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The map label for this gene is yciQ [H]

Identifier: 150395690

GI number: 150395690

Start: 501166

End: 503100

Strand: Direct

Name: yciQ [H]

Synonym: Smed_0465

Alternate gene names: 150395690

Gene position: 501166-503100 (Clockwise)

Preceding gene: 150395689

Following gene: 150395691

Centisome position: 13.25

GC content: 62.48

Gene sequence:

>1935_bases
ATGAGGCGGCTTTTAGCGGCGCTTGCGCTCGTCTTTTTCGTTCTTGCAATGCCGCTAGACGCGGCGGCGGAAGAGTTTAT
CTCCGCCTACCATTCGGTGATCGGCGTCGCAAAGGACGGCACGCTGACGGTAACCGAGACGATTACGGCCAATGTGGAGG
GAAACCAGATAAGGCGCGGCATCTACCGCGACTTTCCGTTGACCTTCGTCGATGAGCGCGACCGCCGCAGCAAGGTCGAC
TTCAAACTCCTCTCCGTCGAGCGGGATGGCGATGATGAGGATTACCGGACCGAATCGATCAACGGCGGCATCCGCATCTA
CACCGGGAACGCCGACGTTCTGCTGCCGCATGGCGAGCACACCTTCCAGATCACCTATGAGACGAGCCGGCAGATACGCT
TCTTCGATGATCACGACGAACTCTACTGGAATGTGACGGGAACCGAATGGGCATTTCCGATCGAGGAGGCCACGGCCACC
GTGACACTGCCTGATGGAGTGAAGGCGAAGGCGCTCGACGTCTTTACCGGCGGCTACGGGGCGACGGAAAAAGATGCGCG
GGCGGTGGAGGAGGGTGACGAAATCTTCTTCGCGACGACGCGCCGGCTGCGCCCGCAGGAAGGATTGACCGTCGCGATCA
AGCTGCCCAAGGGCAGCATCGAGCGCCCCACTCCTTCGCAGGAAAATATCTGGTGGCTGCGCGACCACGCGGCCCTGGTC
ATCGCCGGAGCCGGCCTCCTCTTCGTGACGCTTTATTACGGGCGCGCCTGGATTCGTGTCGGCCGCGACCCGACGCGCGG
GGTCATGGTCCCGCGCTGGGATCCTCCGGAGGGTGTCTCGCCCGCGCTGGTCAACTACATCGACAACAAGGGTTTTTCCG
GCGGGGGATGGACGGCTCTCTCAGCTGCGGCGCTCAACCTTGCGGTGCGGGGACATGTTGTCCTGGAAGACCTGAAGAAT
GCGATCATCATCACCGCCACGGGCAAGACCGGTGAAAAGCTGCCGACCGGCGAAGCGGCCTTGATGAGGGCGGTCGAAGC
CGCTGACGGCAAGCTCACCATCGACCGCGAGAATGGGAAGAGGATTCAGGCCGCCGGTTCCGGCTTTCGCAGCGCGATGG
AGCGCGAGCATCGTGGAAAGTATTACCGCGCCAATAAGAGCTACGTCGTCGTCGGCATCGTTCTTTCGGCCGCCACCCTC
GCGGCGCTGCTCATCTTCGGCGGCTTGAGCGAGGACAGCATTCCTTTCGTGATCGTCCCGGTTTTTCTCGCCGTCTTTAT
TGCCGCCTTCGCCGTGTCGGTCGGCAAATCGTTCCGGCGCAGCTCGAGCCTCAGACGCCGAATCCTTTCGATCGTGGTCC
TGGCTTTCATGGGCTTCGTGCTCTTCACCGAATTTTCGAGCATTCTCGCCGCGCTCGTCTTTTCAGCCAGCGACCCAGCC
GACCTGCCGTTGTTCTTCGCAATCGGCGGCATCGTCCTCGTGAACGGGCTGTTCTATTTTCTCATGGGCGCGCCCACACC
GCTGGGTACGCGCATGATGGATGGTATCGACGGTCTCAGGCAATACCTGACGCTCGCCGAAAAGGACCGGCTGAACATGC
AAAGCGCGCCGGAAATGTCGCCCCGGCATTTCGAAACCCTGCTTCCTTATGCAGTGGCTCTCGGAGTGGAGAAGCCCTGG
AGCGAGACCTTCGAGCGCTGGCTGCTTGCAGCTTCCGCCGGCGCGGCTGCGGCCGCCTACCAGCCGAGCTGGTATCATGG
CGATTCCTTCGGCCCCGGATCCTTCACCGACACGATCGGCGGTTTGGCCGGTTCGATGACGGATAAGATCACGTCTTCCT
TGCCGCCGCCGGCCAGGAGTTCGTCCTCCGGCTTTTCCTCCGGCGGCGGGTTTTCCGGCGGCGGCGGAGGAGGTGGCGGC
GGCGGCGGCTGGTGA

Upstream 100 bases:

>100_bases
GGATCGATAAAACGATCTATCTCTTTGAACCACGCACTTCCGGGCGGTAATCCGTATGCTTTCCTGGAATGCTCCAGCGG
GCCTGAAAAGGGAACTCCCG

Downstream 100 bases:

>100_bases
CAGTCGATTTCCTCGCTCGGCTTAATGACATTTCGGCCAGAGCTTGCTAAGGCATGGCGCCCAAAACAGCGCAGCGGTTT
CGGGACAATGACATGCCAAA

Product: putative transmembrane signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MRRLLAALALVFFVLAMPLDAAAEEFISAYHSVIGVAKDGTLTVTETITANVEGNQIRRGIYRDFPLTFVDERDRRSKVD
FKLLSVERDGDDEDYRTESINGGIRIYTGNADVLLPHGEHTFQITYETSRQIRFFDDHDELYWNVTGTEWAFPIEEATAT
VTLPDGVKAKALDVFTGGYGATEKDARAVEEGDEIFFATTRRLRPQEGLTVAIKLPKGSIERPTPSQENIWWLRDHAALV
IAGAGLLFVTLYYGRAWIRVGRDPTRGVMVPRWDPPEGVSPALVNYIDNKGFSGGGWTALSAAALNLAVRGHVVLEDLKN
AIIITATGKTGEKLPTGEAALMRAVEAADGKLTIDRENGKRIQAAGSGFRSAMEREHRGKYYRANKSYVVVGIVLSAATL
AALLIFGGLSEDSIPFVIVPVFLAVFIAAFAVSVGKSFRRSSSLRRRILSIVVLAFMGFVLFTEFSSILAALVFSASDPA
DLPLFFAIGGIVLVNGLFYFLMGAPTPLGTRMMDGIDGLRQYLTLAEKDRLNMQSAPEMSPRHFETLLPYAVALGVEKPW
SETFERWLLAASAGAAAAAYQPSWYHGDSFGPGSFTDTIGGLAGSMTDKITSSLPPPARSSSSGFSSGGGFSGGGGGGGG
GGGW

Sequences:

>Translated_644_residues
MRRLLAALALVFFVLAMPLDAAAEEFISAYHSVIGVAKDGTLTVTETITANVEGNQIRRGIYRDFPLTFVDERDRRSKVD
FKLLSVERDGDDEDYRTESINGGIRIYTGNADVLLPHGEHTFQITYETSRQIRFFDDHDELYWNVTGTEWAFPIEEATAT
VTLPDGVKAKALDVFTGGYGATEKDARAVEEGDEIFFATTRRLRPQEGLTVAIKLPKGSIERPTPSQENIWWLRDHAALV
IAGAGLLFVTLYYGRAWIRVGRDPTRGVMVPRWDPPEGVSPALVNYIDNKGFSGGGWTALSAAALNLAVRGHVVLEDLKN
AIIITATGKTGEKLPTGEAALMRAVEAADGKLTIDRENGKRIQAAGSGFRSAMEREHRGKYYRANKSYVVVGIVLSAATL
AALLIFGGLSEDSIPFVIVPVFLAVFIAAFAVSVGKSFRRSSSLRRRILSIVVLAFMGFVLFTEFSSILAALVFSASDPA
DLPLFFAIGGIVLVNGLFYFLMGAPTPLGTRMMDGIDGLRQYLTLAEKDRLNMQSAPEMSPRHFETLLPYAVALGVEKPW
SETFERWLLAASAGAAAAAYQPSWYHGDSFGPGSFTDTIGGLAGSMTDKITSSLPPPARSSSSGFSSGGGFSGGGGGGGG
GGGW
>Mature_644_residues
MRRLLAALALVFFVLAMPLDAAAEEFISAYHSVIGVAKDGTLTVTETITANVEGNQIRRGIYRDFPLTFVDERDRRSKVD
FKLLSVERDGDDEDYRTESINGGIRIYTGNADVLLPHGEHTFQITYETSRQIRFFDDHDELYWNVTGTEWAFPIEEATAT
VTLPDGVKAKALDVFTGGYGATEKDARAVEEGDEIFFATTRRLRPQEGLTVAIKLPKGSIERPTPSQENIWWLRDHAALV
IAGAGLLFVTLYYGRAWIRVGRDPTRGVMVPRWDPPEGVSPALVNYIDNKGFSGGGWTALSAAALNLAVRGHVVLEDLKN
AIIITATGKTGEKLPTGEAALMRAVEAADGKLTIDRENGKRIQAAGSGFRSAMEREHRGKYYRANKSYVVVGIVLSAATL
AALLIFGGLSEDSIPFVIVPVFLAVFIAAFAVSVGKSFRRSSSLRRRILSIVVLAFMGFVLFTEFSSILAALVFSASDPA
DLPLFFAIGGIVLVNGLFYFLMGAPTPLGTRMMDGIDGLRQYLTLAEKDRLNMQSAPEMSPRHFETLLPYAVALGVEKPW
SETFERWLLAASAGAAAAAYQPSWYHGDSFGPGSFTDTIGGLAGSMTDKITSSLPPPARSSSSGFSSGGGFSGGGGGGGG
GGGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787522, Length=408, Percent_Identity=25.9803921568627, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018702 [H]

Pfam domain/function: PF09972 DUF2207 [H]

EC number: NA

Molecular weight: Translated: 69475; Mature: 69475

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLAALALVFFVLAMPLDAAAEEFISAYHSVIGVAKDGTLTVTETITANVEGNQIRRG
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCHHHHHH
IYRDFPLTFVDERDRRSKVDFKLLSVERDGDDEDYRTESINGGIRIYTGNADVLLPHGEH
HHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCEEEEECCCCEEEECCCE
TFQITYETSRQIRFFDDHDELYWNVTGTEWAFPIEEATATVTLPDGVKAKALDVFTGGYG
EEEEEEECCCEEEEEECCCEEEEEECCCCEECCHHHCEEEEECCCCCCEEEEEEEECCCC
ATEKDARAVEEGDEIFFATTRRLRPQEGLTVAIKLPKGSIERPTPSQENIWWLRDHAALV
CCCHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEE
IAGAGLLFVTLYYGRAWIRVGRDPTRGVMVPRWDPPEGVSPALVNYIDNKGFSGGGWTAL
EECHHHHHHHHHHCCEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHH
SAAALNLAVRGHVVLEDLKNAIIITATGKTGEKLPTGEAALMRAVEAADGKLTIDRENGK
HHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCC
RIQAAGSGFRSAMEREHRGKYYRANKSYVVVGIVLSAATLAALLIFGGLSEDSIPFVIVP
EEEECCHHHHHHHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
VFLAVFIAAFAVSVGKSFRRSSSLRRRILSIVVLAFMGFVLFTEFSSILAALVFSASDPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DLPLFFAIGGIVLVNGLFYFLMGAPTPLGTRMMDGIDGLRQYLTLAEKDRLNMQSAPEMS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PRHFETLLPYAVALGVEKPWSETFERWLLAASAGAAAAAYQPSWYHGDSFGPGSFTDTIG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHH
GLAGSMTDKITSSLPPPARSSSSGFSSGGGFSGGGGGGGGGGGW
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLLAALALVFFVLAMPLDAAAEEFISAYHSVIGVAKDGTLTVTETITANVEGNQIRRG
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCHHHHHH
IYRDFPLTFVDERDRRSKVDFKLLSVERDGDDEDYRTESINGGIRIYTGNADVLLPHGEH
HHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCEEEEECCCCEEEECCCE
TFQITYETSRQIRFFDDHDELYWNVTGTEWAFPIEEATATVTLPDGVKAKALDVFTGGYG
EEEEEEECCCEEEEEECCCEEEEEECCCCEECCHHHCEEEEECCCCCCEEEEEEEECCCC
ATEKDARAVEEGDEIFFATTRRLRPQEGLTVAIKLPKGSIERPTPSQENIWWLRDHAALV
CCCHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEEE
IAGAGLLFVTLYYGRAWIRVGRDPTRGVMVPRWDPPEGVSPALVNYIDNKGFSGGGWTAL
EECHHHHHHHHHHCCEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHH
SAAALNLAVRGHVVLEDLKNAIIITATGKTGEKLPTGEAALMRAVEAADGKLTIDRENGK
HHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCC
RIQAAGSGFRSAMEREHRGKYYRANKSYVVVGIVLSAATLAALLIFGGLSEDSIPFVIVP
EEEECCHHHHHHHHHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
VFLAVFIAAFAVSVGKSFRRSSSLRRRILSIVVLAFMGFVLFTEFSSILAALVFSASDPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DLPLFFAIGGIVLVNGLFYFLMGAPTPLGTRMMDGIDGLRQYLTLAEKDRLNMQSAPEMS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PRHFETLLPYAVALGVEKPWSETFERWLLAASAGAAAAAYQPSWYHGDSFGPGSFTDTIG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHH
GLAGSMTDKITSSLPPPARSSSSGFSSGGGFSGGGGGGGGGGGW
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]