| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is trkG [H]
Identifier: 150396588
GI number: 150396588
Start: 1453934
End: 1455388
Strand: Direct
Name: trkG [H]
Synonym: Smed_1374
Alternate gene names: 150396588
Gene position: 1453934-1455388 (Clockwise)
Preceding gene: 150396585
Following gene: 150396589
Centisome position: 38.44
GC content: 58.21
Gene sequence:
>1455_bases TTGAACGCGAATCTGATCCGGCACGCTGTCCATCTCGCTGCGATTCTGGGGCTTTATCTCTCCGGCGCGATGCTTATTCC GGCCTTCGTCGATCTTTATTACGGCCATCCGGACTGGCAGGTTTTTGCCGTGACGGCTTTCATGACCGGCGCGATTTCGT CAACGACTTTCATGGCGACACGCTCAGGTCCACCGCCATTCTCGAAGAAGTTCGGCTTCCTGGTGGTCAATGTCCTGTGG CTCGTTTTCTCGATCGTCGGCGCCATTCCACTTTGGCTATCCTCGGTCAATCTCGATTTTGCCCAGGCCTTCTTCGAGTC CGTATCGGCGGTGACGACGACCGGGTCGACCGTCATCGTCGGCCTCGATGACGCCCCGCCGGGTCTTCTTCTTTGGCGCT CGCTTCTCAGTTGGCTGGGCGGGATCGGTATCGTCGTTCTCGGCCTCTTCATCATCCCCTACTTGCGCGTCGGCGGCATG TCCTTTTTCAAGATGGAATCATCCGACACGGGCGACAAACCCTTTGCCCGGCTGGCAAGCTTCGGCCGCGCCTTTCTCGT CATCTATGTATCGATCACCCTGCTTTGCGCGATCAGTTATGGCGTGCTCGGAATGAGCCGGTTCGACGCGGTCAACCATG CCATGACGACTGTCGCCACGGGCGGCTTCTCGACGCACGACGCTTCGTTCGGCTATTTCGCGAGCATCCCGCTGTTCTGG GCCAGCACCTTCTTCATGGCGCTTTGCAGCCTCCCCTTCTCCATCCTGATCGTGCTCTTCGTTCGCGGGCGCCTGGATGC GCTTCGCGACCCTCAAATCATCGTTTTTCTGGGCTACCTCACGGCGTTCTCGGTTGCGGTCGCGACCTATCACAGGCTTG CAAACGGCGTCGAATTCCATCTGGCGCTGACGCATGCCTTCTTCAATGTGACATCGCTTCTTTCGACCACCGGTTATGCC AGCGAGGACTATAGCCTGTGGGGGCCCTTCGTGGTCATGGTCGCCTTCATCTGCACCTTTATCGGCGGGTGCTCCGGCTC CACTGCCGGCGGCATGAAGGCATATCGATTCGTCGTGCTCTTCAACGCCATTCGGTCGGCCCTGAACAAACTCGTATACC CGAACGCGATCTATGCGGTCCGCTACGGTAAAAATACGGTCGACGCGGACGTGCAACGGGCGATTCTTCTGTTTTTCATT ACCTATATTCTGCTCTGGGTTTTCGGCAGCCTGGTCATGGGTGCTCTCGGCTATGACTTCATCACGGCCGTATCGTCCGT AATCACATGCCTCTCCAACGTAGGTCCCGGCCTTGGGAGTCTCGTCGGCCCCGCGGGGAATTTCGCGACCTTCGAAGACG CCGAGCTTTATCTGCTGTCTCTGCTGATGCTGCTCGGCCGTCTTGAAGTCTTGACTGTGCTCGTCGTGCTCACACCGGTC TTCTGGCGGCAGTAA
Upstream 100 bases:
>100_bases GAAACCATCGATTTGACACGAATCGGTTGGCAACGGCACTATCGCCGCCGCTCCGGGCGATCGCCGGCCATCGACAACCG CTTGCAGGATATCAAGAGCT
Downstream 100 bases:
>100_bases CGGCCGCTTCGCTGCGCTTGCTTGACTTGGTGTGCCAAATGCCGAAAGCTTACAAAAATCGGGCATTCTGGGAAGCACGA TGCCGAGACACCTGCTCCTG
Product: cation transporter
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MNANLIRHAVHLAAILGLYLSGAMLIPAFVDLYYGHPDWQVFAVTAFMTGAISSTTFMATRSGPPPFSKKFGFLVVNVLW LVFSIVGAIPLWLSSVNLDFAQAFFESVSAVTTTGSTVIVGLDDAPPGLLLWRSLLSWLGGIGIVVLGLFIIPYLRVGGM SFFKMESSDTGDKPFARLASFGRAFLVIYVSITLLCAISYGVLGMSRFDAVNHAMTTVATGGFSTHDASFGYFASIPLFW ASTFFMALCSLPFSILIVLFVRGRLDALRDPQIIVFLGYLTAFSVAVATYHRLANGVEFHLALTHAFFNVTSLLSTTGYA SEDYSLWGPFVVMVAFICTFIGGCSGSTAGGMKAYRFVVLFNAIRSALNKLVYPNAIYAVRYGKNTVDADVQRAILLFFI TYILLWVFGSLVMGALGYDFITAVSSVITCLSNVGPGLGSLVGPAGNFATFEDAELYLLSLLMLLGRLEVLTVLVVLTPV FWRQ
Sequences:
>Translated_484_residues MNANLIRHAVHLAAILGLYLSGAMLIPAFVDLYYGHPDWQVFAVTAFMTGAISSTTFMATRSGPPPFSKKFGFLVVNVLW LVFSIVGAIPLWLSSVNLDFAQAFFESVSAVTTTGSTVIVGLDDAPPGLLLWRSLLSWLGGIGIVVLGLFIIPYLRVGGM SFFKMESSDTGDKPFARLASFGRAFLVIYVSITLLCAISYGVLGMSRFDAVNHAMTTVATGGFSTHDASFGYFASIPLFW ASTFFMALCSLPFSILIVLFVRGRLDALRDPQIIVFLGYLTAFSVAVATYHRLANGVEFHLALTHAFFNVTSLLSTTGYA SEDYSLWGPFVVMVAFICTFIGGCSGSTAGGMKAYRFVVLFNAIRSALNKLVYPNAIYAVRYGKNTVDADVQRAILLFFI TYILLWVFGSLVMGALGYDFITAVSSVITCLSNVGPGLGSLVGPAGNFATFEDAELYLLSLLMLLGRLEVLTVLVVLTPV FWRQ >Mature_484_residues MNANLIRHAVHLAAILGLYLSGAMLIPAFVDLYYGHPDWQVFAVTAFMTGAISSTTFMATRSGPPPFSKKFGFLVVNVLW LVFSIVGAIPLWLSSVNLDFAQAFFESVSAVTTTGSTVIVGLDDAPPGLLLWRSLLSWLGGIGIVVLGLFIIPYLRVGGM SFFKMESSDTGDKPFARLASFGRAFLVIYVSITLLCAISYGVLGMSRFDAVNHAMTTVATGGFSTHDASFGYFASIPLFW ASTFFMALCSLPFSILIVLFVRGRLDALRDPQIIVFLGYLTAFSVAVATYHRLANGVEFHLALTHAFFNVTSLLSTTGYA SEDYSLWGPFVVMVAFICTFIGGCSGSTAGGMKAYRFVVLFNAIRSALNKLVYPNAIYAVRYGKNTVDADVQRAILLFFI TYILLWVFGSLVMGALGYDFITAVSSVITCLSNVGPGLGSLVGPAGNFATFEDAELYLLSLLMLLGRLEVLTVLVVLTPV FWRQ
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA. TrkE increases the affinity of the system [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=490, Percent_Identity=33.469387755102, Blast_Score=275, Evalue=3e-75, Organism=Escherichia coli, GI48994987, Length=487, Percent_Identity=36.1396303901437, Blast_Score=254, Evalue=1e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 52425; Mature: 52425
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANLIRHAVHLAAILGLYLSGAMLIPAFVDLYYGHPDWQVFAVTAFMTGAISSTTFMAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEE RSGPPPFSKKFGFLVVNVLWLVFSIVGAIPLWLSSVNLDFAQAFFESVSAVTTTGSTVIV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCEEEE GLDDAPPGLLLWRSLLSWLGGIGIVVLGLFIIPYLRVGGMSFFKMESSDTGDKPFARLAS ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH FGRAFLVIYVSITLLCAISYGVLGMSRFDAVNHAMTTVATGGFSTHDASFGYFASIPLFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH ASTFFMALCSLPFSILIVLFVRGRLDALRDPQIIVFLGYLTAFSVAVATYHRLANGVEFH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHH LALTHAFFNVTSLLSTTGYASEDYSLWGPFVVMVAFICTFIGGCSGSTAGGMKAYRFVVL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH FNAIRSALNKLVYPNAIYAVRYGKNTVDADVQRAILLFFITYILLWVFGSLVMGALGYDF HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAVSSVITCLSNVGPGLGSLVGPAGNFATFEDAELYLLSLLMLLGRLEVLTVLVVLTPV HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWRQ HHCC >Mature Secondary Structure MNANLIRHAVHLAAILGLYLSGAMLIPAFVDLYYGHPDWQVFAVTAFMTGAISSTTFMAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEE RSGPPPFSKKFGFLVVNVLWLVFSIVGAIPLWLSSVNLDFAQAFFESVSAVTTTGSTVIV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCEEEE GLDDAPPGLLLWRSLLSWLGGIGIVVLGLFIIPYLRVGGMSFFKMESSDTGDKPFARLAS ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH FGRAFLVIYVSITLLCAISYGVLGMSRFDAVNHAMTTVATGGFSTHDASFGYFASIPLFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH ASTFFMALCSLPFSILIVLFVRGRLDALRDPQIIVFLGYLTAFSVAVATYHRLANGVEFH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHH LALTHAFFNVTSLLSTTGYASEDYSLWGPFVVMVAFICTFIGGCSGSTAGGMKAYRFVVL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH FNAIRSALNKLVYPNAIYAVRYGKNTVDADVQRAILLFFITYILLWVFGSLVMGALGYDF HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAVSSVITCLSNVGPGLGSLVGPAGNFATFEDAELYLLSLLMLLGRLEVLTVLVVLTPV HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWRQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2022616; 9097039; 9278503 [H]