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The map label for this gene is 150396516

Identifier: 150396516

GI number: 150396516

Start: 1393439

End: 1393711

Strand: Direct

Name: 150396516

Synonym: Smed_1298

Alternate gene names: NA

Gene position: 1393439-1393711 (Clockwise)

Preceding gene: 150396514

Following gene: 150396517

Centisome position: 36.84

GC content: 56.78

Gene sequence:

>273_bases
ATGATACCAATGGATCAAATTTCTTTGACGGGACACCAGATTGCGGCAGCGCGCACCTTGGCAAATATGACCCAAAAGGA
CTTGGCCGACCGCGCGAATATTTCCATCCCCACCCTCAAGAGGATGGAGGGCGCCAAGAGCGATGTAGTCGCAATGTCCA
ATAACGCGCGAGCGGTACGTGCAGCACTGGAGGGCGCTGGGATCATCTTCCTCTCTGACGGCGAAACGATTTCAGGCGGC
CCAGGCGTCCGTCTGCGCGATCGTCAATCGTGA

Upstream 100 bases:

>100_bases
TAATCTCACAATGGTCATCTTGGTCTCCTCATTGCCTCGAAAGTGTCTACGTGATACTTTTGGATCAATTCGACCTGTAT
GTCAACACCTTTAGATCAGA

Downstream 100 bases:

>100_bases
GGAACTCACGGATGCCTAAAAAAAGAAACTTTGAACATCCCGAACTCGCTGGCGAGTTCTTCGAGCGACGAAGACCCTGT
TCTCATCGAAGCTGCCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MIPMDQISLTGHQIAAARTLANMTQKDLADRANISIPTLKRMEGAKSDVVAMSNNARAVRAALEGAGIIFLSDGETISGG
PGVRLRDRQS

Sequences:

>Translated_90_residues
MIPMDQISLTGHQIAAARTLANMTQKDLADRANISIPTLKRMEGAKSDVVAMSNNARAVRAALEGAGIIFLSDGETISGG
PGVRLRDRQS
>Mature_90_residues
MIPMDQISLTGHQIAAARTLANMTQKDLADRANISIPTLKRMEGAKSDVVAMSNNARAVRAALEGAGIIFLSDGETISGG
PGVRLRDRQS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9520; Mature: 9520

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPMDQISLTGHQIAAARTLANMTQKDLADRANISIPTLKRMEGAKSDVVAMSNNARAVR
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEECCCCCEEH
AALEGAGIIFLSDGETISGGPGVRLRDRQS
HECCCCCEEEECCCCEECCCCCCEECCCCC
>Mature Secondary Structure
MIPMDQISLTGHQIAAARTLANMTQKDLADRANISIPTLKRMEGAKSDVVAMSNNARAVR
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEECCCCCEEH
AALEGAGIIFLSDGETISGGPGVRLRDRQS
HECCCCCEEEECCCCEECCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA