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The map label for this gene is yebA [C]

Identifier: 150396690

GI number: 150396690

Start: 1563333

End: 1564661

Strand: Direct

Name: yebA [C]

Synonym: Smed_1477

Alternate gene names: 150396690

Gene position: 1563333-1564661 (Clockwise)

Preceding gene: 150396689

Following gene: 150396691

Centisome position: 41.34

GC content: 61.85

Gene sequence:

>1329_bases
GTGTCTGCTGGTTCGGAAAACGTCTTCGCGAAGCGTAGGCAAAGCCATGTCCTGATTCTGGCGAGCGGCGACAGGGTTCG
GCACATGACGGTCCGTCCATGGATGGCTGCGCTGATCACCTGCTTCGCCGGCGTGTTCGGCACTGGATATCTTGCAGCGA
CAACCTACCTCGTGCTTCGCGACGACCTGATTGGCGGAACGATCGCGCGGCAGGCGCGGATGCAGCACGAGTACGAGGAC
CGGATCACTGCACTGCGCGCACAGGTGGATCGTGTGACGAGCCGTCAATTGCTGGACCAGCAGATTGTCGAGGAAAAGGT
CGAAAAACTGCTGCAGAGGCAATTGGAACTGACCTCCAGGAGCGCAAAGTTCGGAGAGTTCTCGGAAGCCGGCGACGCTT
TTTCAGATACGGGGAAGGATGACGTTTCGCCGGGCACTGGGTCGCTGGGGGACGGCAATCAGGCAGGAACTGAGACCGGC
GTCAAGGCAATCGAGGCGATGATGGGCATTGCCGGCAACGATATTGGTCGCTCTCCTCACTCCGCCGCACTCGGCTATGC
CCCGACCTCCGCGGGAAGTTCCGGTGGCGAGAGCGCTTCCGACCGTGCCGATCGAGTTTTTTCCAGTGCTACGCTTTCAC
TCAAGGGATTGGAACTCGAACAGATGGCGCAGATGAAGCACATGACGGACACGGCGCTCAGGACGTCGGAGACGATCAGG
GCGATCGTCGAAGATGCGGGTTTCACAATGCCGGTAGTCGAGGAAGCGCTCAACGTGGACAGGTCGGCAGAGCCGGGTAT
CGGCGGTCCTTTCATCGAACCGCAGAACGGAGACGGGTTCGACCGATCGCTGCTCGACCTCGACACCGCTCTTGTGAAAC
TCGAGCGGACCCGCGAGGCCGCAAAAAGGCTTCCTCTCGCCAGTCCGGCACCGGCAGCCGACGTCACCAGCAGCTTCGGA
AACCGCGTGGATCCTTTCCTCGGCCGATTGGCGCTGCATGCCGGGATAGATTTCCGGACGGCGACCGGCACCCGCGTCCG
CGCGACCGCCGGCGGCATCGTCACGGCAGTAGGCTCGGCCGGCGGCTATGGAAACATGATTGAGATCGATCACGGCAATG
GCGTGTCGACCCGCTATGCGCATCTTTCGACCATTCTCGTCGATGTCGGCGAGGAAGTGAAGGCAGACGCGGTCATCGCC
AAGTCGGGAAGCACGGGACGATCGACCGGACCGCATCTTCATTACGAGGTCCGTCTGAACGGGCGGCCCGTCGATCCGGC
GCGGTTCCTGAGGGCCGGAACGGAGCTTTCCGGCTTCCTCGATCGATAG

Upstream 100 bases:

>100_bases
TAATCATCCGGAAGAAATGCGAGCTGGAGCGGAATGAAGGACAAGCGCCTGCGCTTCTCCTTCGGACGCGCGAAGTGAGC
GCATCGTCGGGGGTGATGTG

Downstream 100 bases:

>100_bases
GCCGCAAGGCCGGTCGCCATCTCTCGCGGACTTGATCAAAATGCAACAGATTCGGCTGATTTCAACTTCCGGTGTTTCAA
CGGGCTGGATTTCTTGACTT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSAGSENVFAKRRQSHVLILASGDRVRHMTVRPWMAALITCFAGVFGTGYLAATTYLVLRDDLIGGTIARQARMQHEYED
RITALRAQVDRVTSRQLLDQQIVEEKVEKLLQRQLELTSRSAKFGEFSEAGDAFSDTGKDDVSPGTGSLGDGNQAGTETG
VKAIEAMMGIAGNDIGRSPHSAALGYAPTSAGSSGGESASDRADRVFSSATLSLKGLELEQMAQMKHMTDTALRTSETIR
AIVEDAGFTMPVVEEALNVDRSAEPGIGGPFIEPQNGDGFDRSLLDLDTALVKLERTREAAKRLPLASPAPAADVTSSFG
NRVDPFLGRLALHAGIDFRTATGTRVRATAGGIVTAVGSAGGYGNMIEIDHGNGVSTRYAHLSTILVDVGEEVKADAVIA
KSGSTGRSTGPHLHYEVRLNGRPVDPARFLRAGTELSGFLDR

Sequences:

>Translated_442_residues
MSAGSENVFAKRRQSHVLILASGDRVRHMTVRPWMAALITCFAGVFGTGYLAATTYLVLRDDLIGGTIARQARMQHEYED
RITALRAQVDRVTSRQLLDQQIVEEKVEKLLQRQLELTSRSAKFGEFSEAGDAFSDTGKDDVSPGTGSLGDGNQAGTETG
VKAIEAMMGIAGNDIGRSPHSAALGYAPTSAGSSGGESASDRADRVFSSATLSLKGLELEQMAQMKHMTDTALRTSETIR
AIVEDAGFTMPVVEEALNVDRSAEPGIGGPFIEPQNGDGFDRSLLDLDTALVKLERTREAAKRLPLASPAPAADVTSSFG
NRVDPFLGRLALHAGIDFRTATGTRVRATAGGIVTAVGSAGGYGNMIEIDHGNGVSTRYAHLSTILVDVGEEVKADAVIA
KSGSTGRSTGPHLHYEVRLNGRPVDPARFLRAGTELSGFLDR
>Mature_441_residues
SAGSENVFAKRRQSHVLILASGDRVRHMTVRPWMAALITCFAGVFGTGYLAATTYLVLRDDLIGGTIARQARMQHEYEDR
ITALRAQVDRVTSRQLLDQQIVEEKVEKLLQRQLELTSRSAKFGEFSEAGDAFSDTGKDDVSPGTGSLGDGNQAGTETGV
KAIEAMMGIAGNDIGRSPHSAALGYAPTSAGSSGGESASDRADRVFSSATLSLKGLELEQMAQMKHMTDTALRTSETIRA
IVEDAGFTMPVVEEALNVDRSAEPGIGGPFIEPQNGDGFDRSLLDLDTALVKLERTREAAKRLPLASPAPAADVTSSFGN
RVDPFLGRLALHAGIDFRTATGTRVRATAGGIVTAVGSAGGYGNMIEIDHGNGVSTRYAHLSTILVDVGEEVKADAVIAK
SGSTGRSTGPHLHYEVRLNGRPVDPARFLRAGTELSGFLDR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=113, Percent_Identity=46.0176991150442, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082174, Length=99, Percent_Identity=40.4040404040404, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87082297, Length=96, Percent_Identity=35.4166666666667, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46932; Mature: 46801

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGSENVFAKRRQSHVLILASGDRVRHMTVRPWMAALITCFAGVFGTGYLAATTYLVLR
CCCCCCHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DDLIGGTIARQARMQHEYEDRITALRAQVDRVTSRQLLDQQIVEEKVEKLLQRQLELTSR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SAKFGEFSEAGDAFSDTGKDDVSPGTGSLGDGNQAGTETGVKAIEAMMGIAGNDIGRSPH
CCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
SAALGYAPTSAGSSGGESASDRADRVFSSATLSLKGLELEQMAQMKHMTDTALRTSETIR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AIVEDAGFTMPVVEEALNVDRSAEPGIGGPFIEPQNGDGFDRSLLDLDTALVKLERTREA
HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AKRLPLASPAPAADVTSSFGNRVDPFLGRLALHAGIDFRTATGTRVRATAGGIVTAVGSA
HHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEECCCC
GGYGNMIEIDHGNGVSTRYAHLSTILVDVGEEVKADAVIAKSGSTGRSTGPHLHYEVRLN
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHCCCEEEEECCCCCCCCCCEEEEEEEEC
GRPVDPARFLRAGTELSGFLDR
CCCCCHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
SAGSENVFAKRRQSHVLILASGDRVRHMTVRPWMAALITCFAGVFGTGYLAATTYLVLR
CCCCCHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DDLIGGTIARQARMQHEYEDRITALRAQVDRVTSRQLLDQQIVEEKVEKLLQRQLELTSR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SAKFGEFSEAGDAFSDTGKDDVSPGTGSLGDGNQAGTETGVKAIEAMMGIAGNDIGRSPH
CCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
SAALGYAPTSAGSSGGESASDRADRVFSSATLSLKGLELEQMAQMKHMTDTALRTSETIR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AIVEDAGFTMPVVEEALNVDRSAEPGIGGPFIEPQNGDGFDRSLLDLDTALVKLERTREA
HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AKRLPLASPAPAADVTSSFGNRVDPFLGRLALHAGIDFRTATGTRVRATAGGIVTAVGSA
HHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEECCCC
GGYGNMIEIDHGNGVSTRYAHLSTILVDVGEEVKADAVIAKSGSTGRSTGPHLHYEVRLN
CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHCCCEEEEECCCCCCCCCCEEEEEEEEC
GRPVDPARFLRAGTELSGFLDR
CCCCCHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]