| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yghX [H]
Identifier: 150395606
GI number: 150395606
Start: 408389
End: 409264
Strand: Direct
Name: yghX [H]
Synonym: Smed_0381
Alternate gene names: 150395606
Gene position: 408389-409264 (Clockwise)
Preceding gene: 150395605
Following gene: 150395608
Centisome position: 10.8
GC content: 61.53
Gene sequence:
>876_bases ATGAACAAACCTGTCATTACCCAGGCGATGATCGATGCCTATGACGAGTATACGCATCTCACCTTGGACCGCCGCCGCTT CATGGAGAAACTGACGGCGCTTGCCGGGACGGCTGCCGCCGCCGCTGCAATCGCGCCGATGCTGGCTGCCAACAGCGCCA AAGCCGAAATAATCGCCGAAACGGACGAGCGAATCAAAGGCGAGGACATCACCTATCCTGGCGGCGATGGCAAAATGAAG GGTTATCTCGTGAAGCCCGCCGAAATGTCCGGCAAGCTTCCCGCCGTCATCGTCATCCACGAGAATCGCGGCCTCAATCC GCACATCAGAGACGTTGCACGCCGCATGGCGCTCGAAGGTTTTCTGGCACTTGCTCCCGATTTCCTTTCGCCGGAGGGGG GAACCCCGGGCGATGAGGACAAGGCGCGCGAGATGATCGGCGCGCTCGATGCAAGCGCTACGAATGCCAACGCCGTCGCC ACAGTGGCCTTCCTGAAGGGTCATGCGGAAAGCACCGCCAATGTGGGGGCGATCGGCTTTTGCTGGGGCGGCGGTCTCGT CAACAGGCTTGCCGTGAACGCGCCTGACCTCAAGGCCGGCGTCGCCTATTACGGCGCCCAGCCGAAAGCCGAGGACGTGC CGAAGATCAAGGCTGCGCTGCTGCTGCATTATGCCGGGCTCGATGAGCGCATCAATGCCGGCATCGAGGCCTACCGCAAG GCGTTGACGGAAAACGGCAAGGACGCCACGATTCACGTCTATGAGGGCGTGAACCACGCTTTCAACAACGACACCTCGGC AGCCCGTTACGACAAGGAGGCGGCCGACCTTGCCTGGCAGCGGACCGTCGAATTCCTGAAGGCGAAGCTCGCTTAG
Upstream 100 bases:
>100_bases ATGGCGATGAGCTGAGGTAACGCAGTTTTGTAAGTCCGTGACCGCGCCGCTGACCTATTCTGTCCAGCGGCTTTCATCTG CCACAGCCCAGGAGAGCGTC
Downstream 100 bases:
>100_bases TCATACGGCCGGTTTGGGCGCAGATTTCACTGCGCCTCTATCGGCCGGGATAGCGCCCTGCGAGACCTCGCGGGCACAGG TCGATATGGCGTCTGCAAGC
Product: carboxymethylenebutenolidase
Products: 4-oxohex-2-enedioate
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNKPVITQAMIDAYDEYTHLTLDRRRFMEKLTALAGTAAAAAAIAPMLAANSAKAEIIAETDERIKGEDITYPGGDGKMK GYLVKPAEMSGKLPAVIVIHENRGLNPHIRDVARRMALEGFLALAPDFLSPEGGTPGDEDKAREMIGALDASATNANAVA TVAFLKGHAESTANVGAIGFCWGGGLVNRLAVNAPDLKAGVAYYGAQPKAEDVPKIKAALLLHYAGLDERINAGIEAYRK ALTENGKDATIHVYEGVNHAFNNDTSAARYDKEAADLAWQRTVEFLKAKLA
Sequences:
>Translated_291_residues MNKPVITQAMIDAYDEYTHLTLDRRRFMEKLTALAGTAAAAAAIAPMLAANSAKAEIIAETDERIKGEDITYPGGDGKMK GYLVKPAEMSGKLPAVIVIHENRGLNPHIRDVARRMALEGFLALAPDFLSPEGGTPGDEDKAREMIGALDASATNANAVA TVAFLKGHAESTANVGAIGFCWGGGLVNRLAVNAPDLKAGVAYYGAQPKAEDVPKIKAALLLHYAGLDERINAGIEAYRK ALTENGKDATIHVYEGVNHAFNNDTSAARYDKEAADLAWQRTVEFLKAKLA >Mature_291_residues MNKPVITQAMIDAYDEYTHLTLDRRRFMEKLTALAGTAAAAAAIAPMLAANSAKAEIIAETDERIKGEDITYPGGDGKMK GYLVKPAEMSGKLPAVIVIHENRGLNPHIRDVARRMALEGFLALAPDFLSPEGGTPGDEDKAREMIGALDASATNANAVA TVAFLKGHAESTANVGAIGFCWGGGLVNRLAVNAPDLKAGVAYYGAQPKAEDVPKIKAALLLHYAGLDERINAGIEAYRK ALTENGKDATIHVYEGVNHAFNNDTSAARYDKEAADLAWQRTVEFLKAKLA
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI20270371, Length=217, Percent_Identity=29.4930875576037, Blast_Score=75, Evalue=5e-14, Organism=Escherichia coli, GI48994982, Length=254, Percent_Identity=32.6771653543307, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: 3.1.1.45
Molecular weight: Translated: 31019; Mature: 31019
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPVITQAMIDAYDEYTHLTLDRRRFMEKLTALAGTAAAAAAIAPMLAANSAKAEIIAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC TDERIKGEDITYPGGDGKMKGYLVKPAEMSGKLPAVIVIHENRGLNPHIRDVARRMALEG CHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH FLALAPDFLSPEGGTPGDEDKAREMIGALDASATNANAVATVAFLKGHAESTANVGAIGF HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE CWGGGLVNRLAVNAPDLKAGVAYYGAQPKAEDVPKIKAALLLHYAGLDERINAGIEAYRK EECCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH ALTENGKDATIHVYEGVNHAFNNDTSAARYDKEAADLAWQRTVEFLKAKLA HHHCCCCCCEEEEECCCCHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKPVITQAMIDAYDEYTHLTLDRRRFMEKLTALAGTAAAAAAIAPMLAANSAKAEIIAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC TDERIKGEDITYPGGDGKMKGYLVKPAEMSGKLPAVIVIHENRGLNPHIRDVARRMALEG CHHHCCCCCCCCCCCCCCCCEEEECCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH FLALAPDFLSPEGGTPGDEDKAREMIGALDASATNANAVATVAFLKGHAESTANVGAIGF HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE CWGGGLVNRLAVNAPDLKAGVAYYGAQPKAEDVPKIKAALLLHYAGLDERINAGIEAYRK EECCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH ALTENGKDATIHVYEGVNHAFNNDTSAARYDKEAADLAWQRTVEFLKAKLA HHHCCCCCCEEEEECCCCHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O
Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4-oxohex-2-enedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]