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The map label for this gene is ydjA [H]

Identifier: 150396277

GI number: 150396277

Start: 1124754

End: 1125341

Strand: Direct

Name: ydjA [H]

Synonym: Smed_1056

Alternate gene names: 150396277

Gene position: 1124754-1125341 (Clockwise)

Preceding gene: 150396275

Following gene: 150396278

Centisome position: 29.74

GC content: 62.24

Gene sequence:

>588_bases
ATGAAAACCGAAATAAAGCTTGTCGATTATCTTGCATGCCGCAGATCCATTCCAGCCTTCCAGATGGGCGAGCCGGGACC
GGGCAGGGCAGAGGTCGAGGAGATGCTGAAGCTGGCGTCACGCGCCCCCGATCACGGCAAACTGGCTCCGTGGCGCTTCA
TCGTCTATCGGGGCGAGGAAAGGGCGCGCATCAGCGCCGAACTGAAGAAAATGGCCCTTGCCGCCAAGCCGGACATGCCG
GACGAGATGATCAAGGTCGAGGAGACCCGGCTTACGCGCGCACCCGTCGTCGTCGCCGTGGTCAGCAAGGCGGCGCCGCA
TTTCAAGATCCCCGAATGGGAGCAGCAGATGTCGGCCGGAGCCGTTTGCCTCAATCTGCTGATGGCCGCGAATGCCCTTG
GCTTTGCTTCGAACTGGCTGACGGAATGGTATGCCTTCGATGAGCGGGCCTACCCGCTTCTCGGCGTGGCACCGGGGGAG
AGGATCGCAGGCTTCATTCACATCGGTACGGCCATGGTACCGCCGACGGAGCGGCCCCGGCCCGAACTCGAGGAAATCGT
CACCTGGGTCGGAAAGGGGGATGATTGA

Upstream 100 bases:

>100_bases
GAGAGCAGTTGACTTCTTGACTGTGCGACTCCACTTGGGACGCCGGTATGGCATTTTCGTGGCCGTCGGTCCGGCCGCAA
ATTAGTGGAATTCGCTCAAC

Downstream 100 bases:

>100_bases
TGTTCTATGATACGGCCGGTAACGGGCACGGCCTGCCGCACGATCCCTTCAAGGCGATCGTGTCGCCGAGACCTATCGGC
TGGATCGGCACGCGCAGGGC

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKTEIKLVDYLACRRSIPAFQMGEPGPGRAEVEEMLKLASRAPDHGKLAPWRFIVYRGEERARISAELKKMALAAKPDMP
DEMIKVEETRLTRAPVVVAVVSKAAPHFKIPEWEQQMSAGAVCLNLLMAANALGFASNWLTEWYAFDERAYPLLGVAPGE
RIAGFIHIGTAMVPPTERPRPELEEIVTWVGKGDD

Sequences:

>Translated_195_residues
MKTEIKLVDYLACRRSIPAFQMGEPGPGRAEVEEMLKLASRAPDHGKLAPWRFIVYRGEERARISAELKKMALAAKPDMP
DEMIKVEETRLTRAPVVVAVVSKAAPHFKIPEWEQQMSAGAVCLNLLMAANALGFASNWLTEWYAFDERAYPLLGVAPGE
RIAGFIHIGTAMVPPTERPRPELEEIVTWVGKGDD
>Mature_195_residues
MKTEIKLVDYLACRRSIPAFQMGEPGPGRAEVEEMLKLASRAPDHGKLAPWRFIVYRGEERARISAELKKMALAAKPDMP
DEMIKVEETRLTRAPVVVAVVSKAAPHFKIPEWEQQMSAGAVCLNLLMAANALGFASNWLTEWYAFDERAYPLLGVAPGE
RIAGFIHIGTAMVPPTERPRPELEEIVTWVGKGDD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=163, Percent_Identity=36.1963190184049, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21698; Mature: 21698

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEIKLVDYLACRRSIPAFQMGEPGPGRAEVEEMLKLASRAPDHGKLAPWRFIVYRGEE
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
RARISAELKKMALAAKPDMPDEMIKVEETRLTRAPVVVAVVSKAAPHFKIPEWEQQMSAG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHEEHHHHCCCCCCCCHHHHHHHHH
AVCLNLLMAANALGFASNWLTEWYAFDERAYPLLGVAPGERIAGFIHIGTAMVPPTERPR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHEEEEEECCCCCCCCCCCC
PELEEIVTWVGKGDD
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTEIKLVDYLACRRSIPAFQMGEPGPGRAEVEEMLKLASRAPDHGKLAPWRFIVYRGEE
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
RARISAELKKMALAAKPDMPDEMIKVEETRLTRAPVVVAVVSKAAPHFKIPEWEQQMSAG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHEEHHHHCCCCCCCCHHHHHHHHH
AVCLNLLMAANALGFASNWLTEWYAFDERAYPLLGVAPGERIAGFIHIGTAMVPPTERPR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHEEEEEECCCCCCCCCCCC
PELEEIVTWVGKGDD
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]