Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150395588

Identifier: 150395588

GI number: 150395588

Start: 386374

End: 387873

Strand: Direct

Name: 150395588

Synonym: Smed_0363

Alternate gene names: NA

Gene position: 386374-387873 (Clockwise)

Preceding gene: 150395587

Following gene: 150395589

Centisome position: 10.22

GC content: 60.2

Gene sequence:

>1500_bases
ATGGATACATTTTCGTTTTTGATCGATGGGTTCGCACTGGCTATTCAGCCTGCGAACCTCATCTACGCCGCCATTGGCGT
TCTTATTGGAACGGCCGTCGGTGTTCTCCCAGGTATTGGCCCGGCACTGACGGTGGCACTTCTGCTTCCAGTTACCTTCA
AGCTGGATCCCGGCGGCTCGATCATCATGTTCGCCGGAATTTACTATGGCGGAATGTACGGTGGTTCGACCACGGCGATC
CTGCTCAACGCGCCTGGCGAAAGCGCATCGGTCGTCACCGCGCTCGAGGGCAACAAGATGGCACGAGCCGGACGCGGTGG
GCCGGCGCTCGCGACAGCAGCCATCGGTTCGTTCGTTGCCGCACTCGTTGCTACAGCCGGGCTGGCCGTTCTCGCACCGT
ATCTCGTGAAGATTGCTGTCAAGTTCGGTCCCTGGGATTATTTCGGTCTGATGCTGATCGCGTTCGTGACGGTATCGGCA
ACGTTCGGGTCATCGCCGCTGCGGGGGCTCACCAGTCTGGCCTTTGGCCTCTGGCTGGGACTGATGGGCATCGACCAGTT
GACGGGCCAGGCTCGCCTGACGTTCGGTGTTCCGGGACTGCTTGATGGCGTCGAGGTGACAACGCTCGCCGTCGGTCTGT
TCGCGATCGGTGAAGCCTTCTTCGTGGCGTCGCGTCATCTCTACAAGCCCGAGAAGCCTATCCCGGTTAAGGGGTCGATC
TGGATGACCAGAGAAGACTGGAAGCGGTCCTGGAAGCCATGGCTTCGCGGTACGGTCATCGGCTTTCCGATCGGCGCACT
TCCGGCTGGCGGCGCCGAGATTCCTACTTTCCTGAGCTATACGATCGAACGCAAGCTGAGCAGCAAGCCGGAAGAGTTCG
GCCGCGGGGCAATCGAAGGCGTCGCCGGTCCGGAAGCTGCGAACAATGCGTCCGCCGCCGGCACGCTGGTTCCGCTGCTG
ACGCTTGGATTACCGACGTCTGCCACGGCCGCCGTCATGCTCGCGGGCTTCCAGCAGTACAACATCCAGCCGGGTCCCTT
GCTGTTCACGCAGCATGCTGACCTCGTCTGGGGACTGGTCGCCAGCCTGTTTATCGCCAATGTCATGCTGCTTGTTCTCA
ACCTGCCTTTGGTCGGAATTTGGGTGAAGCTCCTCAAAATTCCGCTGCCCTGGCTCTATGCAGGCATCCTCGTGTTTGCT
TCGATGGGCACCCTTGCAGCGAACCCATCCGTGACGGAACTGCTGCTGCTGACGGGATTCGGCGTCGTCGGATTTGTGAT
GCGCCGCTACGACTATCCCATCGCTCCGGCGGTTGTCGGTCTGATCCTTGGCCCGCTTGCAGACAGCGCCTTGCGCCGCT
CTCTGCAAATGAGCCTTGGCGATCCGATGATCCTGGTCCAGCATCCGAGTTCGGCCATCATGATCGGCATAGCCGTTGTT
GCCTTGGTCGCTCCTTTTGTATTCAGAGGCCTCGCGAAATTCCGTCAAGACGAGGATTGA

Upstream 100 bases:

>100_bases
GGGGCGGTCATCGGGGTGTTTGTCTTCCTTCTCTTCAATAAGCTCCTGACGCTCGCGTTGCCGCAAGGCCCGCTTGAGCG
GCTCTTCTGAGGACGCCCTG

Downstream 100 bases:

>100_bases
TGGCGCAAATCTGTTTGACCGCGCCGGGCGGCGCACATCACTGTGGCAATTCCAACTGAAAGAACAGGACACACGGACAA
GGCATGGCCAGGAACAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGSIIMFAGIYYGGMYGGSTTAI
LLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVAALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSA
TFGSSPLRGLTSLAFGLWLGLMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI
WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEGVAGPEAANNASAAGTLVPLL
TLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLVASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFA
SMGTLAANPSVTELLLLTGFGVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV
ALVAPFVFRGLAKFRQDED

Sequences:

>Translated_499_residues
MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGSIIMFAGIYYGGMYGGSTTAI
LLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVAALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSA
TFGSSPLRGLTSLAFGLWLGLMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI
WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEGVAGPEAANNASAAGTLVPLL
TLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLVASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFA
SMGTLAANPSVTELLLLTGFGVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV
ALVAPFVFRGLAKFRQDED
>Mature_499_residues
MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGSIIMFAGIYYGGMYGGSTTAI
LLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVAALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSA
TFGSSPLRGLTSLAFGLWLGLMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI
WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEGVAGPEAANNASAAGTLVPLL
TLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLVASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFA
SMGTLAANPSVTELLLLTGFGVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV
ALVAPFVFRGLAKFRQDED

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 52137; Mature: 52137

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGS
CCHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCC
IIMFAGIYYGGMYGGSTTAILLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVA
EEEEEHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHH
ALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSATFGSSPLRGLTSLAFGLWLG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI
HHHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEG
EEEHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHCC
VAGPEAANNASAAGTLVPLLTLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLV
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
ASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFASMGTLAANPSVTELLLLTGF
HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
ALVAPFVFRGLAKFRQDED
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGS
CCHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCC
IIMFAGIYYGGMYGGSTTAILLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVA
EEEEEHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHH
ALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSATFGSSPLRGLTSLAFGLWLG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI
HHHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEG
EEEHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHCC
VAGPEAANNASAAGTLVPLLTLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLV
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
ASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFASMGTLAANPSVTELLLLTGF
HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
ALVAPFVFRGLAKFRQDED
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]