| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is kefBC [H]
Identifier: 150396430
GI number: 150396430
Start: 1294901
End: 1296712
Strand: Direct
Name: kefBC [H]
Synonym: Smed_1212
Alternate gene names: 150396430
Gene position: 1294901-1296712 (Clockwise)
Preceding gene: 150396429
Following gene: 150396431
Centisome position: 34.24
GC content: 56.9
Gene sequence:
>1812_bases ATGGCAGTTGAATCTCACGGACCAGACCTCCTACCAGTCATCGCGCTACTCGGCGCGGGGGTTGTTGCGGCCACGGTCTT CAAGCGATCTGGACTTGGCTCCGTCCTGGGTTATCTCGCCGCGGGCGTCGTCATCGGTCCATTCGGGCTTCGGGTATTTC AAGAGCCGGCATCCATTCTCCATTTCGCTGAGCTGGGCGTCGTAATGTTTCTCTTCCTGATAGGCCTTGAGATGAGGCCT TCACGACTTTGGGGTTTGCGCAGGCAGATTTTTGGCCTGGGAGTCCTTCAGGTCGGCGTCTGCATTCTTTGTCTCACGGC AGTCGGTATGGCGACTGGTTTCCCGGTGGCGCCGTCCTTCGTTGCGGGGACGGGATTCGTGCTTACATCGACGGCAATTG TGATGCAGCTCCTTGAGGAGCGAGGTACGATCTCTACGCCACCTGGCCAGCGCATCGTAGCCATCCTGCTCCTTGAGGAT TTAGCGATCGTACCGCTCCTCGCGTTGGTCGCCTTTCTGGCCCCCATCGTTCCTGGCACGACTTCGAGTGCTCAAGGAAT CGACTGGATTGCAATAGGCGTGGGCGTCGCCGCGATAGCGGGAGTCGTAGTCTCCGGCTTGTATCTCCTAAACCCTCTCT TTGGGCTTATAGCCGGCGCACAGGCGCGTGAGGTTATGACGGCCGCAGCGTTGCTCGTCGTACTTGGCGCCGCTTATGTG ATGCAGCTTGGCGGGCTGTCCATGGCGATGGGCGCGTTCCTTGCAGGCGTTCTCCTGTCCGAGTCAACGTTCCGACACCA GCTAGAAGTCGATATCGAACCCTTTCGCGGTATCCTCCTGGGTCTCTTCTTCCTCGCTGTCGGTATGTCTCTTGAGTTGG GTGTCGTGGCGGCCGACTGGGAGCTGATTGCGTTCTATGTTGCCGCATTCATGATCGTGAAAGGGCTAGCAGTTTACGGC TGTGCTCGCCTTCTTAAAAGTACGCACTGGGAAGCCGCCGAGCGAGCCGTTCTTATGGCCCAGGGTGGGGAATTTGCCTT CGTACTCTATGCATCGGCTCTCTCATTCGGGATCATCTCTTCCGACCAGAATGCTGTTCTGACAGCAATCGTCATCCTGT CGATGGTTCTCACGCCGCTTCTAGTCTTGATCTTGAAGCGGTTCGAAGGAGCGAGTTCTTCACGGGTCGATGGCTACGCA ATTTCCGGCAATTTAAGAGGTACGGTTCTGATCATCGGCTTCGGCCGGGTCGGACAGATAGTCAGTCAGCTTCTGCTATC CCGAGGTCACGAGATTTCCATCATCGACACCGATGTCGAGATGATCAACATAGCTCGTGAATTTCAGTTCGACGTCTACT ACGGCGACGGCACACGTCTCGATATCCTTGAGACGGCGGGTGCTGGTGAGGCGAAGGTGATAGCTGTGTGCGTGGACAAC GGCGACGACGTCACAGCTATTGTACGCCTGCTCAAAGCTGAATTTCCTCTGGCAACAATTGTCGCCCGAGCAACGGATCG GCGGCATGCACTCGACCTGGTCAGATCGGGTGCCGATGTCCAGATCCGAGAAACCTTTGAGTCCGCGATGGCGCTGGGCA ACAAGGCGCTTGAAATTCTTGGGGCCACGCCGGAAGAAATGTCGAATCTGGCGAAGGGATTTCGGGAGCGTGATGGCGCG CGGCTTGAACTCGAATTGGTTGGAGGGATGTATGCTGGCCGCGAATTCTTCAGTGGAAGGACTCACGCATCGAAAATCAC GGCGGAGATTGATGCTTCCGAGAAAATGCGGGACTTCAGGTCGACCCCGTAG
Upstream 100 bases:
>100_bases ACGAGATTGCACTTGGAGACAGCGAGGAAGCCTATCTGATCGCCTCCGGCGACGCGGAGGGTGACGCTGAGATACAAAGG TTAGAAGTCGGAGCAGTTCG
Downstream 100 bases:
>100_bases AGCGAGTTGAGAATGTTCAATGCCTATAGACCTCGAAAAGGTTAGATCAGAGACACCGGGTATCCGGAACCGAATCCACC TGAACAACGCTGGGGCAGCT
Product: potassium efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MAVESHGPDLLPVIALLGAGVVAATVFKRSGLGSVLGYLAAGVVIGPFGLRVFQEPASILHFAELGVVMFLFLIGLEMRP SRLWGLRRQIFGLGVLQVGVCILCLTAVGMATGFPVAPSFVAGTGFVLTSTAIVMQLLEERGTISTPPGQRIVAILLLED LAIVPLLALVAFLAPIVPGTTSSAQGIDWIAIGVGVAAIAGVVVSGLYLLNPLFGLIAGAQAREVMTAAALLVVLGAAYV MQLGGLSMAMGAFLAGVLLSESTFRHQLEVDIEPFRGILLGLFFLAVGMSLELGVVAADWELIAFYVAAFMIVKGLAVYG CARLLKSTHWEAAERAVLMAQGGEFAFVLYASALSFGIISSDQNAVLTAIVILSMVLTPLLVLILKRFEGASSSRVDGYA ISGNLRGTVLIIGFGRVGQIVSQLLLSRGHEISIIDTDVEMINIAREFQFDVYYGDGTRLDILETAGAGEAKVIAVCVDN GDDVTAIVRLLKAEFPLATIVARATDRRHALDLVRSGADVQIRETFESAMALGNKALEILGATPEEMSNLAKGFRERDGA RLELELVGGMYAGREFFSGRTHASKITAEIDASEKMRDFRSTP
Sequences:
>Translated_603_residues MAVESHGPDLLPVIALLGAGVVAATVFKRSGLGSVLGYLAAGVVIGPFGLRVFQEPASILHFAELGVVMFLFLIGLEMRP SRLWGLRRQIFGLGVLQVGVCILCLTAVGMATGFPVAPSFVAGTGFVLTSTAIVMQLLEERGTISTPPGQRIVAILLLED LAIVPLLALVAFLAPIVPGTTSSAQGIDWIAIGVGVAAIAGVVVSGLYLLNPLFGLIAGAQAREVMTAAALLVVLGAAYV MQLGGLSMAMGAFLAGVLLSESTFRHQLEVDIEPFRGILLGLFFLAVGMSLELGVVAADWELIAFYVAAFMIVKGLAVYG CARLLKSTHWEAAERAVLMAQGGEFAFVLYASALSFGIISSDQNAVLTAIVILSMVLTPLLVLILKRFEGASSSRVDGYA ISGNLRGTVLIIGFGRVGQIVSQLLLSRGHEISIIDTDVEMINIAREFQFDVYYGDGTRLDILETAGAGEAKVIAVCVDN GDDVTAIVRLLKAEFPLATIVARATDRRHALDLVRSGADVQIRETFESAMALGNKALEILGATPEEMSNLAKGFRERDGA RLELELVGGMYAGREFFSGRTHASKITAEIDASEKMRDFRSTP >Mature_602_residues AVESHGPDLLPVIALLGAGVVAATVFKRSGLGSVLGYLAAGVVIGPFGLRVFQEPASILHFAELGVVMFLFLIGLEMRPS RLWGLRRQIFGLGVLQVGVCILCLTAVGMATGFPVAPSFVAGTGFVLTSTAIVMQLLEERGTISTPPGQRIVAILLLEDL AIVPLLALVAFLAPIVPGTTSSAQGIDWIAIGVGVAAIAGVVVSGLYLLNPLFGLIAGAQAREVMTAAALLVVLGAAYVM QLGGLSMAMGAFLAGVLLSESTFRHQLEVDIEPFRGILLGLFFLAVGMSLELGVVAADWELIAFYVAAFMIVKGLAVYGC ARLLKSTHWEAAERAVLMAQGGEFAFVLYASALSFGIISSDQNAVLTAIVILSMVLTPLLVLILKRFEGASSSRVDGYAI SGNLRGTVLIIGFGRVGQIVSQLLLSRGHEISIIDTDVEMINIAREFQFDVYYGDGTRLDILETAGAGEAKVIAVCVDNG DDVTAIVRLLKAEFPLATIVARATDRRHALDLVRSGADVQIRETFESAMALGNKALEILGATPEEMSNLAKGFRERDGAR LELELVGGMYAGREFFSGRTHASKITAEIDASEKMRDFRSTP
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=358, Percent_Identity=25.1396648044693, Blast_Score=74, Evalue=5e-13, Organism=Escherichia coli, GI1789749, Length=602, Percent_Identity=40.3654485049834, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1786232, Length=568, Percent_Identity=40.1408450704225, Blast_Score=376, Evalue=1e-105, Organism=Escherichia coli, GI1786685, Length=530, Percent_Identity=26.9811320754717, Blast_Score=140, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 63744; Mature: 63613
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVESHGPDLLPVIALLGAGVVAATVFKRSGLGSVLGYLAAGVVIGPFGLRVFQEPASIL CCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH HFAELGVVMFLFLIGLEMRPSRLWGLRRQIFGLGVLQVGVCILCLTAVGMATGFPVAPSF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH VAGTGFVLTSTAIVMQLLEERGTISTPPGQRIVAILLLEDLAIVPLLALVAFLAPIVPGT HCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TSSAQGIDWIAIGVGVAAIAGVVVSGLYLLNPLFGLIAGAQAREVMTAAALLVVLGAAYV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MQLGGLSMAMGAFLAGVLLSESTFRHQLEVDIEPFRGILLGLFFLAVGMSLELGVVAADW HHHCCHHHHHHHHHHHHHHHCHHHHHEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCH ELIAFYVAAFMIVKGLAVYGCARLLKSTHWEAAERAVLMAQGGEFAFVLYASALSFGIIS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEECCCCEEEHHHHHHHHHHCCC SDQNAVLTAIVILSMVLTPLLVLILKRFEGASSSRVDGYAISGNLRGTVLIIGFGRVGQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCHHHHH VSQLLLSRGHEISIIDTDVEMINIAREFQFDVYYGDGTRLDILETAGAGEAKVIAVCVDN HHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEEEEECC GDDVTAIVRLLKAEFPLATIVARATDRRHALDLVRSGADVQIRETFESAMALGNKALEIL CCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHCHHHHHHH GATPEEMSNLAKGFRERDGARLELELVGGMYAGREFFSGRTHASKITAEIDASEKMRDFR CCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCHHHHHEEECCCHHHHHHHC STP CCC >Mature Secondary Structure AVESHGPDLLPVIALLGAGVVAATVFKRSGLGSVLGYLAAGVVIGPFGLRVFQEPASIL CCCCCCCCHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH HFAELGVVMFLFLIGLEMRPSRLWGLRRQIFGLGVLQVGVCILCLTAVGMATGFPVAPSF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH VAGTGFVLTSTAIVMQLLEERGTISTPPGQRIVAILLLEDLAIVPLLALVAFLAPIVPGT HCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TSSAQGIDWIAIGVGVAAIAGVVVSGLYLLNPLFGLIAGAQAREVMTAAALLVVLGAAYV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MQLGGLSMAMGAFLAGVLLSESTFRHQLEVDIEPFRGILLGLFFLAVGMSLELGVVAADW HHHCCHHHHHHHHHHHHHHHCHHHHHEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCH ELIAFYVAAFMIVKGLAVYGCARLLKSTHWEAAERAVLMAQGGEFAFVLYASALSFGIIS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEECCCCEEEHHHHHHHHHHCCC SDQNAVLTAIVILSMVLTPLLVLILKRFEGASSSRVDGYAISGNLRGTVLIIGFGRVGQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCHHHHH VSQLLLSRGHEISIIDTDVEMINIAREFQFDVYYGDGTRLDILETAGAGEAKVIAVCVDN HHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEEEEECC GDDVTAIVRLLKAEFPLATIVARATDRRHALDLVRSGADVQIRETFESAMALGNKALEIL CCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHCHHHHHHH GATPEEMSNLAKGFRERDGARLELELVGGMYAGREFFSGRTHASKITAEIDASEKMRDFR CCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCHHHHHEEECCCHHHHHHHC STP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]