| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396642
Identifier: 150396642
GI number: 150396642
Start: 1510331
End: 1511188
Strand: Direct
Name: 150396642
Synonym: Smed_1428
Alternate gene names: NA
Gene position: 1510331-1511188 (Clockwise)
Preceding gene: 150396641
Following gene: 150396644
Centisome position: 39.94
GC content: 55.59
Gene sequence:
>858_bases ATGGATCATCTTCAAACATCTGGTTCTCACCACAGAGCGAAAAGCAAAAGCGAAATCCAGGCGACGGTCCGCCGCCTCGC GCCCTTCCATCACGCCATCGACTTGCCCTTTGGGCTCAGTACGTTTGTTCCTGAACTTTCCCGGCAGACACGAGAACGTA CCAGACTGCAGACGTTCCTCGATCACGCCTGGGGAAGTATTCTCACCGCCTGCGGAGGTTCGTTGAAAGGCAAAAGAGTT CTGGACATCGCATGCAATTGCGGCGGCTTCTCGGTCCACGCGGCAAACTCAGGGGCAGACTATGTGTTCGGGATCGATAT TGACGCCCATTACGTAGAGCAGGCGAGCTTCGTCGGAGATGCTCTCGGACTATCGAATGTTGAGTTCCAGCAGCTTGATC TTCTGGATCTCGACCCTTCCACTCACGGCAAATTCGACCTCGTCCTCTGCCTCGGCATTCTTTACCACCTGGAAAACCCG GTTCTGAGCATGAAGCGCATTTCAGCCGTGACCGGAGACGTTCTGGTCGTTGACACGACACTTATGAAAGTCCCGATCAT CAATCCCGTTCTGGACCGGTGGCCATTGTGGCACATGCGCAGAGTCTCGGGGACCACTTCCGATGCAACCAACATCAGCA CATCTCGCTGGCGACCCGATGAATTCTGCCAATTCTCCCCCAACAGCCCTGCTGTCCGGAACCTCTTGGAGTATTGCGGC TTTACCGAGATTGCGCGGCTCAAAGCGAAGGCAAAGAATTTGGAAAAGCGCTACTACAGCGGCCGAAGGGCGACGTTCAT AGCGCAAAGACGCAGATCCTCACAGGGGGACGCTTCCCCCACTCTTACGGCGGCATGA
Upstream 100 bases:
>100_bases AAAATGAGTCCTGACCCCTCCTGCCCGTCGAAGGTGCAGGCGTGGCTCTCTGATTCGTTTGCACAATTTCCTTTATGAAT TTTCATCGTGGAGAATAACG
Downstream 100 bases:
>100_bases ATATGCCTCGCCACCATCCCGAGACGAACCGGGCGGGCTCGGATAAAGCGCGTCCGTTTCTCGCCGGTCGATCAGGCATA TAAGATCGGCACTAAAAATT
Product: type 12 methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Protein; Methyltransferase; 3-Demethylubiquinone-9 3-O-Methyltransferase; SAM-Dependent Methyltransferase Protein; Methyltransferase Domain Family Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MDHLQTSGSHHRAKSKSEIQATVRRLAPFHHAIDLPFGLSTFVPELSRQTRERTRLQTFLDHAWGSILTACGGSLKGKRV LDIACNCGGFSVHAANSGADYVFGIDIDAHYVEQASFVGDALGLSNVEFQQLDLLDLDPSTHGKFDLVLCLGILYHLENP VLSMKRISAVTGDVLVVDTTLMKVPIINPVLDRWPLWHMRRVSGTTSDATNISTSRWRPDEFCQFSPNSPAVRNLLEYCG FTEIARLKAKAKNLEKRYYSGRRATFIAQRRRSSQGDASPTLTAA
Sequences:
>Translated_285_residues MDHLQTSGSHHRAKSKSEIQATVRRLAPFHHAIDLPFGLSTFVPELSRQTRERTRLQTFLDHAWGSILTACGGSLKGKRV LDIACNCGGFSVHAANSGADYVFGIDIDAHYVEQASFVGDALGLSNVEFQQLDLLDLDPSTHGKFDLVLCLGILYHLENP VLSMKRISAVTGDVLVVDTTLMKVPIINPVLDRWPLWHMRRVSGTTSDATNISTSRWRPDEFCQFSPNSPAVRNLLEYCG FTEIARLKAKAKNLEKRYYSGRRATFIAQRRRSSQGDASPTLTAA >Mature_285_residues MDHLQTSGSHHRAKSKSEIQATVRRLAPFHHAIDLPFGLSTFVPELSRQTRERTRLQTFLDHAWGSILTACGGSLKGKRV LDIACNCGGFSVHAANSGADYVFGIDIDAHYVEQASFVGDALGLSNVEFQQLDLLDLDPSTHGKFDLVLCLGILYHLENP VLSMKRISAVTGDVLVVDTTLMKVPIINPVLDRWPLWHMRRVSGTTSDATNISTSRWRPDEFCQFSPNSPAVRNLLEYCG FTEIARLKAKAKNLEKRYYSGRRATFIAQRRRSSQGDASPTLTAA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31641; Mature: 31641
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHLQTSGSHHRAKSKSEIQATVRRLAPFHHAIDLPFGLSTFVPELSRQTRERTRLQTFL CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DHAWGSILTACGGSLKGKRVLDIACNCGGFSVHAANSGADYVFGIDIDAHYVEQASFVGD HHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHH ALGLSNVEFQQLDLLDLDPSTHGKFDLVLCLGILYHLENPVLSMKRISAVTGDVLVVDTT HHCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHH LMKVPIINPVLDRWPLWHMRRVSGTTSDATNISTSRWRPDEFCQFSPNSPAVRNLLEYCG HHHCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCC FTEIARLKAKAKNLEKRYYSGRRATFIAQRRRSSQGDASPTLTAA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDHLQTSGSHHRAKSKSEIQATVRRLAPFHHAIDLPFGLSTFVPELSRQTRERTRLQTFL CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DHAWGSILTACGGSLKGKRVLDIACNCGGFSVHAANSGADYVFGIDIDAHYVEQASFVGD HHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHH ALGLSNVEFQQLDLLDLDPSTHGKFDLVLCLGILYHLENPVLSMKRISAVTGDVLVVDTT HHCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHH LMKVPIINPVLDRWPLWHMRRVSGTTSDATNISTSRWRPDEFCQFSPNSPAVRNLLEYCG HHHCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCC FTEIARLKAKAKNLEKRYYSGRRATFIAQRRRSSQGDASPTLTAA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA