identity=37.8640776699029, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=40.5099150141643, Blast_Score=251, Evalue=7e-67, Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=37.431693989071, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=37.431693989071, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=37.431693989071, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=37.431693989071, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=37.431693989071, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=37.431693989071, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=37.431693989071, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI21356161, Length=367, Percent_Identity=38.9645776566758, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=37.1273712737127, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24645031, Length=378, Percent_Identity=34.1269841269841, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI17977678, Length=361, Percent_Identity=36.8421052631579, Blast_Score=228, Evalue=9e-60, Organism=Drosophila melanogaster, GI24582080, Length=377, Percent_Identity=34.4827586206897, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24582078, Length=377, Percent_Identity=34.4827586206897, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17136248, Length=377, Percent_Identity=34.4827586206897, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24582075, Length=377, Percent_Identity=34.4827586206897, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI28575014, Length=352, Percent_Identity=33.2386363636364, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=39.5498392282958, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI17136814, Length=384, Percent_Identity=36.4583333333333, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=35.2, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI28571808, Length=369, Percent_Identity=34.4173441734417, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI28571809, Length=369, Percent_Identity=34.4173441734417, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=31.8801089918256, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=31.8801089918256, Blast_Score=195, Evalue=7e-50, Organism=Drosophila melanogaster, GI24581954, Length=386, Percent_Identity=30.5699481865285, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24581952, Length=386, Percent_Identity=30.5699481865285, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24581956, Length=386, Percent_Identity=30.5699481865285, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24666101, Length=354, Percent_Identity=34.7457627118644, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI21355559, Length=380, Percent_Identity=32.3684210526316, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24643725, Length=438, Percent_Identity=27.1689497716895, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI17647335, Length=390, Percent_Identity=28.4615384615385, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI20130173, Length=321, Percent_Identity=31.7757009345794, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24668515, Length=356, Percent_Identity=30.6179775280899, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI17136666, Length=475, Percent_Identity=27.5789473684211, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI19920478, Length=366, Percent_Identity=30.8743169398907, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24640164, Length=392, Percent_Identity=25.2551020408163, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI28571338, Length=206, Percent_Identity=32.5242718446602, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI18859659, Length=206, Percent_Identity=32.5242718446602, Blast_Score=111, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021046 - InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF12343 DEADboxA; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 55903; Mature: 55772
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFADLGLSQKVLSAVTDAGYTIPTPIQIGAIPPALQRRDILGIAQTGTGKTASFVLPM CCCCHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCCEEEECCCCCCHHHHHHHH LTLLEKGRARARMPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKL HHHHHCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHH ERGADVLICTPGRLLDHCERGKLLMSGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQ HCCCCEEEECCCHHHHHHHCCCEEECCCEEEEECCCHHHHHCCCCCCHHHHHHHCCCHHH TLFFSATMPPEIQKLADRFLQNPERVEVARRSSTAITVTQRLVAAHGKDYEKRAVLRELI HEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLL HHHHHHHHHEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEECCCCCEEEE VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGASFTIVTKRDIKFADA EECCHHHCCCCCCCCHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHH IEKLIGQEVEWHNGDLSELPEPMESHDSRRDRGSDGRKDRKRERPVKTRSDHKAVTAVDN HHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECC NTEELETVPERVDTVKIERNAESKDRHNGRSDRPGRAQNAANDDNRDRRQRHRRDHDDGP CHHHHHHHHHHHHEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC TPVGFGDDIPAFMLIVGKA CCCCCCCCCCEEEEEECCC >Mature Secondary Structure TNFADLGLSQKVLSAVTDAGYTIPTPIQIGAIPPALQRRDILGIAQTGTGKTASFVLPM CCCHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCCEEEECCCCCCHHHHHHHH LTLLEKGRARARMPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKL HHHHHCCCHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHH ERGADVLICTPGRLLDHCERGKLLMSGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQ HCCCCEEEECCCHHHHHHHCCCEEECCCEEEEECCCHHHHHCCCCCCHHHHHHHCCCHHH TLFFSATMPPEIQKLADRFLQNPERVEVARRSSTAITVTQRLVAAHGKDYEKRAVLRELI HEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLL HHHHHHHHHEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEECCCCCEEEE VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGASFTIVTKRDIKFADA EECCHHHCCCCCCCCHHHEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHH IEKLIGQEVEWHNGDLSELPEPMESHDSRRDRGSDGRKDRKRERPVKTRSDHKAVTAVDN HHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECC NTEELETVPERVDTVKIERNAESKDRHNGRSDRPGRAQNAANDDNRDRRQRHRRDHDDGP CHHHHHHHHHHHHEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC TPVGFGDDIPAFMLIVGKA CCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8056751 [H]