Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150396664

Identifier: 150396664

GI number: 150396664

Start: 1530377

End: 1531678

Strand: Direct

Name: 150396664

Synonym: Smed_1451

Alternate gene names: NA

Gene position: 1530377-1531678 (Clockwise)

Preceding gene: 150396663

Following gene: 150396669

Centisome position: 40.47

GC content: 63.75

Gene sequence:

>1302_bases
TTGCAACATCTGGAAACAGGACGCGGTCTCCTGACAATCGGACGCGCCGCGGCATTATCCGTATCGCTGCTGGCACTCGC
CGGATGCGTTTCCGCCGTTGCGGATGGCGAGACGATCGACCCCCTCAAATCGCAGCAGACGGCGGAAGCATCATTGGCAG
GCTCCCAGGAAATATCGCCGGGTAAGCAAGAGGCGGTGCCTGACGACAGGACCGCGCAGGCGCCCGACGGCGCGACGGCG
GATGCCGGACAGAGCGCAGCCGTGCAGCCCGGCCTTACCATGCAGGGAACTGCGCTACGCGCCACATCATCGAGTATTTA
TGGAGAATCGCCGGCGGCGACATCCGCAGCCGTGCAGCCGGACCCAAGCAACCAGCCGACGCCAGCCGCCGCAGCACCGA
GAATGAATGCCAGGACCAACAGCCTGTTCAGCAACGGGCAATCCGAGGCCCAAACGGCGAATCAGCCGCCGCAGGGGGCC
TCGGCAGGGCAAACTCCTGCGGCAAACGAAACGATTGCGGCTACAGGTCCGACTGCCGCAGTCGATATGCCCGTGTCGGT
ACCGTTGCCTTTGAGCGCGCAGGCAGCACTGTCAGGAGCGACCGCGTCGGCCCTGCAACCGGTCGAAGTCGCTTCCGCAG
CGGCGGTGAGCACGCCTTCCGCGGGCCCCGGCGAAGGCGAGAAGGAGACAAAAGGGGCGAAGAAGACCTGGACCCTGGCG
AGCCTGTTCGCGCCCAAACGCAAGGAAATGCCGCGCGAAACACACGCTGCGCAAGCAAGCCGGAAGAAGACGATAACCGT
GAGTAATGCGGGTCAGCCTCAGATCGCATCTCTCGCCTATGCTTCCCTGCCGGGCGTCAATATGAATCCGCTCTTCAGCG
TGGAGCACGATGCGCATGCTGCCGACGAGGACGACGCGCCCTTGGAAGTGGCCAACCTCTCCGGCCTCGCCCGACTCACA
CCGAACGGCCTCATACTGCAAACCGAGAAGGTGGAAACAGGCTGCTTCAAACCGGAGCTTCTCAACATTTTGAGAACGGT
GGAAGCGCATTACGGCCGCAAGGTCATGGTCACCTCGGGCCTGCGCGCCATCAAGGTCAACCGCAAGCGCCAGTCCCGAC
ACACACGATGCGAGGCGGCCGACATTCAGGTGGCGGGCGTCAGCAAATGGGAGCTTGCAGATTTCCTGCGCAAAGTTCCG
GGCCGCGGCGGCGTCGGCACCTATTGTCACACCGAATCCGTACACATCGACATCGGCCCGCAACGGGACTGGAACTGGCG
GTGCCGCCGCCGCAAGGGTTGA

Upstream 100 bases:

>100_bases
GTGAAAATGTTATTGCCGGGTCGGACGGTGTTCCTGAGTCGGATCGTGCGGCGTGCGCGGTGCAGAGCCACCCGCATGCA
CGAAGAGCGGGGAAAAGGCG

Downstream 100 bases:

>100_bases
CCACCGAGAGCCACGTCAAGCTAACCGTGGAGGCGAATGAGATGTCGCGACCGGCCGGTCATTTTTCTGGGAAAAAATGA
AACCTGCCACTTGCGGGAAT

Product: peptidase M15A

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISPGKQEAVPDDRTAQAPDGATA
DAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQPDPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGA
SAGQTPAANETIAATGPTAAVDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA
SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHAADEDDAPLEVANLSGLARLT
PNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSGLRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVP
GRGGVGTYCHTESVHIDIGPQRDWNWRCRRRKG

Sequences:

>Translated_433_residues
MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISPGKQEAVPDDRTAQAPDGATA
DAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQPDPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGA
SAGQTPAANETIAATGPTAAVDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA
SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHAADEDDAPLEVANLSGLARLT
PNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSGLRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVP
GRGGVGTYCHTESVHIDIGPQRDWNWRCRRRKG
>Mature_433_residues
MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISPGKQEAVPDDRTAQAPDGATA
DAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQPDPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGA
SAGQTPAANETIAATGPTAAVDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA
SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHAADEDDAPLEVANLSGLARLT
PNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSGLRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVP
GRGGVGTYCHTESVHIDIGPQRDWNWRCRRRKG

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44859; Mature: 44859

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISP
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC
GKQEAVPDDRTAQAPDGATADAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQP
CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCC
DPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGASAGQTPAANETIAATGPTAA
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEE
VDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA
EECCEECCCCCCHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHH
SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHA
HHHCCHHHCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC
ADEDDAPLEVANLSGLARLTPNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSG
CCCCCCCEEEECCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC
LRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVPGRGGVGTYCHTESVHIDIGP
CEEEEECCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCC
QRDWNWRCRRRKG
CCCCCCCCCCCCC
>Mature Secondary Structure
MQHLETGRGLLTIGRAAALSVSLLALAGCVSAVADGETIDPLKSQQTAEASLAGSQEISP
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC
GKQEAVPDDRTAQAPDGATADAGQSAAVQPGLTMQGTALRATSSSIYGESPAATSAAVQP
CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCCCCCCC
DPSNQPTPAAAAPRMNARTNSLFSNGQSEAQTANQPPQGASAGQTPAANETIAATGPTAA
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEE
VDMPVSVPLPLSAQAALSGATASALQPVEVASAAAVSTPSAGPGEGEKETKGAKKTWTLA
EECCEECCCCCCHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHH
SLFAPKRKEMPRETHAAQASRKKTITVSNAGQPQIASLAYASLPGVNMNPLFSVEHDAHA
HHHCCHHHCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCC
ADEDDAPLEVANLSGLARLTPNGLILQTEKVETGCFKPELLNILRTVEAHYGRKVMVTSG
CCCCCCCEEEECCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEECC
LRAIKVNRKRQSRHTRCEAADIQVAGVSKWELADFLRKVPGRGGVGTYCHTESVHIDIGP
CEEEEECCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEECCEEEEECCC
QRDWNWRCRRRKG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA