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The map label for this gene is flaC [H]

Identifier: 150395495

GI number: 150395495

Start: 288963

End: 289928

Strand: Direct

Name: flaC [H]

Synonym: Smed_0268

Alternate gene names: 150395495

Gene position: 288963-289928 (Clockwise)

Preceding gene: 150395494

Following gene: 150395496

Centisome position: 7.64

GC content: 61.8

Gene sequence:

>966_bases
ATGACCAGCATCATGACCAACCCCGCCGCCATGGCGGCGTTGCAGACGTTGCGCGCGATCAATCACAATCTGGAGACCAC
GCAGGGCCGCATCTCGTCCGGTTATCGGGTGGAGACGGCGGCCGACAACGCCGCCTACTGGTCGATCGCAACGACGATGC
GATCGGACAATGCCGCGCTGTCGACGGTCCACGACGCCTTGGGCCTCGGCGCTGCCAAAGTCGACACGTTCTACTCGGCC
ATGGATACGGTCATCGACGTGATGACGGAGATCAAGGCGAAGCTCGTCGCGGCAAGTGAGCCGGGCGTGGACAAGGACAA
GATCAACAAGGAAGTTGCCGAACTCAAGAGCCAGCTGAAGTCGGCCGCGCAATCTGCCTCCTTTTCCGGCGAAAACTGGC
TTTATAACGGCGCCGCGGCAGCACTTGGCACCAAATCGATCGTTGCCTCCTTCAACCGTAGCGCCGACGGCAGCGTTGCG
GTCTCGACGCTCAATTATGACACCGCCAAATCCGTCCTGATCGACGTTGCCGACCCCGCGCGCGGCATGCTCACCAAGGC
CGTCGATGCGGATGCCCTCCAGTCAACTCCGGCGGGCACGGCGCGCAATTATTATCTCATCGATGCCGGCGCCGCCCCGG
CAGGCGCGACCGAGATAGAGATCGACAGCGCAACGACCGGTGCTCAGCTCGGCGACATGATCAGCGTCGTCGACGAGCTC
ATCAGCCAGCTGACCGACTCCGCCGCCACGCTGGGGGCGATCACCAGCCGCATCGAAATGCAGGAAAGCTTCGTCGCCAA
TCTTATGGACGTGATCGACAAGGGCGTAGGCCGCCTCGTCGATGCCGACATGAACGAGGAATCGACGCGGCTGAAGGCTC
TGCAGACGCAGCAGCAGCTCGGCATTCAATCGCTGTCGATCGCAAACACCACCTCGGAAAACATTCTCCGCCTGTTCCAG
GAGTAA

Upstream 100 bases:

>100_bases
CGGCTGTCACCCAGGGCAAAAAGGTGTCAGCGTGCATGATGCCCCACCGTCGTTGCCGGCATTCCGGAATGGTACGATTC
TCCCAGCCAGGTGACCACCA

Downstream 100 bases:

>100_bases
GGTCATCGCTTTCCGCCGTGCCGCCGGTCATCGGCATCGGGTGGAAAAAGGTTGGACCGCGCTGTTGCCCTGGCGCGGTC
CAACACCTTCGCACAAGTTT

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALSTVHDALGLGAAKVDTFYSA
MDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLKSAAQSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVA
VSTLNYDTAKSVLIDVADPARGMLTKAVDADALQSTPAGTARNYYLIDAGAAPAGATEIEIDSATTGAQLGDMISVVDEL
ISQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLGIQSLSIANTTSENILRLFQ
E

Sequences:

>Translated_321_residues
MTSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALSTVHDALGLGAAKVDTFYSA
MDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLKSAAQSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVA
VSTLNYDTAKSVLIDVADPARGMLTKAVDADALQSTPAGTARNYYLIDAGAAPAGATEIEIDSATTGAQLGDMISVVDEL
ISQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLGIQSLSIANTTSENILRLFQ
E
>Mature_320_residues
TSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAALSTVHDALGLGAAKVDTFYSAM
DTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLKSAAQSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVAV
STLNYDTAKSVLIDVADPARGMLTKAVDADALQSTPAGTARNYYLIDAGAAPAGATEIEIDSATTGAQLGDMISVVDELI
SQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLGIQSLSIANTTSENILRLFQE

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 33712; Mature: 33581

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAAL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHCCCCHHH
STVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
SAAQSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVAVSTLNYDTAKSVLIDVADPA
HHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHEEECCCCH
RGMLTKAVDADALQSTPAGTARNYYLIDAGAAPAGATEIEIDSATTGAQLGDMISVVDEL
HHHHHHHHCHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
ISQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GIQSLSIANTTSENILRLFQE
CCHHEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
TSIMTNPAAMAALQTLRAINHNLETTQGRISSGYRVETAADNAAYWSIATTMRSDNAAL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHCCCCHHH
STVHDALGLGAAKVDTFYSAMDTVIDVMTEIKAKLVAASEPGVDKDKINKEVAELKSQLK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
SAAQSASFSGENWLYNGAAAALGTKSIVASFNRSADGSVAVSTLNYDTAKSVLIDVADPA
HHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHEEECCCCH
RGMLTKAVDADALQSTPAGTARNYYLIDAGAAPAGATEIEIDSATTGAQLGDMISVVDEL
HHHHHHHHCHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
ISQLTDSAATLGAITSRIEMQESFVANLMDVIDKGVGRLVDADMNEESTRLKALQTQQQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GIQSLSIANTTSENILRLFQE
CCHHEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335288; 11481430 [H]