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The map label for this gene is ahyR [H]

Identifier: 150395665

GI number: 150395665

Start: 476654

End: 477394

Strand: Direct

Name: ahyR [H]

Synonym: Smed_0440

Alternate gene names: 150395665

Gene position: 476654-477394 (Clockwise)

Preceding gene: 150395664

Following gene: 150395666

Centisome position: 12.6

GC content: 60.32

Gene sequence:

>741_bases
ATGATCGATTTCAGCGTGGATGTATCCTCATTGGTCCTCCCCGATGGTCACGTTATCAGCGGGTCGATCGAGAATGAGGA
TGATGTCAGGGGCGCTCTCGGCCGGGTTTCTGAAGGCTTCGGGTTTCGCGGCTTCATGGTGCTCGCAATCCCCGATTCCG
GGTCCCACAGTCTTACAGCGCAGGCGCTGATGACGACTTGGCCCATGGATTTTCTCAGGCGCTATGACAGTGCCCGCCTG
ATCGACGGCAGTCCGGTAATCCAGCGGCTGCGGCGCAGCACCATTCCCTTTACATACGATGCGCATCAACTGGCGCGCGG
GCGTGTGGACGGAAAAGGCGAAGCTGCCATATGCGTTTTCGAACAGGCGAACATGCCACGTGGGGTCTATCTGCCCGTCC
ATGATGCCGCCGGTCACCGCGCCGCGGTTGCCTTCGGCGGTGACAGGTCCGCCGTTTCCGGCGATGAGTTGCAGGAATTG
AACCTTTGGGCAGGCCTCTTGTACAGTCGGCTGAGCGAAGTCAGAACGCGCGACCGGCGAGGTCCGGGCAGCCTTTCCAG
GCGCGAGATCGAGTGTTTGCGTTGGGCCGCGGCGGGCAAAACGACCGTGGAGATGGCGCGCATCATGGCGCTGTCGGAAT
ACACGGTGAATCACTATCTCAACCGCGCGACGCGCAAGCTGGATTCGGTCAATCGGGTCCAAACGGTCGCTAAGGCAATA
CGCGCGGGATTGATCAATTGA

Upstream 100 bases:

>100_bases
GGTTGTGCTGGGCTTGATTCTGGTGGAAGCCGTGGCGAGGGTGTGAAAGCGTGAGCGGTCATGCTCCAGCCGGAGCACGG
ATGTGGGAGGCGGGCGTAAG

Downstream 100 bases:

>100_bases
TCGGTGCCAACCGTGGCTGAATAGGCTTTTTGCCCTTGGCGCTAAGGCACGCACAGGAAGTAGGGCACGCGAAACCAAAT
GCGGCCATTTCCGGGGCGGT

Product: regulatory protein LuxR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MIDFSVDVSSLVLPDGHVISGSIENEDDVRGALGRVSEGFGFRGFMVLAIPDSGSHSLTAQALMTTWPMDFLRRYDSARL
IDGSPVIQRLRRSTIPFTYDAHQLARGRVDGKGEAAICVFEQANMPRGVYLPVHDAAGHRAAVAFGGDRSAVSGDELQEL
NLWAGLLYSRLSEVRTRDRRGPGSLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAI
RAGLIN

Sequences:

>Translated_246_residues
MIDFSVDVSSLVLPDGHVISGSIENEDDVRGALGRVSEGFGFRGFMVLAIPDSGSHSLTAQALMTTWPMDFLRRYDSARL
IDGSPVIQRLRRSTIPFTYDAHQLARGRVDGKGEAAICVFEQANMPRGVYLPVHDAAGHRAAVAFGGDRSAVSGDELQEL
NLWAGLLYSRLSEVRTRDRRGPGSLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAI
RAGLIN
>Mature_246_residues
MIDFSVDVSSLVLPDGHVISGSIENEDDVRGALGRVSEGFGFRGFMVLAIPDSGSHSLTAQALMTTWPMDFLRRYDSARL
IDGSPVIQRLRRSTIPFTYDAHQLARGRVDGKGEAAICVFEQANMPRGVYLPVHDAAGHRAAVAFGGDRSAVSGDELQEL
NLWAGLLYSRLSEVRTRDRRGPGSLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAI
RAGLIN

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 27046; Mature: 27046

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFSVDVSSLVLPDGHVISGSIENEDDVRGALGRVSEGFGFRGFMVLAIPDSGSHSLTA
CCCCCCCHHHEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHH
QALMTTWPMDFLRRYDSARLIDGSPVIQRLRRSTIPFTYDAHQLARGRVDGKGEAAICVF
HHHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHCCCCEECHHHHHCCCCCCCCCEEEEEE
EQANMPRGVYLPVHDAAGHRAAVAFGGDRSAVSGDELQELNLWAGLLYSRLSEVRTRDRR
ECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GPGSLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAI
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGLIN
HHCCCC
>Mature Secondary Structure
MIDFSVDVSSLVLPDGHVISGSIENEDDVRGALGRVSEGFGFRGFMVLAIPDSGSHSLTA
CCCCCCCHHHEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHH
QALMTTWPMDFLRRYDSARLIDGSPVIQRLRRSTIPFTYDAHQLARGRVDGKGEAAICVF
HHHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHCCCCEECHHHHHCCCCCCCCCEEEEEE
EQANMPRGVYLPVHDAAGHRAAVAFGGDRSAVSGDELQELNLWAGLLYSRLSEVRTRDRR
ECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GPGSLSRREIECLRWAAAGKTTVEMARIMALSEYTVNHYLNRATRKLDSVNRVQTVAKAI
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGLIN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]