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The map label for this gene is dcd [C]

Identifier: 150395362

GI number: 150395362

Start: 148315

End: 149412

Strand: Direct

Name: dcd [C]

Synonym: Smed_0134

Alternate gene names: 150395362

Gene position: 148315-149412 (Clockwise)

Preceding gene: 150395360

Following gene: 150395363

Centisome position: 3.92

GC content: 62.48

Gene sequence:

>1098_bases
ATGGGCCGCGAAACAGGGATTTTGGCCGACCGCGCAATTGCAGCGCTGTTCGGCTCGGGACGTCTGAAGAGCGAGAAGGC
GCTGGATGGGGACCAGATTCAGCCGGCCAGCCTCGATCTTCGCCTTGGATCCACGGCATTCCGTGTCCGGGCAAGCTTCA
TGCCCGGCCCTTCTCATCTGGTGGCCGACAAGCTCGATCGCCTGAAACTGCATGTCATTGATCTCAGCGACGGCGCGGTG
CTCGAAACCGGCTGCGTCTATATCGTACCGCTGATGGAGAGCCTGTCGCTGCCGGCGAACATGTCCGCCTCCGCCAATCC
GAAAAGCTCAACCGGCCGACTCGACATCTTTACACGGGTGATCACCGACAGGGCGCAGGAGTTCGACAAGATCCCGGCCG
GCTACAGCGGTCCGCTCTATCTCGAAATCAGCCCGCGAACCTTTCCGATCGTCGTCAGGCGCGGGTCGCGGCTTTCGCAG
ATACGCTTCCGCGTCGGACACGCGGTTCTCTCCGAGCAGGAACTGCTGGCCCTTCATGAAAGCGACGTGCTCGTTGCAAG
CGATCGGCCAAACGTCTCCGGCGGCGGGATCGCCCTTTCCATCGACCTCAAGGGCACCGGCCCCGACGGGCTGATCGGCT
ATCGCGGCAAGCATCACACATCGGTCGTCGACGTCGACAAGAAAGCCCAGCATGCGGTTTTCGATTTCTGGGAGCCCCTC
TACAGCCGCGGCCGCGATGACCTCATCCTCGACCCGGACGAATTCTACATCCTCGTTTCCCGCGAGGCCGTTCATGTACC
GCCACTCTATGCCGCCGAGATGACGCCGTTCGATCCGCTGGTGGGCGAGTTCCGCGTTCATTATGCCGGTTTCTTTGACC
CCGGGTTCGGCCATGCGTCGGCCGGCGGCAGCGGCAGCCGGGCGGTGCTCGAAGTCCGCAGTCACGAGGTGCCGTTCATT
CTGGAGCATGGCCAGATCGTCGGCCGTCTCATCTACGAACACATGCTGGACCGCCCGGAGGGGCTTTACGGCCTCGACCT
CGGCTCCAATTATCAGGCGCAGGGGCTCAAGCTCTCTAAGCATTTTCGCGCGGAATGA

Upstream 100 bases:

>100_bases
CGGCCAAATCACCACGGGATAAAGCTCCAATACTGCCTGGCTGCGCTTGCGTCAATTCCCGGAGTTTGGTTTTGTCTGGC
AACTGAAGATGAGGATCGGA

Downstream 100 bases:

>100_bases
GGATGAGCGCTTGACAGATCACGCCCATTGAGGAAATTTCCGCTTCTGTTGCGGGTGTAGTTCAGTGGTAGAACGCCAGC
TTCCCAAGCTTGATGTCGTC

Product: 2'-deoxycytidine 5'-triphosphate deaminase

Products: dUTP; NH3

Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MGRETGILADRAIAALFGSGRLKSEKALDGDQIQPASLDLRLGSTAFRVRASFMPGPSHLVADKLDRLKLHVIDLSDGAV
LETGCVYIVPLMESLSLPANMSASANPKSSTGRLDIFTRVITDRAQEFDKIPAGYSGPLYLEISPRTFPIVVRRGSRLSQ
IRFRVGHAVLSEQELLALHESDVLVASDRPNVSGGGIALSIDLKGTGPDGLIGYRGKHHTSVVDVDKKAQHAVFDFWEPL
YSRGRDDLILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHASAGGSGSRAVLEVRSHEVPFI
LEHGQIVGRLIYEHMLDRPEGLYGLDLGSNYQAQGLKLSKHFRAE

Sequences:

>Translated_365_residues
MGRETGILADRAIAALFGSGRLKSEKALDGDQIQPASLDLRLGSTAFRVRASFMPGPSHLVADKLDRLKLHVIDLSDGAV
LETGCVYIVPLMESLSLPANMSASANPKSSTGRLDIFTRVITDRAQEFDKIPAGYSGPLYLEISPRTFPIVVRRGSRLSQ
IRFRVGHAVLSEQELLALHESDVLVASDRPNVSGGGIALSIDLKGTGPDGLIGYRGKHHTSVVDVDKKAQHAVFDFWEPL
YSRGRDDLILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHASAGGSGSRAVLEVRSHEVPFI
LEHGQIVGRLIYEHMLDRPEGLYGLDLGSNYQAQGLKLSKHFRAE
>Mature_364_residues
GRETGILADRAIAALFGSGRLKSEKALDGDQIQPASLDLRLGSTAFRVRASFMPGPSHLVADKLDRLKLHVIDLSDGAVL
ETGCVYIVPLMESLSLPANMSASANPKSSTGRLDIFTRVITDRAQEFDKIPAGYSGPLYLEISPRTFPIVVRRGSRLSQI
RFRVGHAVLSEQELLALHESDVLVASDRPNVSGGGIALSIDLKGTGPDGLIGYRGKHHTSVVDVDKKAQHAVFDFWEPLY
SRGRDDLILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHASAGGSGSRAVLEVRSHEVPFIL
EHGQIVGRLIYEHMLDRPEGLYGLDLGSNYQAQGLKLSKHFRAE

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.13

Molecular weight: Translated: 39880; Mature: 39749

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRETGILADRAIAALFGSGRLKSEKALDGDQIQPASLDLRLGSTAFRVRASFMPGPSHL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCHHH
VADKLDRLKLHVIDLSDGAVLETGCVYIVPLMESLSLPANMSASANPKSSTGRLDIFTRV
HHHHHCCEEEEEEECCCCCEEECCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
ITDRAQEFDKIPAGYSGPLYLEISPRTFPIVVRRGSRLSQIRFRVGHAVLSEQELLALHE
HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHEEECC
SDVLVASDRPNVSGGGIALSIDLKGTGPDGLIGYRGKHHTSVVDVDKKAQHAVFDFWEPL
CCEEEECCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHH
YSRGRDDLILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHAS
HHCCCCCEEECCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
AGGSGSRAVLEVRSHEVPFILEHGQIVGRLIYEHMLDRPEGLYGLDLGSNYQAQGLKLSK
CCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECH
HFRAE
HCCCC
>Mature Secondary Structure 
GRETGILADRAIAALFGSGRLKSEKALDGDQIQPASLDLRLGSTAFRVRASFMPGPSHL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCHHH
VADKLDRLKLHVIDLSDGAVLETGCVYIVPLMESLSLPANMSASANPKSSTGRLDIFTRV
HHHHHCCEEEEEEECCCCCEEECCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
ITDRAQEFDKIPAGYSGPLYLEISPRTFPIVVRRGSRLSQIRFRVGHAVLSEQELLALHE
HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHEEECC
SDVLVASDRPNVSGGGIALSIDLKGTGPDGLIGYRGKHHTSVVDVDKKAQHAVFDFWEPL
CCEEEECCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHH
YSRGRDDLILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHAS
HHCCCCCEEECCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
AGGSGSRAVLEVRSHEVPFILEHGQIVGRLIYEHMLDRPEGLYGLDLGSNYQAQGLKLSK
CCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECH
HFRAE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dCTP; H2O

Specific reaction: dCTP + H2O = dUTP + NH3

General reaction: Amidine hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA