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The map label for this gene is yjeB [C]

Identifier: 150395418

GI number: 150395418

Start: 210331

End: 210792

Strand: Direct

Name: yjeB [C]

Synonym: Smed_0191

Alternate gene names: 150395418

Gene position: 210331-210792 (Clockwise)

Preceding gene: 150395417

Following gene: 150395419

Centisome position: 5.56

GC content: 61.47

Gene sequence:

>462_bases
ATGCTGACGAAGAAGGGGAAATACGGATTGAAGGCGCTGGTCGATCTGGCACGGCTCGCGCCCGGGGAGACGGCCTTCAT
CACGGAAATCGCGCAGCGCAACAACATTCCGAAGAAGTTCCTCGACACAATTCTCCTGGAACTGCGCAATGCCGGCGTGC
TGCGGTCGAAGAAAGGGCCGGGCGGCGGTTATTCCCTGTCGAGACCGGCCTCCGAGATTCGCATCGGCCACGTCATACGG
ACGCTGGACGGCCCGCTGGCGCCGATACGCTGCGCCAGCCGCACGGCTTATGAAATCTGCGAAGACTGCAGCGATCCGGA
AACCTGCCGTGTCCGCATCTCGATGACGTCGGTTCGCGATGCCATGTCGTCCATCCTCGATTCGATGACCCTCTCTGAAT
TCGCCGCAGGCGGTGTTCTCGCTCCGGAAGCTGCAGTGGAAAAGCAGGCGCGCCGATCATGA

Upstream 100 bases:

>100_bases
GTATAGCTGAGTGTCGGTCAAGCATTCTTGTGCTATGGCAGGGCGAATTGTATCCGAGGCGGTTCCGGCGTCTCTGCCGG
ACCGGGGAGTAGCGGCTCGA

Downstream 100 bases:

>100_bases
CGGTGCGAAAAGTCGCCGGTTCGTCATAAAAGGCCGCCGAAAGGCTTGGTTTGTCGAAAGAAAGAGCCTATCTGGCGTCT
ATCTTTGCTGCGGTCCGCTG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MLTKKGKYGLKALVDLARLAPGETAFITEIAQRNNIPKKFLDTILLELRNAGVLRSKKGPGGGYSLSRPASEIRIGHVIR
TLDGPLAPIRCASRTAYEICEDCSDPETCRVRISMTSVRDAMSSILDSMTLSEFAAGGVLAPEAAVEKQARRS

Sequences:

>Translated_153_residues
MLTKKGKYGLKALVDLARLAPGETAFITEIAQRNNIPKKFLDTILLELRNAGVLRSKKGPGGGYSLSRPASEIRIGHVIR
TLDGPLAPIRCASRTAYEICEDCSDPETCRVRISMTSVRDAMSSILDSMTLSEFAAGGVLAPEAAVEKQARRS
>Mature_153_residues
MLTKKGKYGLKALVDLARLAPGETAFITEIAQRNNIPKKFLDTILLELRNAGVLRSKKGPGGGYSLSRPASEIRIGHVIR
TLDGPLAPIRCASRTAYEICEDCSDPETCRVRISMTSVRDAMSSILDSMTLSEFAAGGVLAPEAAVEKQARRS

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=134, Percent_Identity=31.3432835820896, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1788880, Length=133, Percent_Identity=29.3233082706767, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16520; Mature: 16520

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKKGKYGLKALVDLARLAPGETAFITEIAQRNNIPKKFLDTILLELRNAGVLRSKKGP
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
GGGYSLSRPASEIRIGHVIRTLDGPLAPIRCASRTAYEICEDCSDPETCRVRISMTSVRD
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
AMSSILDSMTLSEFAAGGVLAPEAAVEKQARRS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLTKKGKYGLKALVDLARLAPGETAFITEIAQRNNIPKKFLDTILLELRNAGVLRSKKGP
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
GGGYSLSRPASEIRIGHVIRTLDGPLAPIRCASRTAYEICEDCSDPETCRVRISMTSVRD
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHH
AMSSILDSMTLSEFAAGGVLAPEAAVEKQARRS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]