Click here to switch to the map view.

The map label for this gene is 150396439

Identifier: 150396439

GI number: 150396439

Start: 1304343

End: 1304699

Strand: Direct

Name: 150396439

Synonym: Smed_1221

Alternate gene names: NA

Gene position: 1304343-1304699 (Clockwise)

Preceding gene: 150396438

Following gene: 150396440

Centisome position: 34.49

GC content: 59.66

Gene sequence:

>357_bases
GTGATCGGAGTTTCGCCGAATGCCGTGAAGATCATGGTGGCGACGCAGCCTGTCGACTTCCGGCGCGGCATGAATGGCCT
GGTGGCTTTGGTGGCATCAGCGCTTGCGGCCGATCCCTATTGTGGCGACGTGTTCGTGTTCCGGGCCAAGCGTCTCGATC
GACTTCGCTGCATTTACTGGGACGGATCAGGCATGATCCTGGTGACGAAATGGCTGGAGGCGGGCAAGTTCGTTTGGCCA
CCGATCCGCGATGGCGCGATGCAGATGAGTAGCCAGGAGTTCTCGCTTTTGTTGGCCGGTATCGACTGGACGCGGGTCAA
ACGAAACGCGGTAAAGCGACCGACGAAAGCAGGCTGA

Upstream 100 bases:

>100_bases
GTCGAATTGAGATCGAGATTGCCGGGGCGCGCATGACCGTGATCGGCTCGGTGGCGCCCGAGTTGGCGCAGGCGATGGTG
GCGGCGTTGCGAGGACGCCG

Downstream 100 bases:

>100_bases
TCCTATTGGTTTTGCTTGCAGATTCAGGCTTGTGTGGTAGGGTCGTCCATGCCGCTCCGACCCACCCCCTTGCCTCAGGA
TGCTGCGCAATTAACCCGGA

Product: IS66 Orf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MIGVSPNAVKIMVATQPVDFRRGMNGLVALVASALAADPYCGDVFVFRAKRLDRLRCIYWDGSGMILVTKWLEAGKFVWP
PIRDGAMQMSSQEFSLLLAGIDWTRVKRNAVKRPTKAG

Sequences:

>Translated_118_residues
MIGVSPNAVKIMVATQPVDFRRGMNGLVALVASALAADPYCGDVFVFRAKRLDRLRCIYWDGSGMILVTKWLEAGKFVWP
PIRDGAMQMSSQEFSLLLAGIDWTRVKRNAVKRPTKAG
>Mature_118_residues
MIGVSPNAVKIMVATQPVDFRRGMNGLVALVASALAADPYCGDVFVFRAKRLDRLRCIYWDGSGMILVTKWLEAGKFVWP
PIRDGAMQMSSQEFSLLLAGIDWTRVKRNAVKRPTKAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008878 [H]

Pfam domain/function: PF05717 Transposase_34 [H]

EC number: NA

Molecular weight: Translated: 13073; Mature: 13073

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVSPNAVKIMVATQPVDFRRGMNGLVALVASALAADPYCGDVFVFRAKRLDRLRCIYW
CCCCCCCCEEEEEECCCCHHHHCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEE
DGSGMILVTKWLEAGKFVWPPIRDGAMQMSSQEFSLLLAGIDWTRVKRNAVKRPTKAG
CCCCEEEEEEEHHCCCEECCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIGVSPNAVKIMVATQPVDFRRGMNGLVALVASALAADPYCGDVFVFRAKRLDRLRCIYW
CCCCCCCCEEEEEECCCCHHHHCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEE
DGSGMILVTKWLEAGKFVWPPIRDGAMQMSSQEFSLLLAGIDWTRVKRNAVKRPTKAG
CCCCEEEEEEEHHCCCEECCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]