Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150396496

Identifier: 150396496

GI number: 150396496

Start: 1371613

End: 1373427

Strand: Direct

Name: 150396496

Synonym: Smed_1278

Alternate gene names: NA

Gene position: 1371613-1373427 (Clockwise)

Preceding gene: 150396494

Following gene: 150396497

Centisome position: 36.27

GC content: 63.42

Gene sequence:

>1815_bases
ATGACCGAAATTGCCGCAAATCAGGTACGTGCTCCTGAGCGAATTCTTACAGCCGGCCCGCTTTCCGCAGAATTGGTGGC
GGGCAACTTGCGAACGATCCGATGGCACGGTCACGAAGCGATCCGCGCCATCGCATATCTCGTGCGTGACGAGAACTGGG
GCAATTATCCACTGCGGATCTCCGGACTGGATGTCGATGAGCAAGGCGACAGTTTCGTCGTATCCTACCAAGCGGAAGCG
GTCTCCACGGCGGGTGCGCGGCTGGCGATCAGCGTCCGGATAGCCGGCAGTTCCGGAGGCAAGCTCGTCTTTGAAGCCGA
TGCCGTAGCGGATGCCGACTTCGGAACGAATCGCTGTGGTTTTACGATTCTGCACCCGATCGTCGGCGTTGCCGGACAGC
CAGCGACGGTGGAACATACGGACGGCACGGTCCGCGAGTCGCGTTTCCCCGATTTGATCGAACCGTCACAGCCTTTTCTG
GATATGCGTGCGATCACGCATGCCATCGCTCCCGGCGCCAGCGTCGAGTGCCGCATGGAAGGCGACACATTCGAGATGGA
GGACCAGCGGAACTGGACCGATGCGTCCTACAAGACCTATGTCCGGCCGCTTGCGCTCCCTTGGCCCTATGTAGTGCCGG
CGGGTGCCGCCAACAGGCAGGCCATTACCCTGACCTTTTCCGGGCGGCCGGCGGCCGTGATCTGTGCCGCGGAACGCAGC
GCGCCGGTTCGCCTGTCGCTTGGACCGGAGGCTGGCCGGGTCCCGGCTTTCGGTCTCGGCATCCGTCCCGAGGACCTTCC
GTCGACATTCGCGTCCCTGGACGCCTTACGCGAAATCGCCCCCCAGCATCTTGTGCTGAATTTCAACCCGCTTGCGGGTC
ATGATTCGACGGCGCTGGAGGCCTATGCGAAGCTATTGTCCGTCTATCGCGCCGCGGCCACACTGGAATTGGTGCTGCCA
TGCAGGCAGGCGCCGGATGCTGAGATGCGCGAGGCGGCTGCCGCGGTTGAAAGGGCCGGCCTGGTCCTTTCTGCGATTGC
CGTCAGTCCGGCGCCGGATCTCAAATCGACGCCGCCCGGCAGTGCCTGGCCGGAATGCCCGCCACTGGACGAGGTTTACG
CGGCGGCGCGAAAGGCCTTCCCAGGTCTGCCGCTCGGTGGTGGCATGTTCAGCTATTTCACCGAATTGAACCGCAAGCGT
CCCCCGGTCCATTTGCTGGATTTCATCACCCACACGACCTCGCCCCTCGTGCACGCCGCGGACGATCGCAGTGTCATGGA
AACACTCGAGGCTCTGCCTTTCGTCACCCGCTCCGTTCGCGATTTTGCGGAACGGCTGCCCTATCGTATCGGCCCGTCCT
CGATCGGCATGCGCAGCAACCCCTACGGGGCTGCGCTGAATCCCAATTCGAACGGGGAACGGATGACCATGACGGCCCAC
GATCCCCGCCAGACGACGGCTTTCGCCGCTGCCTGGATGGTCGGCTATGCGGCGGCCGTCGCTAGTGCGGGTCTCGACGT
CCTAACGCTCGGTTCGCTGGCGGGACCGTTCGGCGTCGTCGGTGAGGGAATTCGCTATCCGGCGTTCAGGGCGGCATGCC
GCCTGTCCCGGTTTGCCGGAACGCGGGCTCGTCTGGTCGAAAGTTCCGACCCGGTTCGGGTCCTGGCGCTTTGCGGCGGA
AACACCGTTCTGGTTGCGAATATTTCGCCGGAACGCCTCGAAGTCGTGCTTGACGGGGCAAGTGCCGACGAAGCGCTCCC
GGTTGTCATCGAAGCATATGGGATTTACGAGTTCGACGTGAAGGCGCGCGGATGA

Upstream 100 bases:

>100_bases
GAAGGTACGATCATTGACTCATCATACCAGTTCGGTTACTCGAATGAGCAAGACGGCTGGAGGAGGTCCAAATGACATCG
AGTGCGATGGATGGGGTGGC

Downstream 100 bases:

>100_bases
GCAAGCCTCTGCTGACCTATTATGGCGACGACCTCACTGGTTCCACGGACGTGATGGAGGCGCTCGCCACGCGCGGCTGC
CCGACCGTGCTTTTCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 604; Mature: 603

Protein sequence:

>604_residues
MTEIAANQVRAPERILTAGPLSAELVAGNLRTIRWHGHEAIRAIAYLVRDENWGNYPLRISGLDVDEQGDSFVVSYQAEA
VSTAGARLAISVRIAGSSGGKLVFEADAVADADFGTNRCGFTILHPIVGVAGQPATVEHTDGTVRESRFPDLIEPSQPFL
DMRAITHAIAPGASVECRMEGDTFEMEDQRNWTDASYKTYVRPLALPWPYVVPAGAANRQAITLTFSGRPAAVICAAERS
APVRLSLGPEAGRVPAFGLGIRPEDLPSTFASLDALREIAPQHLVLNFNPLAGHDSTALEAYAKLLSVYRAAATLELVLP
CRQAPDAEMREAAAAVERAGLVLSAIAVSPAPDLKSTPPGSAWPECPPLDEVYAAARKAFPGLPLGGGMFSYFTELNRKR
PPVHLLDFITHTTSPLVHAADDRSVMETLEALPFVTRSVRDFAERLPYRIGPSSIGMRSNPYGAALNPNSNGERMTMTAH
DPRQTTAFAAAWMVGYAAAVASAGLDVLTLGSLAGPFGVVGEGIRYPAFRAACRLSRFAGTRARLVESSDPVRVLALCGG
NTVLVANISPERLEVVLDGASADEALPVVIEAYGIYEFDVKARG

Sequences:

>Translated_604_residues
MTEIAANQVRAPERILTAGPLSAELVAGNLRTIRWHGHEAIRAIAYLVRDENWGNYPLRISGLDVDEQGDSFVVSYQAEA
VSTAGARLAISVRIAGSSGGKLVFEADAVADADFGTNRCGFTILHPIVGVAGQPATVEHTDGTVRESRFPDLIEPSQPFL
DMRAITHAIAPGASVECRMEGDTFEMEDQRNWTDASYKTYVRPLALPWPYVVPAGAANRQAITLTFSGRPAAVICAAERS
APVRLSLGPEAGRVPAFGLGIRPEDLPSTFASLDALREIAPQHLVLNFNPLAGHDSTALEAYAKLLSVYRAAATLELVLP
CRQAPDAEMREAAAAVERAGLVLSAIAVSPAPDLKSTPPGSAWPECPPLDEVYAAARKAFPGLPLGGGMFSYFTELNRKR
PPVHLLDFITHTTSPLVHAADDRSVMETLEALPFVTRSVRDFAERLPYRIGPSSIGMRSNPYGAALNPNSNGERMTMTAH
DPRQTTAFAAAWMVGYAAAVASAGLDVLTLGSLAGPFGVVGEGIRYPAFRAACRLSRFAGTRARLVESSDPVRVLALCGG
NTVLVANISPERLEVVLDGASADEALPVVIEAYGIYEFDVKARG
>Mature_603_residues
TEIAANQVRAPERILTAGPLSAELVAGNLRTIRWHGHEAIRAIAYLVRDENWGNYPLRISGLDVDEQGDSFVVSYQAEAV
STAGARLAISVRIAGSSGGKLVFEADAVADADFGTNRCGFTILHPIVGVAGQPATVEHTDGTVRESRFPDLIEPSQPFLD
MRAITHAIAPGASVECRMEGDTFEMEDQRNWTDASYKTYVRPLALPWPYVVPAGAANRQAITLTFSGRPAAVICAAERSA
PVRLSLGPEAGRVPAFGLGIRPEDLPSTFASLDALREIAPQHLVLNFNPLAGHDSTALEAYAKLLSVYRAAATLELVLPC
RQAPDAEMREAAAAVERAGLVLSAIAVSPAPDLKSTPPGSAWPECPPLDEVYAAARKAFPGLPLGGGMFSYFTELNRKRP
PVHLLDFITHTTSPLVHAADDRSVMETLEALPFVTRSVRDFAERLPYRIGPSSIGMRSNPYGAALNPNSNGERMTMTAHD
PRQTTAFAAAWMVGYAAAVASAGLDVLTLGSLAGPFGVVGEGIRYPAFRAACRLSRFAGTRARLVESSDPVRVLALCGGN
TVLVANISPERLEVVLDGASADEALPVVIEAYGIYEFDVKARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64404; Mature: 64273

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIAANQVRAPERILTAGPLSAELVAGNLRTIRWHGHEAIRAIAYLVRDENWGNYPLRI
CCCCCCHHCCCCHHHEECCCCCCEEEECCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEE
SGLDVDEQGDSFVVSYQAEAVSTAGARLAISVRIAGSSGGKLVFEADAVADADFGTNRCG
ECCCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCC
FTILHPIVGVAGQPATVEHTDGTVRESRFPDLIEPSQPFLDMRAITHAIAPGASVECRME
HHHHHHHHCCCCCCCEEECCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEC
GDTFEMEDQRNWTDASYKTYVRPLALPWPYVVPAGAANRQAITLTFSGRPAAVICAAERS
CCEEEECCCCCCCCCCHHHHHCEECCCCCCEECCCCCCCEEEEEEECCCCEEEEEEECCC
APVRLSLGPEAGRVPAFGLGIRPEDLPSTFASLDALREIAPQHLVLNFNPLAGHDSTALE
CCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
AYAKLLSVYRAAATLELVLPCRQAPDAEMREAAAAVERAGLVLSAIAVSPAPDLKSTPPG
HHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC
SAWPECPPLDEVYAAARKAFPGLPLGGGMFSYFTELNRKRPPVHLLDFITHTTSPLVHAA
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEC
DDRSVMETLEALPFVTRSVRDFAERLPYRIGPSSIGMRSNPYGAALNPNSNGERMTMTAH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEECCCCCCCEEEEEEC
DPRQTTAFAAAWMVGYAAAVASAGLDVLTLGSLAGPFGVVGEGIRYPAFRAACRLSRFAG
CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHCC
TRARLVESSDPVRVLALCGGNTVLVANISPERLEVVLDGASADEALPVVIEAYGIYEFDV
CHHEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECEEEEEE
KARG
EECC
>Mature Secondary Structure 
TEIAANQVRAPERILTAGPLSAELVAGNLRTIRWHGHEAIRAIAYLVRDENWGNYPLRI
CCCCCHHCCCCHHHEECCCCCCEEEECCEEEEEECCHHHHHHHHHHHCCCCCCCCCEEE
SGLDVDEQGDSFVVSYQAEAVSTAGARLAISVRIAGSSGGKLVFEADAVADADFGTNRCG
ECCCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCC
FTILHPIVGVAGQPATVEHTDGTVRESRFPDLIEPSQPFLDMRAITHAIAPGASVECRME
HHHHHHHHCCCCCCCEEECCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEC
GDTFEMEDQRNWTDASYKTYVRPLALPWPYVVPAGAANRQAITLTFSGRPAAVICAAERS
CCEEEECCCCCCCCCCHHHHHCEECCCCCCEECCCCCCCEEEEEEECCCCEEEEEEECCC
APVRLSLGPEAGRVPAFGLGIRPEDLPSTFASLDALREIAPQHLVLNFNPLAGHDSTALE
CCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
AYAKLLSVYRAAATLELVLPCRQAPDAEMREAAAAVERAGLVLSAIAVSPAPDLKSTPPG
HHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC
SAWPECPPLDEVYAAARKAFPGLPLGGGMFSYFTELNRKRPPVHLLDFITHTTSPLVHAA
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEC
DDRSVMETLEALPFVTRSVRDFAERLPYRIGPSSIGMRSNPYGAALNPNSNGERMTMTAH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEECCCCCCCEEEEEEC
DPRQTTAFAAAWMVGYAAAVASAGLDVLTLGSLAGPFGVVGEGIRYPAFRAACRLSRFAG
CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHCC
TRARLVESSDPVRVLALCGGNTVLVANISPERLEVVLDGASADEALPVVIEAYGIYEFDV
CHHEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECEEEEEE
KARG
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA