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The map label for this gene is flaD [H]

Identifier: 150395494

GI number: 150395494

Start: 287475

End: 288662

Strand: Direct

Name: flaD [H]

Synonym: Smed_0267

Alternate gene names: 150395494

Gene position: 287475-288662 (Clockwise)

Preceding gene: 150395493

Following gene: 150395495

Centisome position: 7.6

GC content: 59.68

Gene sequence:

>1188_bases
ATGACCAGCATTCTCACCAATGTCGCAGCGATGGCTGCACTCCAGACCCTGCGCGGCATCGACTCCAATATGGAGGAAAC
GCAGGCTCGGGTGTCCTCGGGCCTTCGCGTCGGAACAGCTTCGGACAACGCTGCCTACTGGTCGATCGCCACTACGATGC
GTTCGGACAATATGGCGCTTTCCGCCGTTCAGGACGCGCTGGGCCTGGGCGCCGCAAAGGTCGACACAGCCTATGCCGGT
GTGGAGAATGCGGTCGAGGTCGTGAAGGAAATTCGTGCCAAACTCGTCGCTGCGACCGAAGACGGTGTCGACAAGGCCAA
GATTCAGGAAGAGATCGAACAGCTCAAGCAACAGCTGACGAGCATTGCAACGGCCGCTTCCTTCAGCGGCGAAAACTGGC
TCCAGGCTGACATCACCACGCCTGTTACGAAGAGCGTAGTGGGTTCCTTTGTCCGCGACTCCTCAGGCGTCGTGTCCGTA
AAGACGATCGACTATGTCCTCGACGGCAACTCAGTCCTCTTCGATACGGTGGGCAATACCGGCATTCTGGACAAGGTCTA
TGACGTGTCAGAGTCCAGCGTCACGCTTTCGATCAACACGGGCGGCGTTGTTTCCGAGCATACGGTCGCAGCCTATACCG
TTGACGACCTCATCGCCGGCGGCGCGGTATTCCAGAACAATTATGCGCTTGCGGGCGGCGTCAGCTATGTTCAGGTCGAA
GGCGCTTGGGTCAGAGCAGTGGCTTCCTCTACGGTTCCCGGACAGGAGGTTGCTGCGGTGACGACGGCCGCAGCTCCCAT
CACCGCCGATTCCTGGATCGTAGACACGACTGCTGGGCCGGCAGCAAGTGTACCTGCACCCGCATCGGTCGAGAATATCG
ACATCACCGACGCTACCCAGGCCGCAAACCTCGATGCCCTGATCAGGGGGGTCGACGAAGCGCTCGAGGATCTGATCAGC
GCCACATCGGCTCTCGGATCGATCTCCATGCGCATCGGCATGCAGGAAGAGTTCGTATCGAAGCTCACCGACTCGATCGA
CTCGGGCATCGGCCGCCTCGTAGACGCCGACATGAACGAGGAATCGACCAGGCTCAAGGCGCTGCAGACGCAGCAGCAGC
TCGCCATCCAGTCGCTGTCGATCGCCAACACCAATTCGGAAAACATCCTCCAGCTCTTCCGTCAGTAA

Upstream 100 bases:

>100_bases
AACCAAGACGAAGAAGCGGTTAACGGCATGAGGCCTCGCGTTCGCTTCCCCGTGACAGACGGGATGTCCCTTTCCAACTA
GCCATTCAAAGGGGCCCTTA

Downstream 100 bases:

>100_bases
GCGGCGCCCCGGCTAGGGGGCGACTTCGTCCCGCCCTGAAGGAGAAAACTCCGCGGTCTCGCAAGGGGCCGCGGATTTTC
GTGCTGGCGCGGGGCTTGCG

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALSAVQDALGLGAAKVDTAYAG
VENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLTSIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSV
KTIDYVLDGNSVLFDTVGNTGILDKVYDVSESSVTLSINTGGVVSEHTVAAYTVDDLIAGGAVFQNNYALAGGVSYVQVE
GAWVRAVASSTVPGQEVAAVTTAAAPITADSWIVDTTAGPAASVPAPASVENIDITDATQAANLDALIRGVDEALEDLIS
ATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQLFRQ

Sequences:

>Translated_395_residues
MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALSAVQDALGLGAAKVDTAYAG
VENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLTSIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSV
KTIDYVLDGNSVLFDTVGNTGILDKVYDVSESSVTLSINTGGVVSEHTVAAYTVDDLIAGGAVFQNNYALAGGVSYVQVE
GAWVRAVASSTVPGQEVAAVTTAAAPITADSWIVDTTAGPAASVPAPASVENIDITDATQAANLDALIRGVDEALEDLIS
ATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQLFRQ
>Mature_394_residues
TSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALSAVQDALGLGAAKVDTAYAGV
ENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLTSIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVK
TIDYVLDGNSVLFDTVGNTGILDKVYDVSESSVTLSINTGGVVSEHTVAAYTVDDLIAGGAVFQNNYALAGGVSYVQVEG
AWVRAVASSTVPGQEVAAVTTAAAPITADSWIVDTTAGPAASVPAPASVENIDITDATQAANLDALIRGVDEALEDLISA
TSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQLFRQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 41133; Mature: 41002

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMAL
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCHHH
SAVQDALGLGAAKVDTAYAGVENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGNT
HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEEEEECCCCC
GILDKVYDVSESSVTLSINTGGVVSEHTVAAYTVDDLIAGGAVFQNNYALAGGVSYVQVE
CCHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHCCCEEEECCEEEECCCEEEEEC
GAWVRAVASSTVPGQEVAAVTTAAAPITADSWIVDTTAGPAASVPAPASVENIDITDATQ
CHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ESTRLKALQTQQQLAIQSLSIANTNSENILQLFRQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMAL
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCHHH
SAVQDALGLGAAKVDTAYAGVENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
SIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGNT
HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEEEEECCCCC
GILDKVYDVSESSVTLSINTGGVVSEHTVAAYTVDDLIAGGAVFQNNYALAGGVSYVQVE
CCHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHCCCEEEECCEEEECCCEEEEEC
GAWVRAVASSTVPGQEVAAVTTAAAPITADSWIVDTTAGPAASVPAPASVENIDITDATQ
CHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
AANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNE
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ESTRLKALQTQQQLAIQSLSIANTNSENILQLFRQ
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA