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The map label for this gene is yrbH [C]

Identifier: 150395419

GI number: 150395419

Start: 210924

End: 211928

Strand: Direct

Name: yrbH [C]

Synonym: Smed_0192

Alternate gene names: 150395419

Gene position: 210924-211928 (Clockwise)

Preceding gene: 150395418

Following gene: 150395425

Centisome position: 5.58

GC content: 64.68

Gene sequence:

>1005_bases
ATGGGCTTGAGACACGCGAAGGCGGACGCCGGTGGCACCGTGCTGGAGTCGATCGGCAGGACGTTGGCGACGGCGACGAA
CGGCATCAGGGCGCTTGCCGACCATCTGTCGAGCGACAAAACCTTCGCGGACGCCCTTGTCAATGCGGTCGAACTGATGG
GTGACGGAGATGGCCGCGTCGTCGTTTCGGGTGTCGGCAAGAGCGGTCACATCGGCCGCAAGATCGCAGCCACGCTCGCA
TCCACCGGCACCTCGGCCTATTTCGTCCATCCGACCGAGGCGAGCCATGGCGACCTCGGCATGATCACCGCTCAGGATGC
ATTGGTCCTGCTTTCCTGGTCGGGCGAGACGGCGGAACTCGCCAACATGCTGACCTATGCCAAGCGTTTCAAGGTGCCGA
TCATCTCGATCTCCTCCAACCGCGAAAGCACGCTGGCGCGCAATTCCGAAGTCGCACTCGTCTTGCCGAAGGTGCCGGAG
GCCTGTCCGCACGGCCTGGCGCCGACGACCTCCGCAATGCTTCAGCTCGCCATCGGCGATGCGCTCGCAATCGCGCTGCT
GGAGCGGCGCGGCTTCTCTGCCGAGGATTTCAAGACCTTCCATCCGGGCGGCAAGCTGGGCGCGCAGCTGCGCCTCGTCC
ATGAGCTGGCGCATGGCGCCGGGCAGCTGCCGTTGCTCCCTGTCGGCCGTCCGATGAGCGAGGCGGTCATCGAGATGTCT
GCCAAGGGCTTCGGCGTGGTCGGCATCGTCGATGAAAGCGGCAAGCTGATCGGCGTCATCACCGATGGCGACCTGCGCCG
CCATATGGCCGGAGATCTGCTGGCACAACCGGTCGAGGACATAATGTCGCACAAGCCGCGTGTCGTCAGCCGTGACGTGC
TTGCCAGTGCGGCCATGGAGTTCATGGAAGAACACAAGATCACCGTGCTCTTCCTCGTCGGCGATGCGGGCGCACCGGTC
GGCATCCTGCATATTCACGATCTGCTGCGCGCCGGCGTCGCCTGA

Upstream 100 bases:

>100_bases
GGCCGCCGAAAGGCTTGGTTTGTCGAAAGAAAGAGCCTATCTGGCGTCTATCTTTGCTGCGGTCCGCTGAAGAGACCGCA
TTCTCGCTAAGGGGTCGATG

Downstream 100 bases:

>100_bases
TCCTTCATCTTCACCGGCTTTTGCCGGGGCGGGGGATCGACGAAGGCACCGGGCTCATTGACATCGTTGCGATGCAGGCG
CTCGGCGATCGCCTTGGCGC

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGLRHAKADAGGTVLESIGRTLATATNGIRALADHLSSDKTFADALVNAVELMGDGDGRVVVSGVGKSGHIGRKIAATLA
STGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIISISSNRESTLARNSEVALVLPKVPE
ACPHGLAPTTSAMLQLAIGDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHGAGQLPLLPVGRPMSEAVIEMS
AKGFGVVGIVDESGKLIGVITDGDLRRHMAGDLLAQPVEDIMSHKPRVVSRDVLASAAMEFMEEHKITVLFLVGDAGAPV
GILHIHDLLRAGVA

Sequences:

>Translated_334_residues
MGLRHAKADAGGTVLESIGRTLATATNGIRALADHLSSDKTFADALVNAVELMGDGDGRVVVSGVGKSGHIGRKIAATLA
STGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIISISSNRESTLARNSEVALVLPKVPE
ACPHGLAPTTSAMLQLAIGDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHGAGQLPLLPVGRPMSEAVIEMS
AKGFGVVGIVDESGKLIGVITDGDLRRHMAGDLLAQPVEDIMSHKPRVVSRDVLASAAMEFMEEHKITVLFLVGDAGAPV
GILHIHDLLRAGVA
>Mature_333_residues
GLRHAKADAGGTVLESIGRTLATATNGIRALADHLSSDKTFADALVNAVELMGDGDGRVVVSGVGKSGHIGRKIAATLAS
TGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIISISSNRESTLARNSEVALVLPKVPEA
CPHGLAPTTSAMLQLAIGDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHGAGQLPLLPVGRPMSEAVIEMSA
KGFGVVGIVDESGKLIGVITDGDLRRHMAGDLLAQPVEDIMSHKPRVVSRDVLASAAMEFMEEHKITVLFLVGDAGAPVG
ILHIHDLLRAGVA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=298, Percent_Identity=44.6308724832215, Blast_Score=241, Evalue=4e-65,
Organism=Escherichia coli, GI87082151, Length=294, Percent_Identity=39.4557823129252, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34856; Mature: 34724

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00191 CYTOCHROME_B5_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRHAKADAGGTVLESIGRTLATATNGIRALADHLSSDKTFADALVNAVELMGDGDGRV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE
VVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAEL
EEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCHHHH
ANMLTYAKRFKVPIISISSNRESTLARNSEVALVLPKVPEACPHGLAPTTSAMLQLAIGD
HHHHHHHHHHCCEEEEECCCCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
ALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHGAGQLPLLPVGRPMSEAVIEMS
HHHHHHHHHCCCCHHHCEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHC
AKGFGVVGIVDESGKLIGVITDGDLRRHMAGDLLAQPVEDIMSHKPRVVSRDVLASAAME
CCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FMEEHKITVLFLVGDAGAPVGILHIHDLLRAGVA
HHHCCCEEEEEEECCCCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure 
GLRHAKADAGGTVLESIGRTLATATNGIRALADHLSSDKTFADALVNAVELMGDGDGRV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE
VVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAEL
EEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCHHHH
ANMLTYAKRFKVPIISISSNRESTLARNSEVALVLPKVPEACPHGLAPTTSAMLQLAIGD
HHHHHHHHHHCCEEEEECCCCCHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
ALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHGAGQLPLLPVGRPMSEAVIEMS
HHHHHHHHHCCCCHHHCEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHC
AKGFGVVGIVDESGKLIGVITDGDLRRHMAGDLLAQPVEDIMSHKPRVVSRDVLASAAME
CCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FMEEHKITVLFLVGDAGAPVGILHIHDLLRAGVA
HHHCCCEEEEEEECCCCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]