| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396638
Identifier: 150396638
GI number: 150396638
Start: 1506918
End: 1507964
Strand: Direct
Name: 150396638
Synonym: Smed_1424
Alternate gene names: NA
Gene position: 1506918-1507964 (Clockwise)
Preceding gene: 150396635
Following gene: 150396639
Centisome position: 39.85
GC content: 55.97
Gene sequence:
>1047_bases ATGGCGCGCGCGCCGAGGCAGGTTGTGTCATGGCTGGGATATATGACTACGCGCATTATCAGGTCGCTTCGGAAGAGGTT CCGGCGTGCATTTAAGCCGCGGACGGTTTCTATATTCGGGGTCAAACTTATCGCGGCAGACGAACGTGTTCCCCCGTATC TGCAAGACCTGATGTATCGCGAGGTCTACGAAGACACAGAGCGAAACATCCTTCTAAAGATACTGAAGCCAAGCGCAAGG GTTCTGGAAATAGGGACCGGCGTCGGCTTTATTGCCGCTCTCGCTGCCGCAATTTGCGGTCAGGATAACGTCTCGACATA TGAGGCAAACAGCAGCCTTGCCAGCCTCATACGCGACAACTTCCGCCTGAATCAACTAGAGCCACATCTCGTCCTAAAGG CCGTTACTTCAGACGGCCGGACGGTTTCGTTCCATCAGGCCGAAAATGTCATCTCCTCAAGCATTTTCGACCGGAAGATT GTTGGACACACGATTGAAGTGGAGAGCGTGAAGTTTTCCCATATCCTCGATCGTCATCGGCCTGACGTTCTGATCATGGA TGTCGAGGGTGCCGAGGACGAGCTCCTCCGCATCCCCGGCTTTGGCAGCGTCCAACATATTCCCGTAGAACTCCAGCCGC ACATCATCGGCCGGGATAAGGTGGATGAGCTGAAGCGCATAGTTGAACTCCGCGGCTTCCGGCAGCGGTTCAGCGACCAT CTCTCAGCTAGGCGCATCAGAACTATCAATGCCTTGCGTGCTGCCCCTCCTCTTGCCATGGATGCCGGATTGAAGATACT GGCGCCAGACGCAGTTTTCGCCACGATGGCGCAAGCGTGCCAAGGGGTCCGCGATCAGCTGAGACGTCATGAGAATCTTC ATCCTCGCTGGAATTCTGATCGGAGCCTTGCTCGTGTTCTTGCTCGTATCGGGCATTGCAGACATCCCATGCCAGGCAGG CAGCTGGGATCCCGGCAAGTACACCTGCACTCATACGGGAGTCACGTCGTGACAACGAGAGCGCTCGCCCGTTTCACCCG TGCATGA
Upstream 100 bases:
>100_bases TTTCGAAGGCCGCTCCGCCAGTTGGCAACGAGTCAGATCCGCCGCGTCGGAGGCACGATGTTCTATTATTGCTGGTTGTA TTGGTACAACTTTTCTATTA
Downstream 100 bases:
>100_bases TATGAAGCTGCATGACCGACACCGAACAGCAGTATGAGTTTTCAGAATTCTCCGGCCAATTCGTCGACGACGGAGTCGTG GTGGTGATCGGCATCTACCG
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Methyltransferase FkbM; GSCFA Family; Methyltransferase FkbM Family Protein
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYREVYEDTERNILLKILKPSAR VLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDNFRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKI VGHTIEVESVKFSHILDRHRPDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSDRSLARVLARIGHCRHPMPGR QLGSRQVHLHSYGSHVVTTRALARFTRA
Sequences:
>Translated_348_residues MARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYREVYEDTERNILLKILKPSAR VLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDNFRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKI VGHTIEVESVKFSHILDRHRPDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSDRSLARVLARIGHCRHPMPGR QLGSRQVHLHSYGSHVVTTRALARFTRA >Mature_347_residues ARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYREVYEDTERNILLKILKPSARV LEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDNFRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKIV GHTIEVESVKFSHILDRHRPDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDHL SARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSDRSLARVLARIGHCRHPMPGRQ LGSRQVHLHSYGSHVVTTRALARFTRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39393; Mature: 39262
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHH EVYEDTERNILLKILKPSARVLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDN HHHHHHHHHEEHEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHC FRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKIVGHTIEVESVKFSHILDRHR CCCCCCCHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCC PDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH CCEEEEECCCCCCCEEECCCCCCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSD HHHHHHHHHHHHHCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RSLARVLARIGHCRHPMPGRQLGSRQVHLHSYGSHVVTTRALARFTRA HHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure ARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHH EVYEDTERNILLKILKPSARVLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDN HHHHHHHHHEEHEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHC FRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKIVGHTIEVESVKFSHILDRHR CCCCCCCHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCC PDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH CCEEEEECCCCCCCEEECCCCCCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSD HHHHHHHHHHHHHCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RSLARVLARIGHCRHPMPGRQLGSRQVHLHSYGSHVVTTRALARFTRA HHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA