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The map label for this gene is 150395431

Identifier: 150395431

GI number: 150395431

Start: 231848

End: 232351

Strand: Direct

Name: 150395431

Synonym: Smed_0204

Alternate gene names: NA

Gene position: 231848-232351 (Clockwise)

Preceding gene: 150395430

Following gene: 150395432

Centisome position: 6.13

GC content: 54.76

Gene sequence:

>504_bases
GTGAATTTCTTCAAATGCGTGTTGGCGCTTTCGGGCGCTTTCCTTCTTCTGAGCGGAGCGGCACAGGCTCGTGACTGGGG
CACCGAGACCAAGGAGGATGTATTCACCGGCAAGCAGACTGCCGTCATGATCGCTGGTCTCTCCAAGCCGATGTCGCTGT
ATTTCAGCTGCGATGCCGATCACCAGGTACGGCTTGCCGTTATCTTCAAGGTCAACGAGGTCGCGGAAGATGTACCCGCC
ACACTGGTGATGAAGGTCGACAATGGGGAGGCGGTCAAGTTTGACGTGACTTCCTACCAGCACAACGACGAGTATGGCGG
CTTTCATACTGTATCCGGCAACATTCTGGTCGCTGATTTGGTCAAGTCTGTCGGGCAGGCGAAGAGCCGGCTGCTCGTCG
GTCTTGATATCCCTTTGACGGGCGTTAAGGACTCTGACGAATTCTCAATTCGCGGTTCCACTGCAGCTGCGAACGAATTC
ATCAAGGCCTGCGAAATAAAGTAG

Upstream 100 bases:

>100_bases
GGCAGAGCGGTCATAAAAACCGACTCCTATGCCGATCTGTATTGACTGGTGAACGCATGAGTTGCAATCTCGCTGTTGTT
GGTAGCGATGAGGGTAAATC

Downstream 100 bases:

>100_bases
CTATCGATCTGCCTTCTGCAGCGGTGTTGGCGGCAGATCACCTGCACGGGCCGCGACAGCTTCGTGATCGTCGCAGACTG
CAGCCGGCGCGAATTGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNFFKCVLALSGAFLLLSGAAQARDWGTETKEDVFTGKQTAVMIAGLSKPMSLYFSCDADHQVRLAVIFKVNEVAEDVPA
TLVMKVDNGEAVKFDVTSYQHNDEYGGFHTVSGNILVADLVKSVGQAKSRLLVGLDIPLTGVKDSDEFSIRGSTAAANEF
IKACEIK

Sequences:

>Translated_167_residues
MNFFKCVLALSGAFLLLSGAAQARDWGTETKEDVFTGKQTAVMIAGLSKPMSLYFSCDADHQVRLAVIFKVNEVAEDVPA
TLVMKVDNGEAVKFDVTSYQHNDEYGGFHTVSGNILVADLVKSVGQAKSRLLVGLDIPLTGVKDSDEFSIRGSTAAANEF
IKACEIK
>Mature_167_residues
MNFFKCVLALSGAFLLLSGAAQARDWGTETKEDVFTGKQTAVMIAGLSKPMSLYFSCDADHQVRLAVIFKVNEVAEDVPA
TLVMKVDNGEAVKFDVTSYQHNDEYGGFHTVSGNILVADLVKSVGQAKSRLLVGLDIPLTGVKDSDEFSIRGSTAAANEF
IKACEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17984; Mature: 17984

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFKCVLALSGAFLLLSGAAQARDWGTETKEDVFTGKQTAVMIAGLSKPMSLYFSCDAD
CCHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCEEEEEEECCC
HQVRLAVIFKVNEVAEDVPATLVMKVDNGEAVKFDVTSYQHNDEYGGFHTVSGNILVADL
CCEEEEEEEEEHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCEEHHHH
VKSVGQAKSRLLVGLDIPLTGVKDSDEFSIRGSTAAANEFIKACEIK
HHHHHHHHHEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFFKCVLALSGAFLLLSGAAQARDWGTETKEDVFTGKQTAVMIAGLSKPMSLYFSCDAD
CCHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCEEEEEEECCC
HQVRLAVIFKVNEVAEDVPATLVMKVDNGEAVKFDVTSYQHNDEYGGFHTVSGNILVADL
CCEEEEEEEEEHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCEEHHHH
VKSVGQAKSRLLVGLDIPLTGVKDSDEFSIRGSTAAANEFIKACEIK
HHHHHHHHHEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA