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The map label for this gene is 150396267

Identifier: 150396267

GI number: 150396267

Start: 1116345

End: 1116773

Strand: Direct

Name: 150396267

Synonym: Smed_1046

Alternate gene names: NA

Gene position: 1116345-1116773 (Clockwise)

Preceding gene: 150396266

Following gene: 150396271

Centisome position: 29.52

GC content: 54.78

Gene sequence:

>429_bases
ATGTCAGTGAAAGCGATTCTCAACGAAAAAGGTCACGACGTCATCACGGTTACGGAACAGGTGACGGTTCAACAGGCCGC
GACTTTGCTGCATGAAAATCATATTGGTGCCGTTGTCGTCGTCGATCCCGAGGACCAGATCGTCGGCATCATGACGGAGC
GCGATATCGTTGCCTCGATTGCCAGATATGGCGCGAGCTGTCTCGATAAGCCGGTTTCGTCCGTCATGTGGCAGAACGTC
TATTGCTGCCGCGAGGAGATGTCGGTCGACACCCTGATGGAGATGATGAGCAAACTTCGTGCGCGTCATCTTCCTGTGGA
GCGGGAGGGCCGCTTGGCAGGCATTATCTCGATCGGAGACGTGGTCAAGTATCACATACGGGCGATCGAGAACGAGGCCG
AACAGATCAAGGCCTATATCTCCGGTTGA

Upstream 100 bases:

>100_bases
ACTGTCACGCGGTCTTCCTTCCACCGGGGAAAGTGCAGCGACCGACATGGCCGGACCCTCGTCCCGTCGGTCCGATTTAG
TCGCAACGGGAGATGTGCGC

Downstream 100 bases:

>100_bases
GCCGAATTTGGGGCCAGCGCTTTTTGGAATGTTGGCCTCGACCCCCTCAACGCAGCAGCGTTTCCTGCATGCGCCTGATC
TCGGAGAGTTTGACCTTGGC

Product: signal-transduction protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSVKAILNEKGHDVITVTEQVTVQQAATLLHENHIGAVVVVDPEDQIVGIMTERDIVASIARYGASCLDKPVSSVMWQNV
YCCREEMSVDTLMEMMSKLRARHLPVEREGRLAGIISIGDVVKYHIRAIENEAEQIKAYISG

Sequences:

>Translated_142_residues
MSVKAILNEKGHDVITVTEQVTVQQAATLLHENHIGAVVVVDPEDQIVGIMTERDIVASIARYGASCLDKPVSSVMWQNV
YCCREEMSVDTLMEMMSKLRARHLPVEREGRLAGIISIGDVVKYHIRAIENEAEQIKAYISG
>Mature_141_residues
SVKAILNEKGHDVITVTEQVTVQQAATLLHENHIGAVVVVDPEDQIVGIMTERDIVASIARYGASCLDKPVSSVMWQNVY
CCREEMSVDTLMEMMSKLRARHLPVEREGRLAGIISIGDVVKYHIRAIENEAEQIKAYISG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15763; Mature: 15632

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKAILNEKGHDVITVTEQVTVQQAATLLHENHIGAVVVVDPEDQIVGIMTERDIVASI
CCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHHH
ARYGASCLDKPVSSVMWQNVYCCREEMSVDTLMEMMSKLRARHLPVEREGRLAGIISIGD
HHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHH
VVKYHIRAIENEAEQIKAYISG
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVKAILNEKGHDVITVTEQVTVQQAATLLHENHIGAVVVVDPEDQIVGIMTERDIVASI
CCHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHHH
ARYGASCLDKPVSSVMWQNVYCCREEMSVDTLMEMMSKLRARHLPVEREGRLAGIISIGD
HHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHH
VVKYHIRAIENEAEQIKAYISG
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA