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The map label for this gene is lrp [C]

Identifier: 150396585

GI number: 150396585

Start: 1449480

End: 1449941

Strand: Direct

Name: lrp [C]

Synonym: Smed_1369

Alternate gene names: 150396585

Gene position: 1449480-1449941 (Clockwise)

Preceding gene: 150396583

Following gene: 150396588

Centisome position: 38.33

GC content: 56.49

Gene sequence:

>462_bases
ATGAGTGGCTTGGATGCTATCGATCGTTCGATTCTGCGCATTCTGCAGCAGGATGGCCGCATCTCGAATGCCGACCTTGC
CTCGAGGGTCGGCCTTTCTCCGTCCGCCTGTTCGCGGCGGGTCGACATACTCGAAAAGTCCGGGACCATTGCCGGCTACC
ATGCGCGCATCGCCCACAAGGCGCTCGATTACAAGATCATGGTCATCGTGCACATCTCGCTATCGGGGCAGTTTGCCAAG
ACGCTAACCGAATTCGAAGCCGCCGTGAAACTGTGCCCGAACGTGCTCGTATGTTATCTGATGTCCGGAGAATATGATTA
TATTCTGCGTGTGGCGGCGAAGGACCTGGAGGACTACGAACGCATTCACCGCGACTGGCTCTCGGCGCTGCCGCATGTGG
TGAAGATCAACTCGAGTTTTTCGCTCCGCGAAATCATCGATAGGCCGAATGTCGGCATCTGA

Upstream 100 bases:

>100_bases
AACAGATGGCGTCTGGAATGTCCTTGCAAAGAAGCGCTTATCGATGCATTGGTTTCGGTGTTTCTTGCGTGAAGCTCCGT
CTAATCGAAGGAAGATGCGA

Downstream 100 bases:

>100_bases
GTCGGCTGAGTTGCCATGCTCTGCGACAAAGGCGCCTGCAAGAATCAGCCGCTTTGCGCCGCCGGTCCATTCCGCCATAG
TCAAAGCGCGTTTTCGAGGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: ORF-1 [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSGLDAIDRSILRILQQDGRISNADLASRVGLSPSACSRRVDILEKSGTIAGYHARIAHKALDYKIMVIVHISLSGQFAK
TLTEFEAAVKLCPNVLVCYLMSGEYDYILRVAAKDLEDYERIHRDWLSALPHVVKINSSFSLREIIDRPNVGI

Sequences:

>Translated_153_residues
MSGLDAIDRSILRILQQDGRISNADLASRVGLSPSACSRRVDILEKSGTIAGYHARIAHKALDYKIMVIVHISLSGQFAK
TLTEFEAAVKLCPNVLVCYLMSGEYDYILRVAAKDLEDYERIHRDWLSALPHVVKINSSFSLREIIDRPNVGI
>Mature_152_residues
SGLDAIDRSILRILQQDGRISNADLASRVGLSPSACSRRVDILEKSGTIAGYHARIAHKALDYKIMVIVHISLSGQFAKT
LTEFEAAVKLCPNVLVCYLMSGEYDYILRVAAKDLEDYERIHRDWLSALPHVVKINSSFSLREIIDRPNVGI

Specific function: Not known, symbiotically active [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=142, Percent_Identity=38.7323943661972, Blast_Score=106, Evalue=6e-25,
Organism=Escherichia coli, GI87081742, Length=142, Percent_Identity=30.9859154929577, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17070; Mature: 16939

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLDAIDRSILRILQQDGRISNADLASRVGLSPSACSRRVDILEKSGTIAGYHARIAHK
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALDYKIMVIVHISLSGQFAKTLTEFEAAVKLCPNVLVCYLMSGEYDYILRVAAKDLEDYE
HHCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RIHRDWLSALPHVVKINSSFSLREIIDRPNVGI
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
SGLDAIDRSILRILQQDGRISNADLASRVGLSPSACSRRVDILEKSGTIAGYHARIAHK
CCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALDYKIMVIVHISLSGQFAKTLTEFEAAVKLCPNVLVCYLMSGEYDYILRVAAKDLEDYE
HHCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RIHRDWLSALPHVVKINSSFSLREIIDRPNVGI
HHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8190622; 9163424 [H]