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The map label for this gene is bphA1 [H]

Identifier: 150395708

GI number: 150395708

Start: 524224

End: 525468

Strand: Direct

Name: bphA1 [H]

Synonym: Smed_0483

Alternate gene names: 150395708

Gene position: 524224-525468 (Clockwise)

Preceding gene: 150395704

Following gene: 150395709

Centisome position: 13.86

GC content: 60.24

Gene sequence:

>1245_bases
ATGGAAATTCAGACCGAAATGCTACGCAAGCTGAAGACCCGTCGCGAAGGCTACAGCCTCGACCGCGCCTTCTACGTCGA
TCCCGGCTATTACCGTCAGGATCTGGAGCAAATCTGGTACAGGGACTGGTTGTTCATCGGGCATGATTGCGAAATTCCGC
GCCCGGGGAACTATTTCACCGTGCAGGTGGGGGAGTACCCCGTAGTGCTCGTGCGCGACCGCCAGGGCGCTATTCGTGCT
TTGCACAATTCGTGCCGTCACCGCGGCTCCCGCGTCTGCACGCAGCACAGAGGTTCATCCGCCAAACTCGTTTGTCCCTA
CCACCAATGGACCTACGAGCTCGACGGCCGGCTGCTCTTTGCGCGACAGATGCCCGAGGGATTCGATCCGGCCGAACACA
GTCTGAAGGCCATCCACTGCGAGACGGTCGGCGGCTACATCTTCATCAGTCTTGCCGATGAACCGGTGGACTTCCGGCAG
TTCCGCGAAACGGTCGCGGCCTATCTCGCGCCCCATCGCCTTGGGGAGACCAAGGTCGCCTTCGAGAGCACCATTGTCGA
GAAAGGCAACTGGAAGCTCGTCTGGGAGAACAATCGGGAGTGCTATCACTGTGCCGCCAATCACCCGGAGCTCTGCCGCA
CCTATCCGGAGGCGCCGACAGTGACCGGCGTTCAGGGAGCGATGGATGACCCCGAAATCGGTGCCCATTGGCGCAAATGC
GAGAATGCGGGCCTTCCCAGTGCCTTCAGGATCGCGCCAACCGGCCAGTTTCGCATGACCAGAATGCCGCTGATCAACGG
AGCCGAGAGTTATACGATGTCGGGGCAAAGCGCCGTGCTCAAGCCACTTTCCCCGCAGGTGAATGCCAGCGGCATCGGCA
CTCTGCTTCTCTTCCATTATCCCACCACCTGGAACCATATCCTCGGTGATCACGCGATCACCTTTCGCGTGCTGCCGCTC
GGTCCGGAATTGACTGAGGTTACGACCAAGTGGCTCGTCAACAAGGAGGCGGTCGAGGGCGTCGACTATACCATCGAGGA
TCTGACGCATGTCTGGACGGAAACCAACGACCAGGACCGGCAGATCGTCGAGGAAAACGCCTTCGGCATCCGTTCTCCGG
CCTATGAACCAGGCCCCTATTCGGCCGAGCACGAGGGCGGCGTCATGCAGTTCGTCGAGTGGTATTCGAGTTTCATGCTG
GACCGCCTTCAGGGCGGAGCCACGCATCTTTCGCGGGTCGCATGA

Upstream 100 bases:

>100_bases
GGCGGGCAGCCGGATCGGAGCCAATTGCGTTGCGGGTCCACAGGACCGGCGCGGGTTCCAGTCCTGCCTGTCCGAAACGG
CGGAAAACGAGGATAAGGGC

Downstream 100 bases:

>100_bases
CCATGGAGATGCCTCGCGCCTTTCACCATTTCGACGAGCTCGACCCCTGGAGAGACCGGCAGCACATGCTGCAGTGCGTT
TCGGTGGCCACGGAGACGGC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Biphenyl 2,3-dioxygenase [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MEIQTEMLRKLKTRREGYSLDRAFYVDPGYYRQDLEQIWYRDWLFIGHDCEIPRPGNYFTVQVGEYPVVLVRDRQGAIRA
LHNSCRHRGSRVCTQHRGSSAKLVCPYHQWTYELDGRLLFARQMPEGFDPAEHSLKAIHCETVGGYIFISLADEPVDFRQ
FRETVAAYLAPHRLGETKVAFESTIVEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWRKC
ENAGLPSAFRIAPTGQFRMTRMPLINGAESYTMSGQSAVLKPLSPQVNASGIGTLLLFHYPTTWNHILGDHAITFRVLPL
GPELTEVTTKWLVNKEAVEGVDYTIEDLTHVWTETNDQDRQIVEENAFGIRSPAYEPGPYSAEHEGGVMQFVEWYSSFML
DRLQGGATHLSRVA

Sequences:

>Translated_414_residues
MEIQTEMLRKLKTRREGYSLDRAFYVDPGYYRQDLEQIWYRDWLFIGHDCEIPRPGNYFTVQVGEYPVVLVRDRQGAIRA
LHNSCRHRGSRVCTQHRGSSAKLVCPYHQWTYELDGRLLFARQMPEGFDPAEHSLKAIHCETVGGYIFISLADEPVDFRQ
FRETVAAYLAPHRLGETKVAFESTIVEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWRKC
ENAGLPSAFRIAPTGQFRMTRMPLINGAESYTMSGQSAVLKPLSPQVNASGIGTLLLFHYPTTWNHILGDHAITFRVLPL
GPELTEVTTKWLVNKEAVEGVDYTIEDLTHVWTETNDQDRQIVEENAFGIRSPAYEPGPYSAEHEGGVMQFVEWYSSFML
DRLQGGATHLSRVA
>Mature_414_residues
MEIQTEMLRKLKTRREGYSLDRAFYVDPGYYRQDLEQIWYRDWLFIGHDCEIPRPGNYFTVQVGEYPVVLVRDRQGAIRA
LHNSCRHRGSRVCTQHRGSSAKLVCPYHQWTYELDGRLLFARQMPEGFDPAEHSLKAIHCETVGGYIFISLADEPVDFRQ
FRETVAAYLAPHRLGETKVAFESTIVEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWRKC
ENAGLPSAFRIAPTGQFRMTRMPLINGAESYTMSGQSAVLKPLSPQVNASGIGTLLLFHYPTTWNHILGDHAITFRVLPL
GPELTEVTTKWLVNKEAVEGVDYTIEDLTHVWTETNDQDRQIVEENAFGIRSPAYEPGPYSAEHEGGVMQFVEWYSSFML
DRLQGGATHLSRVA

Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788888, Length=217, Percent_Identity=33.6405529953917, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1788103, Length=199, Percent_Identity=28.1407035175879, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR015879
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]

EC number: =1.14.12.18 [H]

Molecular weight: Translated: 47215; Mature: 47215

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIQTEMLRKLKTRREGYSLDRAFYVDPGYYRQDLEQIWYRDWLFIGHDCEIPRPGNYFT
CCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEEE
VQVGEYPVVLVRDRQGAIRALHNSCRHRGSRVCTQHRGSSAKLVCPYHQWTYELDGRLLF
EEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCEEEE
ARQMPEGFDPAEHSLKAIHCETVGGYIFISLADEPVDFRQFRETVAAYLAPHRLGETKVA
EECCCCCCCHHHHCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHH
FESTIVEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWRKC
HHHHEEECCCEEEEEECCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
ENAGLPSAFRIAPTGQFRMTRMPLINGAESYTMSGQSAVLKPLSPQVNASGIGTLLLFHY
HCCCCCCEEEECCCCCEEEEECCCCCCCCCEEECCCHHEECCCCCCCCCCCCEEEEEEEC
PTTWNHILGDHAITFRVLPLGPELTEVTTKWLVNKEAVEGVDYTIEDLTHVWTETNDQDR
CCCHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCHHH
QIVEENAFGIRSPAYEPGPYSAEHEGGVMQFVEWYSSFMLDRLQGGATHLSRVA
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MEIQTEMLRKLKTRREGYSLDRAFYVDPGYYRQDLEQIWYRDWLFIGHDCEIPRPGNYFT
CCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEEE
VQVGEYPVVLVRDRQGAIRALHNSCRHRGSRVCTQHRGSSAKLVCPYHQWTYELDGRLLF
EEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCEEEE
ARQMPEGFDPAEHSLKAIHCETVGGYIFISLADEPVDFRQFRETVAAYLAPHRLGETKVA
EECCCCCCCHHHHCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHH
FESTIVEKGNWKLVWENNRECYHCAANHPELCRTYPEAPTVTGVQGAMDDPEIGAHWRKC
HHHHEEECCCEEEEEECCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
ENAGLPSAFRIAPTGQFRMTRMPLINGAESYTMSGQSAVLKPLSPQVNASGIGTLLLFHY
HCCCCCCEEEECCCCCEEEEECCCCCCCCCEEECCCHHEECCCCCCCCCCCCEEEEEEEC
PTTWNHILGDHAITFRVLPLGPELTEVTTKWLVNKEAVEGVDYTIEDLTHVWTETNDQDR
CCCHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCHHH
QIVEENAFGIRSPAYEPGPYSAEHEGGVMQFVEWYSSFMLDRLQGGATHLSRVA
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8048958 [H]