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The map label for this gene is scpA [H]

Identifier: 150396380

GI number: 150396380

Start: 1238891

End: 1239709

Strand: Direct

Name: scpA [H]

Synonym: Smed_1161

Alternate gene names: 150396380

Gene position: 1238891-1239709 (Clockwise)

Preceding gene: 150396379

Following gene: 150396381

Centisome position: 32.76

GC content: 61.78

Gene sequence:

>819_bases
ATGGAGCCTTTGTGGCAGGACGAGTCTGCGCGTCGCGGATTGCACGAGGACGAGCTCGTCATCGACATTGCCGGTTTTGA
AGGTCCGCTGGACCTCTTGCTGCACCTCGCGCGCAGCCAACGCGTCGATCTTTCGCGTATCTCGGTGCTGGCTCTCGCGG
AACAATATATCGCCTTTGTGGAGCGGGCACGGTCCATCCGGATCGAACTTGCGGCCGACTATCTCGTCATGGCCGCATGG
CTTGCCTATCTCAAGTCTCGCCTGCTTATCCCGCAGCAGGCGAAGGACGAAGGGCCATCGGGCGAGGAACTGGCCTCGGC
GCTTGCTTATCGTCTGAAGCGCCTGGAAGCGATGCGCGACGCTGCGACGAAGCTCGTAAACAGGAATCGCCTTGGCCGGG
ACATCTTCGTGCGCGGCGCCCCCGAGCACATCCTCACGGAAAGAAAGTCAGAATACGAAGCTTCGCTTTACGACCTGTTG
ACGGCCTATGCGACGCTCAGGCAGCGCGAGGCGATAACCCAGGTCACGATCGAGAGACGGCATGTCTGGTCGCTCGGCGA
TGCGCGTTTGATCCTGGCGCGGATGGTCGGCAGCCTTGACGACTGGACGGCGCTGGATCACTTCCTGATCCGCTACATGA
CGAGCCCGCAGGAGCGCGCGACGGCAATCGCAAGCTCTTTCGCTGCATCGCTCGAAATGGTGCGCGAGGGGCAATTGGAA
ATCCGCCAGGAGGGCGCTTTCACGCCGATTTATCTGCGGCGCGGACCAAATCCGATCGATGCGGCAACCCTTGCGGAGAT
GGAGGCGGCGCGTGGCTGA

Upstream 100 bases:

>100_bases
CTGCTGAGCCTGAGTGAATGGGACCGTTGTTGAAAGGGCAAGGGTCGGGGTCGTGACCAATTCGGGCGAAAGGCAAGTAC
AGTCTTCCGTGAAGGCGCCA

Downstream 100 bases:

>100_bases
AGCCCAGAAGATCCTGCCGGTGTTACCGGATGGAGAGGACGATGCCGAAGAAGCCTCGGTCGCGCCAAGGCTCGAGCGGG
AGGCAGAGCGGATCGCCGAA

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MEPLWQDESARRGLHEDELVIDIAGFEGPLDLLLHLARSQRVDLSRISVLALAEQYIAFVERARSIRIELAADYLVMAAW
LAYLKSRLLIPQQAKDEGPSGEELASALAYRLKRLEAMRDAATKLVNRNRLGRDIFVRGAPEHILTERKSEYEASLYDLL
TAYATLRQREAITQVTIERRHVWSLGDARLILARMVGSLDDWTALDHFLIRYMTSPQERATAIASSFAASLEMVREGQLE
IRQEGAFTPIYLRRGPNPIDAATLAEMEAARG

Sequences:

>Translated_272_residues
MEPLWQDESARRGLHEDELVIDIAGFEGPLDLLLHLARSQRVDLSRISVLALAEQYIAFVERARSIRIELAADYLVMAAW
LAYLKSRLLIPQQAKDEGPSGEELASALAYRLKRLEAMRDAATKLVNRNRLGRDIFVRGAPEHILTERKSEYEASLYDLL
TAYATLRQREAITQVTIERRHVWSLGDARLILARMVGSLDDWTALDHFLIRYMTSPQERATAIASSFAASLEMVREGQLE
IRQEGAFTPIYLRRGPNPIDAATLAEMEAARG
>Mature_272_residues
MEPLWQDESARRGLHEDELVIDIAGFEGPLDLLLHLARSQRVDLSRISVLALAEQYIAFVERARSIRIELAADYLVMAAW
LAYLKSRLLIPQQAKDEGPSGEELASALAYRLKRLEAMRDAATKLVNRNRLGRDIFVRGAPEHILTERKSEYEASLYDLL
TAYATLRQREAITQVTIERRHVWSLGDARLILARMVGSLDDWTALDHFLIRYMTSPQERATAIASSFAASLEMVREGQLE
IRQEGAFTPIYLRRGPNPIDAATLAEMEAARG

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30760; Mature: 30760

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLWQDESARRGLHEDELVIDIAGFEGPLDLLLHLARSQRVDLSRISVLALAEQYIAFV
CCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERARSIRIELAADYLVMAAWLAYLKSRLLIPQQAKDEGPSGEELASALAYRLKRLEAMRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AATKLVNRNRLGRDIFVRGAPEHILTERKSEYEASLYDLLTAYATLRQREAITQVTIERR
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVWSLGDARLILARMVGSLDDWTALDHFLIRYMTSPQERATAIASSFAASLEMVREGQLE
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
IRQEGAFTPIYLRRGPNPIDAATLAEMEAARG
HHHCCCCCEEEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEPLWQDESARRGLHEDELVIDIAGFEGPLDLLLHLARSQRVDLSRISVLALAEQYIAFV
CCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERARSIRIELAADYLVMAAWLAYLKSRLLIPQQAKDEGPSGEELASALAYRLKRLEAMRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AATKLVNRNRLGRDIFVRGAPEHILTERKSEYEASLYDLLTAYATLRQREAITQVTIERR
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVWSLGDARLILARMVGSLDDWTALDHFLIRYMTSPQERATAIASSFAASLEMVREGQLE
HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
IRQEGAFTPIYLRRGPNPIDAATLAEMEAARG
HHHCCCCCEEEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]