| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395587
Identifier: 150395587
GI number: 150395587
Start: 385890
End: 386363
Strand: Direct
Name: 150395587
Synonym: Smed_0362
Alternate gene names: NA
Gene position: 385890-386363 (Clockwise)
Preceding gene: 150395586
Following gene: 150395588
Centisome position: 10.2
GC content: 58.23
Gene sequence:
>474_bases ATGACCCAGAAAACTCTTCGCATTCCCAACCGTCCAACTGCGATGATCGCTGTCGTCCTGTTCGCCATCGCCTTCATCAC CTACTGGGATGCAAGCCATATGAAGGTGCGGGCAACCTACGGGATGAGCGCCAGCGCGGCGTCCTATTTCGTGGCGATCC TTTTTGTAGTTCTTGCCATCGGTCACCTGATCAGCGCCTTCAAGCCATCGGACATCGAAGTCGAGAGCGCAGACTGGATG GCCGTCGGCTGGATCGGTTTTGCTCTTGCAGGGTTGATCGGATCGATCTGGCTTGGTGGCGGTTTCATTCCAGGCTCGAC GCTTCTCTTCGCACTGACCGCGCGGGCGTTCGGCCGCAAGGCCCTTCTCGTCGATCTATGTCTCGGGGCGGTCATCGGGG TGTTTGTCTTCCTTCTCTTCAATAAGCTCCTGACGCTCGCGTTGCCGCAAGGCCCGCTTGAGCGGCTCTTCTGA
Upstream 100 bases:
>100_bases GAACGCGTGAAGACCATCCTGACGTCCATCGGTCTCGCAAACTAACCTGACGGAGCACGCGGAAGCCGGCAAGTGCCCTT CCGCGTGCGACGAGGACACC
Downstream 100 bases:
>100_bases GGACGCCCTGATGGATACATTTTCGTTTTTGATCGATGGGTTCGCACTGGCTATTCAGCCTGCGAACCTCATCTACGCCG CCATTGGCGTTCTTATTGGA
Product: putative tricarboxylic transport membrane protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTQKTLRIPNRPTAMIAVVLFAIAFITYWDASHMKVRATYGMSASAASYFVAILFVVLAIGHLISAFKPSDIEVESADWM AVGWIGFALAGLIGSIWLGGGFIPGSTLLFALTARAFGRKALLVDLCLGAVIGVFVFLLFNKLLTLALPQGPLERLF
Sequences:
>Translated_157_residues MTQKTLRIPNRPTAMIAVVLFAIAFITYWDASHMKVRATYGMSASAASYFVAILFVVLAIGHLISAFKPSDIEVESADWM AVGWIGFALAGLIGSIWLGGGFIPGSTLLFALTARAFGRKALLVDLCLGAVIGVFVFLLFNKLLTLALPQGPLERLF >Mature_156_residues TQKTLRIPNRPTAMIAVVLFAIAFITYWDASHMKVRATYGMSASAASYFVAILFVVLAIGHLISAFKPSDIEVESADWMA VGWIGFALAGLIGSIWLGGGFIPGSTLLFALTARAFGRKALLVDLCLGAVIGVFVFLLFNKLLTLALPQGPLERLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16910; Mature: 16779
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKTLRIPNRPTAMIAVVLFAIAFITYWDASHMKVRATYGMSASAASYFVAILFVVLAI CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH GHLISAFKPSDIEVESADWMAVGWIGFALAGLIGSIWLGGGFIPGSTLLFALTARAFGRK HHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCH ALLVDLCLGAVIGVFVFLLFNKLLTLALPQGPLERLF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure TQKTLRIPNRPTAMIAVVLFAIAFITYWDASHMKVRATYGMSASAASYFVAILFVVLAI CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH GHLISAFKPSDIEVESADWMAVGWIGFALAGLIGSIWLGGGFIPGSTLLFALTARAFGRK HHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCH ALLVDLCLGAVIGVFVFLLFNKLLTLALPQGPLERLF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA