| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396517
Identifier: 150396517
GI number: 150396517
Start: 1393900
End: 1395969
Strand: Direct
Name: 150396517
Synonym: Smed_1299
Alternate gene names: NA
Gene position: 1393900-1395969 (Clockwise)
Preceding gene: 150396516
Following gene: 150396518
Centisome position: 36.86
GC content: 58.5
Gene sequence:
>2070_bases TTGACCAGTAGAGTCAGATGGCTCAATCACCGCGCCTCCACGAATCGCGAGAGACGCTCCACCGTGACAAAACAGACTAT CCGGGAAACCACGCCAAAACGCTCAGCGGCACAGGCGCATGCCGAAGCTCTAACCGAATCCGCAGACGCCCGACAGAAGC GCGGTCAGAAACCGCGGCCGATTGTGGAGTTTCCAGACCCTCTTTTCGATGAGTGGGAAGACCCTCCAACGTTCGCCGAA GCACTGCAACTGCACATGCGGCGACACGGCGACACGTGCTGGCACTTGCATCGCTCCATCGTCCGTCCCGGCGAAGCATT CAACCGAAAGACGATAGTGGTTTGGTTCAACGGCGAAAAGCCACCGAGAAGCGTTCAAAGCCTGGAGATACTAGGGCGTA TAGAGCGCCGGTATCGACTTCCCGCAGGCTATTTCAAGAACAAGTTACCCCCGACCGCGCGTGCAGCAAGAGGACATATT ATGGGTGACGACATCGGGGATGCCGAACGCCGGCGGCTGGCCTGGCATCTGCCCGATGATTTCAACTCACTTCCATTTGA GAAGCGAGAAGAAATCATTGAATGGGTGCGACGGGTCATCATCAGCGGCACGACCGAATACCGTCGGTTCCAAGCTGCGG CGAGCAAACAGCGCTATGCAATCAGGTTCCCTGCTCTAACGGGACGATCCTCATCGCCGGTTTGGGAAGCCGAGGACGAG GATCCCGACATCGACGGTCCTGACCTCCTTTCCGGTAGTTTGGATGCGCCGGCGAACCTGGCGGCGGAGATGGAAGATCT TGTTCGGTTTAAAACATCGACGCTCACCGACCTCGGCTTCCAGCGCAACGGCATATGGGGAGACGAAACGGCGGCGCAAA AGATCGAGCACCTTGGGCTTATGTTTGGCGCACTCTCTGCTGCGCCTACCGAAGGCGTGCAAGGCTACGGTCTCCCCTTC ACGCGACTGACATTCGGCCTTCTCGCATTCCTTGGGGTTTGGGATTGGTATCTGCGCTGGCGCGAACGCCGGCGCGGGTT CTACACGATCTGGGAGGTCAACATGCTGGCGGTCGCGCTCGCTCTAACGCGGCGCGAAACGGGCTGGCTTCGGCAGCACC CGGAGTTTCTCGCACGCGTGCGCCCCATCCCCGGCCTAATCTCCGAAAGCGAGATCGCTGCGGCATCGGGCGACTGGGAT GGTTTCTGCGATACCTTCTACCGTCATCTGACAAGCCGCTCCAAGGAGATTAAGCGCGTCGCGCGCGTGCATCGCGATCC CTTTGAACCGATCATGTGTGTGCTTGAGACGGATAGCCCACTTTCCGAATACCGGAAAATCACCGACGAGATCGTCGCTC GGATGCCCGATGAGAAACGCTACCCGCGAGCGGCCGCTGAGGCTGTGCGATCATTTCTGCTGCTGCGACTTGGTTTGCAC CTCGGTCTTCGCCAGAAGAACCTGCGTCAGTTGCTTGTGTGCCCTCGCGGCCAGTTCCCGACGTCAGAGCGCCGGCTCGA GGATTTAAGGCGCGGCGAGCTGCGATGGAGCGATCGCGACCGAGGGTGGGAGGTGTTGATTCCGGCAAATGCGTTCAAGA ACGCGAGTTCGTCGTTCTTCGGTCAGAAACCGTTTCGACTCGTGCTTCCCGACCTTTTGGATCTCTACAAGTACATCGAC GCCTATGTGGGGCGACACAGGGCGGCGCTATTAGGCGACATCGCAGATCCCGGCACGTTCTTTGTTAAGACGACAAAAGT CAACACTAAGGACGCCGCTTATGACCAAATCTCCATCTACGATGCTTGGCGGCTGACGATTCAGCGATACGGCATCTACA ACCCATACACTGACCGCGGAGCTATCAAGGGCCTGCTGCCCCATGGGCCGCACAACGTGCGGGACGTGCTGGCGACGCAC ATCCTGAAGAAAACTGGTTCATACGAACAGGCCAGTTACGCAATCCAAGACACGCCAGAAATGATCCGCAACCACTACGG TCGGTTTCTGCCGGAGGACAAGGCCGCGTTGGCGGCTCGGATTTTGAATGAAGTTTGGAGGGCGGCTTAA
Upstream 100 bases:
>100_bases AAGCTGCCGAACCCGCGAGTCATTGATTCGCGACCCGATCTGACACGCCAACTAATTGATATTGTTTTACAAATTTGTCA AAAATATCGATTTTCGCCTA
Downstream 100 bases:
>100_bases TGACTAGCGATCCTCTCTCTCAACTTCCGATGTTCGCCACCGACCAGCAACTGGCCATCGCAATCGTTGGCAAGGATCGC GCCTCAATGTGGGTGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MTSRVRWLNHRASTNRERRSTVTKQTIRETTPKRSAAQAHAEALTESADARQKRGQKPRPIVEFPDPLFDEWEDPPTFAE ALQLHMRRHGDTCWHLHRSIVRPGEAFNRKTIVVWFNGEKPPRSVQSLEILGRIERRYRLPAGYFKNKLPPTARAARGHI MGDDIGDAERRRLAWHLPDDFNSLPFEKREEIIEWVRRVIISGTTEYRRFQAAASKQRYAIRFPALTGRSSSPVWEAEDE DPDIDGPDLLSGSLDAPANLAAEMEDLVRFKTSTLTDLGFQRNGIWGDETAAQKIEHLGLMFGALSAAPTEGVQGYGLPF TRLTFGLLAFLGVWDWYLRWRERRRGFYTIWEVNMLAVALALTRRETGWLRQHPEFLARVRPIPGLISESEIAAASGDWD GFCDTFYRHLTSRSKEIKRVARVHRDPFEPIMCVLETDSPLSEYRKITDEIVARMPDEKRYPRAAAEAVRSFLLLRLGLH LGLRQKNLRQLLVCPRGQFPTSERRLEDLRRGELRWSDRDRGWEVLIPANAFKNASSSFFGQKPFRLVLPDLLDLYKYID AYVGRHRAALLGDIADPGTFFVKTTKVNTKDAAYDQISIYDAWRLTIQRYGIYNPYTDRGAIKGLLPHGPHNVRDVLATH ILKKTGSYEQASYAIQDTPEMIRNHYGRFLPEDKAALAARILNEVWRAA
Sequences:
>Translated_689_residues MTSRVRWLNHRASTNRERRSTVTKQTIRETTPKRSAAQAHAEALTESADARQKRGQKPRPIVEFPDPLFDEWEDPPTFAE ALQLHMRRHGDTCWHLHRSIVRPGEAFNRKTIVVWFNGEKPPRSVQSLEILGRIERRYRLPAGYFKNKLPPTARAARGHI MGDDIGDAERRRLAWHLPDDFNSLPFEKREEIIEWVRRVIISGTTEYRRFQAAASKQRYAIRFPALTGRSSSPVWEAEDE DPDIDGPDLLSGSLDAPANLAAEMEDLVRFKTSTLTDLGFQRNGIWGDETAAQKIEHLGLMFGALSAAPTEGVQGYGLPF TRLTFGLLAFLGVWDWYLRWRERRRGFYTIWEVNMLAVALALTRRETGWLRQHPEFLARVRPIPGLISESEIAAASGDWD GFCDTFYRHLTSRSKEIKRVARVHRDPFEPIMCVLETDSPLSEYRKITDEIVARMPDEKRYPRAAAEAVRSFLLLRLGLH LGLRQKNLRQLLVCPRGQFPTSERRLEDLRRGELRWSDRDRGWEVLIPANAFKNASSSFFGQKPFRLVLPDLLDLYKYID AYVGRHRAALLGDIADPGTFFVKTTKVNTKDAAYDQISIYDAWRLTIQRYGIYNPYTDRGAIKGLLPHGPHNVRDVLATH ILKKTGSYEQASYAIQDTPEMIRNHYGRFLPEDKAALAARILNEVWRAA >Mature_688_residues TSRVRWLNHRASTNRERRSTVTKQTIRETTPKRSAAQAHAEALTESADARQKRGQKPRPIVEFPDPLFDEWEDPPTFAEA LQLHMRRHGDTCWHLHRSIVRPGEAFNRKTIVVWFNGEKPPRSVQSLEILGRIERRYRLPAGYFKNKLPPTARAARGHIM GDDIGDAERRRLAWHLPDDFNSLPFEKREEIIEWVRRVIISGTTEYRRFQAAASKQRYAIRFPALTGRSSSPVWEAEDED PDIDGPDLLSGSLDAPANLAAEMEDLVRFKTSTLTDLGFQRNGIWGDETAAQKIEHLGLMFGALSAAPTEGVQGYGLPFT RLTFGLLAFLGVWDWYLRWRERRRGFYTIWEVNMLAVALALTRRETGWLRQHPEFLARVRPIPGLISESEIAAASGDWDG FCDTFYRHLTSRSKEIKRVARVHRDPFEPIMCVLETDSPLSEYRKITDEIVARMPDEKRYPRAAAEAVRSFLLLRLGLHL GLRQKNLRQLLVCPRGQFPTSERRLEDLRRGELRWSDRDRGWEVLIPANAFKNASSSFFGQKPFRLVLPDLLDLYKYIDA YVGRHRAALLGDIADPGTFFVKTTKVNTKDAAYDQISIYDAWRLTIQRYGIYNPYTDRGAIKGLLPHGPHNVRDVLATHI LKKTGSYEQASYAIQDTPEMIRNHYGRFLPEDKAALAARILNEVWRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79251; Mature: 79120
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRVRWLNHRASTNRERRSTVTKQTIRETTPKRSAAQAHAEALTESADARQKRGQKPRP CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC IVEFPDPLFDEWEDPPTFAEALQLHMRRHGDTCWHLHRSIVRPGEAFNRKTIVVWFNGEK CCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCEEEEEECCCC PPRSVQSLEILGRIERRYRLPAGYFKNKLPPTARAARGHIMGDDIGDAERRRLAWHLPDD CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHEEEECCCC FNSLPFEKREEIIEWVRRVIISGTTEYRRFQAAASKQRYAIRFPALTGRSSSPVWEAEDE CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC DPDIDGPDLLSGSLDAPANLAAEMEDLVRFKTSTLTDLGFQRNGIWGDETAAQKIEHLGL CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH MFGALSAAPTEGVQGYGLPFTRLTFGLLAFLGVWDWYLRWRERRRGFYTIWEVNMLAVAL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH ALTRRETGWLRQHPEFLARVRPIPGLISESEIAAASGDWDGFCDTFYRHLTSRSKEIKRV HHHHHHCCHHHCCHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ARVHRDPFEPIMCVLETDSPLSEYRKITDEIVARMPDEKRYPRAAAEAVRSFLLLRLGLH HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LGLRQKNLRQLLVCPRGQFPTSERRLEDLRRGELRWSDRDRGWEVLIPANAFKNASSSFF HCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCCHHC GQKPFRLVLPDLLDLYKYIDAYVGRHRAALLGDIADPGTFFVKTTKVNTKDAAYDQISIY CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEHH DAWRLTIQRYGIYNPYTDRGAIKGLLPHGPHNVRDVLATHILKKTGSYEQASYAIQDTPE HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHH MIRNHYGRFLPEDKAALAARILNEVWRAA HHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSRVRWLNHRASTNRERRSTVTKQTIRETTPKRSAAQAHAEALTESADARQKRGQKPRP CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC IVEFPDPLFDEWEDPPTFAEALQLHMRRHGDTCWHLHRSIVRPGEAFNRKTIVVWFNGEK CCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCEEEEEECCCC PPRSVQSLEILGRIERRYRLPAGYFKNKLPPTARAARGHIMGDDIGDAERRRLAWHLPDD CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHEEEECCCC FNSLPFEKREEIIEWVRRVIISGTTEYRRFQAAASKQRYAIRFPALTGRSSSPVWEAEDE CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC DPDIDGPDLLSGSLDAPANLAAEMEDLVRFKTSTLTDLGFQRNGIWGDETAAQKIEHLGL CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH MFGALSAAPTEGVQGYGLPFTRLTFGLLAFLGVWDWYLRWRERRRGFYTIWEVNMLAVAL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH ALTRRETGWLRQHPEFLARVRPIPGLISESEIAAASGDWDGFCDTFYRHLTSRSKEIKRV HHHHHHCCHHHCCHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ARVHRDPFEPIMCVLETDSPLSEYRKITDEIVARMPDEKRYPRAAAEAVRSFLLLRLGLH HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LGLRQKNLRQLLVCPRGQFPTSERRLEDLRRGELRWSDRDRGWEVLIPANAFKNASSSFF HCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHCCCCCHHC GQKPFRLVLPDLLDLYKYIDAYVGRHRAALLGDIADPGTFFVKTTKVNTKDAAYDQISIY CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEHH DAWRLTIQRYGIYNPYTDRGAIKGLLPHGPHNVRDVLATHILKKTGSYEQASYAIQDTPE HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHH MIRNHYGRFLPEDKAALAARILNEVWRAA HHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA