| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396664
Identifier: 150396664
GI number: 150396664
Start: 1530377
End: 1531678
Strand: Direct
Name: 150396664
Synonym: Smed_1451
Alternate gene names: NA
Gene position: 1530377-1531678 (Clockwise)
Preceding gene: 150396663
Following gene: 150396669
Centisome position: 40.47
GC content: 63.75
Gene sequence:
>1302_bases TTGCAACATCTGGAAACAGGACGCGGTCTCCTGACAATCGGACGCGCCGCGGCATTATCCGTATCGCTGCTGGCACTCGC CGGATGCGTTTCCGCCGTTGCGGATGGCGAGACGATCGACCCCCTCAAATCGCAGCAGACGGCGGAAGCATCATTGGCAG GCTCCCAGGAAATATCGCCGGGTAAGCAAGAGGCGGTGCCTGACGACAGGACCGCGCAGGCGCCCGACGGCGCGACGGCG GATGCCGGACAGAGCGCAGCCGTGCAGCCCGGCCTTACCATGCAGGGAACTGCGCTACGCGCCACATCATCGAGTATTTA TGGAGAATCGCCGGCGGCGACATCCGCAGCCGTGCAGCCGGACCCAAGCAACCAGCCGACGCCAGCCGCCGCAGCACCGA GAATGAATGCCAGGACCAACAGCCTGTTCAGCAACGGGCAATCCGAGGCCCAAACGGCGAATCAGCCGCCGCAGGGGGCC TCGGCAGGGCAAACTCCTGCGGCAAACGAAACGATTGCGGCTACAGGTCCGACTGCCGCAGTCGATATGCCCGTGTCGGT ACCGTTGCCTTTGAGCGCGCAGGCAGCACTGTCAGGAGCGACCGCGTCGGCCCTGCAACCGGTCGAAGTCGCTTCCGCAG CGGCGGTGAGCACGCCTTCCGCGGGCCCCGGCGAAGGCGAGAAGGAGACAAAAGGGGCGAAGAAGACCTGGACCCTGGCG AGCCTGTTCGCGCCCAAACGCAAGGAAATGCCGCGCGAAACACACGCTGCGCAAGCAAGCCGGAAGAAGACGATAACCGT GAGTAATGCGGGTCAGCCTCAGATCGCATCTCTCGCCTATGCTTCCCTGCCGGGCGTCAATATGAATCCGCTCTTCAGCG TGGAGCACGATGCGCATGCTGCCGACGAGGACGACGCGCCCTTGGAAGTGGCCAACCTCTCCGGCCTCGCCCGACTCACA CCGAACGGCCTCATACTGCAAACCGAGAAGGTGGAAACAGGCTGCTTCAAACCGGAGCTTCTCAACATTTTGAGAACGGT GGAAGCGCATTACGGCCGCAAGGTCATGGTCACCTCGGGCCTGCGCGCCATCAAGGTCAACCGCAAGCGCCAGTCCCGAC ACACACGATGCGAGGCGGCCGACATTCAGGTGGCGGGCGTCAGCAAATGGGAGCTTGCAGATTTCCTGCGCAAAGTTCCG GGCCGCGGCGGCGTCGGCACCTATTGTCACACCGAATCCGTACACATCGACATCGGCCCGCAACGGGACTGGAACTGGCG GTGCCGCCGCCGCAAGGGTTGA
Upstream 100 bases:
>100_bases GTGAAAATGTTATTGCCGGGTCGGACGGTGTTCCTGAGTCGGATCGTGCGGCGTGCGCGGTGCAGAGCCACCCGCATGCA CGAAGAGCGGGGAAAAGGCG
Downstream 100 bases:
>100_bases CCACCGAGAGCCACGTCAAGCTAACCGTGGAGGCGAATGAGATGTCGCGACCGGCCGGTCATTTTTCTGGGAAAAAATGA AACCTGCCACTTGCGGGAAT
Product: peptidase M15A
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISPGKQEAVPDDRTAQAPDGATA DAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQPDPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGA SAGQTPAANETIAATGPTAAVDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHAADEDDAPLEVANLSGLARLT PNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSGLRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVP GRGGVGTYCHTESVHIDIGPQRDWNWRCRRRKG
Sequences:
>Translated_433_residues MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISPGKQEAVPDDRTAQAPDGATA DAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQPDPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGA SAGQTPAANETIAATGPTAAVDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHAADEDDAPLEVANLSGLARLT PNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSGLRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVP GRGGVGTYCHTESVHIDIGPQRDWNWRCRRRKG >Mature_433_residues MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISPGKQEAVPDDRTAQAPDGATA DAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQPDPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGA SAGQTPAANETIAATGPTAAVDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHAADEDDAPLEVANLSGLARLT PNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSGLRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVP GRGGVGTYCHTESVHIDIGPQRDWNWRCRRRKG
Specific function: Unknown
COG id: COG3108
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44859; Mature: 44859
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISP CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC GKQEAVPDDRTAQAPDGATADAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQP CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCC DPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGASAGQTPAANETIAATGPTAA CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEE VDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA EECCEECCCCCCHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHH SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHA HHHCCHHHCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC ADEDDAPLEVANLSGLARLTPNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSG CCCCCCCEEEECCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC LRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVPGRGGVGTYCHTESVHIDIGP CEEEEECCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCC QRDWNWRCRRRKG CCCCCCCCCCCCC >Mature Secondary Structure MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISP CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC GKQEAVPDDRTAQAPDGATADAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQP CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCC DPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGASAGQTPAANETIAATGPTAA CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEE VDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA EECCEECCCCCCHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHH SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHA HHHCCHHHCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC ADEDDAPLEVANLSGLARLTPNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSG CCCCCCCEEEECCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC LRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVPGRGGVGTYCHTESVHIDIGP CEEEEECCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCC QRDWNWRCRRRKG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA