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The map label for this gene is 150396440

Identifier: 150396440

GI number: 150396440

Start: 1304748

End: 1305509

Strand: Direct

Name: 150396440

Synonym: Smed_1222

Alternate gene names: NA

Gene position: 1304748-1305509 (Clockwise)

Preceding gene: 150396439

Following gene: 150396441

Centisome position: 34.5

GC content: 63.65

Gene sequence:

>762_bases
ATGCCGCTCCGACCCACCCCCTTGCCTCAGGATGCTGCGCAATTAACCCGGATCATTCTCTCGCTCGACGAAGAGAATGC
CGATCTCAAAGCGCGCGTCGCCTTCCTCGAGGGCCAGCTCTTTGGGCCGAAGTCGGAGAAAATGACGGCGATCGACCCGA
CGCAGGCGACGCTCGACCTTGGCGACCTCAGCGACATTCCCGCAGCTGCCAATGACGATGTTGCGCCCGTCACCGAGGGG
ACAACACCGGCTCGACGATCGCCAGCCCGCAATATCGGCCGTTTGCCCAAGCACCTTCCCCGGTATGAAGAGGTCATCGA
GCCGGAGAGCAAGAGCTGCCCCTGCTGTTCGTTCGACCTGCATTGCATCGGCACGGATGTCAGCGAGGCGCTCGACATCG
TGCCGGCTGTTGTCCGGGTCAAACGGACGATCCGGCCGCGCTACGCATGCCGGGCCTGCGAAAGCGTTGTTGTGCAAGCG
CCCGCGCCGGCGCGTGTGATGGACGGCGGCATGGTGACTACGGCCTTTGCCGCCCATGTCGCCGTTTCGAAGTTTGCCTG
GCATCTGCCGCTGCATCGCCAGGCGCAGATGCTTGCCTCCTGCGGCGTGGTGATCGATCGCGGCACGCTCGGCGCCTGGG
TGACGCGGATCGCTTGGTGGCTCGAGCTTCTCTACGATGCGCTTACCGCCTTCATCCGCTCCCAGCCAAGGGTGTTCTGT
GACGAGAGTGTGCTGCAGAGGCACGGAAGGAGTTCAGTATGA

Upstream 100 bases:

>100_bases
CTGGACGCGGGTCAAACGAAACGCGGTAAAGCGACCGACGAAAGCAGGCTGATCCTATTGGTTTTGCTTGCAGATTCAGG
CTTGTGTGGTAGGGTCGTCC

Downstream 100 bases:

>100_bases
ACTGACACTGTGTCGTAAAGCTGTGTGAATGATGGAGGATGGCCCTCCGGGATCGGCTTTCAGGAGCGGGTCTCAAACCA
GTCCGAGCTGCTGCGGTAAA

Product: transposase IS66

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPLRPTPLPQDAAQLTRIILSLDEENADLKARVAFLEGQLFGPKSEKMTAIDPTQATLDLGDLSDIPAAANDDVAPVTEG
TTPARRSPARNIGRLPKHLPRYEEVIEPESKSCPCCSFDLHCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESVVVQA
PAPARVMDGGMVTTAFAAHVAVSKFAWHLPLHRQAQMLASCGVVIDRGTLGAWVTRIAWWLELLYDALTAFIRSQPRVFC
DESVLQRHGRSSV

Sequences:

>Translated_253_residues
MPLRPTPLPQDAAQLTRIILSLDEENADLKARVAFLEGQLFGPKSEKMTAIDPTQATLDLGDLSDIPAAANDDVAPVTEG
TTPARRSPARNIGRLPKHLPRYEEVIEPESKSCPCCSFDLHCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESVVVQA
PAPARVMDGGMVTTAFAAHVAVSKFAWHLPLHRQAQMLASCGVVIDRGTLGAWVTRIAWWLELLYDALTAFIRSQPRVFC
DESVLQRHGRSSV
>Mature_252_residues
PLRPTPLPQDAAQLTRIILSLDEENADLKARVAFLEGQLFGPKSEKMTAIDPTQATLDLGDLSDIPAAANDDVAPVTEGT
TPARRSPARNIGRLPKHLPRYEEVIEPESKSCPCCSFDLHCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESVVVQAP
APARVMDGGMVTTAFAAHVAVSKFAWHLPLHRQAQMLASCGVVIDRGTLGAWVTRIAWWLELLYDALTAFIRSQPRVFCD
ESVLQRHGRSSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 27687; Mature: 27556

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRPTPLPQDAAQLTRIILSLDEENADLKARVAFLEGQLFGPKSEKMTAIDPTQATLDL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCHHEEEC
GDLSDIPAAANDDVAPVTEGTTPARRSPARNIGRLPKHLPRYEEVIEPESKSCPCCSFDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC
HCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESVVVQAPAPARVMDGGMVTTAFAAHV
EEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCHHHCCCHHHHHHHHHH
AVSKFAWHLPLHRQAQMLASCGVVIDRGTLGAWVTRIAWWLELLYDALTAFIRSQPRVFC
HHHHHHHHCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DESVLQRHGRSSV
CHHHHHHCCCCCC
>Mature Secondary Structure 
PLRPTPLPQDAAQLTRIILSLDEENADLKARVAFLEGQLFGPKSEKMTAIDPTQATLDL
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCHHEEEC
GDLSDIPAAANDDVAPVTEGTTPARRSPARNIGRLPKHLPRYEEVIEPESKSCPCCSFDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC
HCIGTDVSEALDIVPAVVRVKRTIRPRYACRACESVVVQAPAPARVMDGGMVTTAFAAHV
EEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCCHHHCCCHHHHHHHHHH
AVSKFAWHLPLHRQAQMLASCGVVIDRGTLGAWVTRIAWWLELLYDALTAFIRSQPRVFC
HHHHHHHHCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DESVLQRHGRSSV
CHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]