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The map label for this gene is 150396438

Identifier: 150396438

GI number: 150396438

Start: 1303876

End: 1304346

Strand: Direct

Name: 150396438

Synonym: Smed_1220

Alternate gene names: NA

Gene position: 1303876-1304346 (Clockwise)

Preceding gene: 150396432

Following gene: 150396439

Centisome position: 34.48

GC content: 64.12

Gene sequence:

>471_bases
ATGGTTGGAGATCGCGCTGGTGCCATGCTTGGAGTCATGCATGAAGCCATGGATGAAGCCAGGCATGATGGAGCCTACCG
GCGGATCGAGCTGATCACCGGGCGACGCCAGCGGCGGAATTGGACCGACGAGGAGAAGGCGCGGATCCTTGCGGAGAGCG
CTGAACCCGGAGTGAACATCTCGGCTGTTGCCCGGCGTTGGGGCGTCAATCGCGGCTTGCTGAATGTCTGGCGCCGCGAA
GCCGGGCTGACCTCTCGACGATCAGAGCAAGCCTGCGCACAGCAGGCGATGTTCGTGCCGGTGACAGTGGTTGGAGAACG
AACGCTTCACCAGAGCGCGTCGTCGGATATCGCTTCCGTCGCTTCCGGTCGAATTGAGATCGAGATTGCCGGGGCGCGCA
TGACCGTGATCGGCTCGGTGGCGCCCGAGTTGGCGCAGGCGATGGTGGCGGCGTTGCGAGGACGCCGGTGA

Upstream 100 bases:

>100_bases
TCATGATCGTCGACTTGCCGTGAGCGCTACGAACAGCCCACCTTGCCTTTGCTGATTGAGACCGCGAGATAAGCTCCGTC
ATCGACAGGAGTGGAACGGG

Downstream 100 bases:

>100_bases
TCGGAGTTTCGCCGAATGCCGTGAAGATCATGGTGGCGACGCAGCCTGTCGACTTCCGGCGCGGCATGAATGGCCTGGTG
GCTTTGGTGGCATCAGCGCT

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MVGDRAGAMLGVMHEAMDEARHDGAYRRIELITGRRQRRNWTDEEKARILAESAEPGVNISAVARRWGVNRGLLNVWRRE
AGLTSRRSEQACAQQAMFVPVTVVGERTLHQSASSDIASVASGRIEIEIAGARMTVIGSVAPELAQAMVAALRGRR

Sequences:

>Translated_156_residues
MVGDRAGAMLGVMHEAMDEARHDGAYRRIELITGRRQRRNWTDEEKARILAESAEPGVNISAVARRWGVNRGLLNVWRRE
AGLTSRRSEQACAQQAMFVPVTVVGERTLHQSASSDIASVASGRIEIEIAGARMTVIGSVAPELAQAMVAALRGRR
>Mature_156_residues
MVGDRAGAMLGVMHEAMDEARHDGAYRRIELITGRRQRRNWTDEEKARILAESAEPGVNISAVARRWGVNRGLLNVWRRE
AGLTSRRSEQACAQQAMFVPVTVVGERTLHQSASSDIASVASGRIEIEIAGARMTVIGSVAPELAQAMVAALRGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 17062; Mature: 17062

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGDRAGAMLGVMHEAMDEARHDGAYRRIELITGRRQRRNWTDEEKARILAESAEPGVNI
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCCCH
SAVARRWGVNRGLLNVWRREAGLTSRRSEQACAQQAMFVPVTVVGERTLHQSASSDIASV
HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHH
ASGRIEIEIAGARMTVIGSVAPELAQAMVAALRGRR
HCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVGDRAGAMLGVMHEAMDEARHDGAYRRIELITGRRQRRNWTDEEKARILAESAEPGVNI
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCCCCCH
SAVARRWGVNRGLLNVWRREAGLTSRRSEQACAQQAMFVPVTVVGERTLHQSASSDIASV
HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHH
ASGRIEIEIAGARMTVIGSVAPELAQAMVAALRGRR
HCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]