| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is artI [H]
Identifier: 150395363
GI number: 150395363
Start: 149658
End: 150509
Strand: Direct
Name: artI [H]
Synonym: Smed_0135
Alternate gene names: 150395363
Gene position: 149658-150509 (Clockwise)
Preceding gene: 150395362
Following gene: 150395368
Centisome position: 3.96
GC content: 61.5
Gene sequence:
>852_bases ATGCCGAGCGCATTCTTTCTGCGAATTTGCCGGATCTTCCTTCTCTCGGCCGTTCTTGGTGCCGGATCTGCCATGGCGCA GCCCAAGGATCTGCCCAGGCTTTTTGACGCTCGCGAGCGCATTGCAAGGCCCGACTTGAGCGGGCTTGCCAGGCTTCGCT TCCTGACGACGGTCGATTTCCCGCCCTTCAATTTCATCGATCAATCGGGCAAGCTGTCGGGCTTCCATGTCGACCTTGCC CGCGAGATCTGCCGGGAGCTGGAGATCGAGGCAAAATGCCAGATCCAGGCGGTGACCTATCCGGAGCTCATGCCTGCACT CGAACAGGGACAGGGCGAAGCGATCGCCGCCGGGATCTCCGTGACTTCGGAGTTGAGGCAGCGTTTCGCCTTCTCCCGAG CCTTCATGCAACTGCCGGCCCGCTTCGTCGTCAACACGAAGGCTGCACCTGCGATCACCGGGCCTGCCGATCTCGCGCAG AGGCCCGTCGGCGTCGTTTCCGGCACCATCCATGAGGCCATGCTGAAGGCGTTCTTCCCCGAGCTCGAGGCGAAAGGGTT TTCCGACCGGGATTCGCTGCTTTCCGCGCTTCGCGAGGGGGCGGTTGCGGCTGCATTTTCCGACGGAATGCAGCTTTCCT TCTGGGTATCCGGCAGCCTGGCCGGGGGATGCTGCGCCGTGATTGAAGGCTCCTATTTCTCCCAACGGTTCCTCGGCGAG GGGCTGACGATCATGAACCGAAAGGCCGAGCCTGCCCTCACTCAGGCGATCGACCATGCGCTTTTGGCGCTCTCACGCAG CGGCAGGCTCGAGGAGATCTACCTGCGCTATTTTCCGAATGGGATTTATTAG
Upstream 100 bases:
>100_bases CGAGCGAGAGGTGCTGTAGCCAGTGCGGCCGCATCTCTATAGTCTTGATCATGAACCGAAACCGCGTCCTCCACCCGTGG CTAACCCGAACTGGACCGCA
Downstream 100 bases:
>100_bases AGCGGGATGAGGAAAAGCGTGCGCGGTTTTCCACCCGCATCTCGCGCCAGCCTAAGCAGCAGCGTCGGCGTTTGCTTATG CGACTTGCTGTTCCCGCATG
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MPSAFFLRICRIFLLSAVLGAGSAMAQPKDLPRLFDARERIARPDLSGLARLRFLTTVDFPPFNFIDQSGKLSGFHVDLA REICRELEIEAKCQIQAVTYPELMPALEQGQGEAIAAGISVTSELRQRFAFSRAFMQLPARFVVNTKAAPAITGPADLAQ RPVGVVSGTIHEAMLKAFFPELEAKGFSDRDSLLSALREGAVAAAFSDGMQLSFWVSGSLAGGCCAVIEGSYFSQRFLGE GLTIMNRKAEPALTQAIDHALLALSRSGRLEEIYLRYFPNGIY
Sequences:
>Translated_283_residues MPSAFFLRICRIFLLSAVLGAGSAMAQPKDLPRLFDARERIARPDLSGLARLRFLTTVDFPPFNFIDQSGKLSGFHVDLA REICRELEIEAKCQIQAVTYPELMPALEQGQGEAIAAGISVTSELRQRFAFSRAFMQLPARFVVNTKAAPAITGPADLAQ RPVGVVSGTIHEAMLKAFFPELEAKGFSDRDSLLSALREGAVAAAFSDGMQLSFWVSGSLAGGCCAVIEGSYFSQRFLGE GLTIMNRKAEPALTQAIDHALLALSRSGRLEEIYLRYFPNGIY >Mature_282_residues PSAFFLRICRIFLLSAVLGAGSAMAQPKDLPRLFDARERIARPDLSGLARLRFLTTVDFPPFNFIDQSGKLSGFHVDLAR EICRELEIEAKCQIQAVTYPELMPALEQGQGEAIAAGISVTSELRQRFAFSRAFMQLPARFVVNTKAAPAITGPADLAQR PVGVVSGTIHEAMLKAFFPELEAKGFSDRDSLLSALREGAVAAAFSDGMQLSFWVSGSLAGGCCAVIEGSYFSQRFLGEG LTIMNRKAEPALTQAIDHALLALSRSGRLEEIYLRYFPNGIY
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=229, Percent_Identity=28.82096069869, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787085, Length=235, Percent_Identity=23.4042553191489, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1788649, Length=234, Percent_Identity=26.4957264957265, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788648, Length=237, Percent_Identity=26.1603375527426, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788228, Length=222, Percent_Identity=22.972972972973, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30859; Mature: 30728
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAFFLRICRIFLLSAVLGAGSAMAQPKDLPRLFDARERIARPDLSGLARLRFLTTVDF CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC PPFNFIDQSGKLSGFHVDLAREICRELEIEAKCQIQAVTYPELMPALEQGQGEAIAAGIS CCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCEEEHHHH VTSELRQRFAFSRAFMQLPARFVVNTKAAPAITGPADLAQRPVGVVSGTIHEAMLKAFFP HHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH ELEAKGFSDRDSLLSALREGAVAAAFSDGMQLSFWVSGSLAGGCCAVIEGSYFSQRFLGE HHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHC GLTIMNRKAEPALTQAIDHALLALSRSGRLEEIYLRYFPNGIY CCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC >Mature Secondary Structure PSAFFLRICRIFLLSAVLGAGSAMAQPKDLPRLFDARERIARPDLSGLARLRFLTTVDF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC PPFNFIDQSGKLSGFHVDLAREICRELEIEAKCQIQAVTYPELMPALEQGQGEAIAAGIS CCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCEEEHHHH VTSELRQRFAFSRAFMQLPARFVVNTKAAPAITGPADLAQRPVGVVSGTIHEAMLKAFFP HHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH ELEAKGFSDRDSLLSALREGAVAAAFSDGMQLSFWVSGSLAGGCCAVIEGSYFSQRFLGE HHHCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHC GLTIMNRKAEPALTQAIDHALLALSRSGRLEEIYLRYFPNGIY CCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]