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The map label for this gene is xyoA [H]

Identifier: 150395548

GI number: 150395548

Start: 350614

End: 351852

Strand: Direct

Name: xyoA [H]

Synonym: Smed_0322

Alternate gene names: 150395548

Gene position: 350614-351852 (Clockwise)

Preceding gene: 150395547

Following gene: 150395550

Centisome position: 9.27

GC content: 59.81

Gene sequence:

>1239_bases
ATGGCTTTCGAGAAAGGTGGAGTCTGGCGGAACTGGGTGGGCAATCAGTACTGCGTGTCGCAGTACAAGGCGGCGCCGGA
AACCGAGGCGGAGCTGGCCGAGCTGGTCGCAGAAGCGGACAAGCGCGATCTCGGCGTACGCGTCTCCGGTTCGGGGCACT
CCTTCACGCCGGTCGTCGGGACCAGTGGTCTCCTGTTGTCGCTCGAAAATCTCAGGGGCGTTCAGAACGTCGACAAGGAA
CGCAGGCAAATTACGGTCGCGGGCGGAACGCGCATCAATGAAGTCGGCAAGACTCTCAAGCAGCACGGCCTCTCGCTGAT
CAATCAGGGCGATATCGACAGCCAGGCGGTGGCCGGCGCATTCACCACCGGAACCCACGGCACCGGGATCAAGCTCGGGA
ACATGGCGTCTTCGATCGCCGGAATGCGGATCGTCAAGGCGAATGGGGAAATCCTCGACATCGACGGGAGCGACACGGAG
CTCCTTCACGCCGCCCAGGTTTCGGTGGGTACGCTCGGTGTCATCTCCTCGATGACCCTCAACGTCATGGACGCCTATAA
TTTGCACGAGCGGCTCTGGCGGGACGATTTCGAGACCTGCATGGAGCGCCATGACGAACTGGCGGAAAATCACAGGCATT
TCGGATTCTTCTGGTGCCCGACGCCGGAAAGCCGCCATCTCTACTGCCTGCCGGATACCGCGGCGGTCTCGTCGACCGAT
AAATTGGCCGATGTCTGCGAAATGAAGGTGATGGATATCACCGACGCGACACCGATGGAGAGCGCGTTCGAAAAGATCGC
CTACAGTTCGGAAGTCTATCCGATCGAATATGTGCCGAATTTCGTCGAACTCGAATATGCGGTTCCCCTAGAGCACGGCA
AGGCGGCGGTCCGTGCCGTTCGCGATCTCATGCTCAACAAGCATACGAACTGCATCTATCCCATCGAATATCGCTTCACC
GCCGGCGATCCGGCTTGGATGAGCCCGTTCCATCATCAGGACAGCATCACGCTCTCCGTCTCGGGCGGACCGGGAATCGA
TTATTGGGCGTTCCTGAGGGACGTCGACCAGATCCTGCGCGGCTACGACTCGCGACCGCATTGGGGAAAAATGCATTTCC
TCGATACCGAAGACGTGACGCACCTTTATCCGCGCGCTGGCGATTTCCGCGCGCTGCGGCGGGAACTGGACCCCAATGGC
CGGTTCCTGAATGAGCACCTGAAAATGCTGCTCGGCTGA

Upstream 100 bases:

>100_bases
GCCAAGGCCGCCCTTTATCTTGCGAGCGACGATGCTAGCTTCGTCAGCGGCGCCCATCTGTTCGTCGACAATTGTTTTAC
AGCGGTGTGAGGGGGAGAAA

Downstream 100 bases:

>100_bases
AGGACAGAGCGGCGTTCAGGGAATTTCAGGTGACGCTCACACGAAAATGGAGTGCTCTTCCGTCACCAATTCCTGCAGGA
ACGAAACGGCTGTGCGCACG

Product: FAD-linked oxidoreductase

Products: NA

Alternate protein names: Alditol oxidase [H]

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MAFEKGGVWRNWVGNQYCVSQYKAAPETEAELAELVAEADKRDLGVRVSGSGHSFTPVVGTSGLLLSLENLRGVQNVDKE
RRQITVAGGTRINEVGKTLKQHGLSLINQGDIDSQAVAGAFTTGTHGTGIKLGNMASSIAGMRIVKANGEILDIDGSDTE
LLHAAQVSVGTLGVISSMTLNVMDAYNLHERLWRDDFETCMERHDELAENHRHFGFFWCPTPESRHLYCLPDTAAVSSTD
KLADVCEMKVMDITDATPMESAFEKIAYSSEVYPIEYVPNFVELEYAVPLEHGKAAVRAVRDLMLNKHTNCIYPIEYRFT
AGDPAWMSPFHHQDSITLSVSGGPGIDYWAFLRDVDQILRGYDSRPHWGKMHFLDTEDVTHLYPRAGDFRALRRELDPNG
RFLNEHLKMLLG

Sequences:

>Translated_412_residues
MAFEKGGVWRNWVGNQYCVSQYKAAPETEAELAELVAEADKRDLGVRVSGSGHSFTPVVGTSGLLLSLENLRGVQNVDKE
RRQITVAGGTRINEVGKTLKQHGLSLINQGDIDSQAVAGAFTTGTHGTGIKLGNMASSIAGMRIVKANGEILDIDGSDTE
LLHAAQVSVGTLGVISSMTLNVMDAYNLHERLWRDDFETCMERHDELAENHRHFGFFWCPTPESRHLYCLPDTAAVSSTD
KLADVCEMKVMDITDATPMESAFEKIAYSSEVYPIEYVPNFVELEYAVPLEHGKAAVRAVRDLMLNKHTNCIYPIEYRFT
AGDPAWMSPFHHQDSITLSVSGGPGIDYWAFLRDVDQILRGYDSRPHWGKMHFLDTEDVTHLYPRAGDFRALRRELDPNG
RFLNEHLKMLLG
>Mature_411_residues
AFEKGGVWRNWVGNQYCVSQYKAAPETEAELAELVAEADKRDLGVRVSGSGHSFTPVVGTSGLLLSLENLRGVQNVDKER
RQITVAGGTRINEVGKTLKQHGLSLINQGDIDSQAVAGAFTTGTHGTGIKLGNMASSIAGMRIVKANGEILDIDGSDTEL
LHAAQVSVGTLGVISSMTLNVMDAYNLHERLWRDDFETCMERHDELAENHRHFGFFWCPTPESRHLYCLPDTAAVSSTDK
LADVCEMKVMDITDATPMESAFEKIAYSSEVYPIEYVPNFVELEYAVPLEHGKAAVRAVRDLMLNKHTNCIYPIEYRFTA
GDPAWMSPFHHQDSITLSVSGGPGIDYWAFLRDVDQILRGYDSRPHWGKMHFLDTEDVTHLYPRAGDFRALRRELDPNGR
FLNEHLKMLLG

Specific function: Catalyzes the oxidation of xylitol to xylose, also acts on D-sorbitol [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323553, Length=225, Percent_Identity=29.7777777777778, Blast_Score=103, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007173
- InterPro:   IPR016166
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF04030 ALO; PF01565 FAD_binding_4 [H]

EC number: =1.1.3.41 [H]

Molecular weight: Translated: 45862; Mature: 45731

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEKGGVWRNWVGNQYCVSQYKAAPETEAELAELVAEADKRDLGVRVSGSGHSFTPVVG
CCCCCCCCCHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCEECCCCC
TSGLLLSLENLRGVQNVDKERRQITVAGGTRINEVGKTLKQHGLSLINQGDIDSQAVAGA
CCCCEEEEHHHCCHHHHCHHHHEEEEECCCCHHHHHHHHHHHCHHHCCCCCCCCHHHCCE
FTTGTHGTGIKLGNMASSIAGMRIVKANGEILDIDGSDTELLHAAQVSVGTLGVISSMTL
EECCCCCCCEEECCHHHHHHCEEEEECCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHH
NVMDAYNLHERLWRDDFETCMERHDELAENHRHFGFFWCPTPESRHLYCLPDTAAVSSTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCHHCCCHH
KLADVCEMKVMDITDATPMESAFEKIAYSSEVYPIEYVPNFVELEYAVPLEHGKAAVRAV
HHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCEEHHHCCCEEEEEEECCCCCCHHHHHHH
RDLMLNKHTNCIYPIEYRFTAGDPAWMSPFHHQDSITLSVSGGPGIDYWAFLRDVDQILR
HHHHHCCCCCEEEEEEEEEECCCCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
GYDSRPHWGKMHFLDTEDVTHLYPRAGDFRALRRELDPNGRFLNEHLKMLLG
CCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AFEKGGVWRNWVGNQYCVSQYKAAPETEAELAELVAEADKRDLGVRVSGSGHSFTPVVG
CCCCCCCCHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCEECCCCC
TSGLLLSLENLRGVQNVDKERRQITVAGGTRINEVGKTLKQHGLSLINQGDIDSQAVAGA
CCCCEEEEHHHCCHHHHCHHHHEEEEECCCCHHHHHHHHHHHCHHHCCCCCCCCHHHCCE
FTTGTHGTGIKLGNMASSIAGMRIVKANGEILDIDGSDTELLHAAQVSVGTLGVISSMTL
EECCCCCCCEEECCHHHHHHCEEEEECCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHH
NVMDAYNLHERLWRDDFETCMERHDELAENHRHFGFFWCPTPESRHLYCLPDTAAVSSTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCHHCCCHH
KLADVCEMKVMDITDATPMESAFEKIAYSSEVYPIEYVPNFVELEYAVPLEHGKAAVRAV
HHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCEEHHHCCCEEEEEEECCCCCCHHHHHHH
RDLMLNKHTNCIYPIEYRFTAGDPAWMSPFHHQDSITLSVSGGPGIDYWAFLRDVDQILR
HHHHHCCCCCEEEEEEEEEECCCCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
GYDSRPHWGKMHFLDTEDVTHLYPRAGDFRALRRELDPNGRFLNEHLKMLLG
CCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]