| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is hslO [H]
Identifier: 150395357
GI number: 150395357
Start: 143372
End: 144364
Strand: Direct
Name: hslO [H]
Synonym: Smed_0129
Alternate gene names: 150395357
Gene position: 143372-144364 (Clockwise)
Preceding gene: 150395356
Following gene: 150395360
Centisome position: 3.79
GC content: 62.94
Gene sequence:
>993_bases ATGACAGAAACAGCGCCGGGACTCGGCGAGTTCGATTTTGCCGGTGACGATCAGGTCGTGCCCTTCCAGGTCGAGGGGCT CGACGTGCGCGGCCGCGCCGTTCAACTTGGTCCGATGCTGGATGCAATTCTCGAGCGGCACAGCTATCCGCTTCCGGTAG CCCGGCTTGTCGCCGAAACCGTGGTGCTGACAGTGCTGCTCGGGACGTCCCTTAAATTCGAAGGCAAGCTGATCGTCCAG ACACAGGGTGATGGGCCGGTTGACCTCGTTGTCGCGGACTTCTCGACGCCGGACCGCGTTCGCGCCTATGCCCGCTACGA TGAGGAGGCGCTTGCCGCTGCCGAGAAAAACGGGCGGTCCCAGCCTCACGAGCTGCTGGGTAACGGCATTCTCGCCTTCA CCATCGACCAGGGTGCGCATACGCAGCGCTACCAGGGCATCGTCGCGCTTGACGGAGCGACGCTCGAGGAGATCGCGGGC GCCTATTTCCGGCAATCGGAGCAGATACCGACCAGGGTGCGTCTCGCCGTTGCCGAGCTTCTCGACAAGGACGAGAACGG CAAGCCTCGGCATCGCTGGCGCGCCGGCGGCATGGTCGCGCAGTTCCTGCCCGATGCGCCCGACCGGATGCGACAGCCGG ATCTGCCGGGCGGCGACGGCGAGGCAGACATCGAGGATATCTTTGACGAGGACGATCTATGGGCGGAAGCCAAGGTGATG GTCGAGACGATCGACACCGATGAGCTCACCGATCCCACAGTCGGAACCGAAAGACTGCTGTACCGGCTGTTTCACGAGCG CGGTGTTCGCGTCTATGAACCGCAGGCGGTCTATGACCGCTGCAGCTGCTCGCGCGAGAAAATCAGGGATGTTCTGACTG GGCTCGGCGACGAAGATATCGAAAGCAGTGTCGAGGACGGGCTGATCAAGGTCACCTGCGAGTTCTGTTCGACGACCTAC CGCTTCGAGGCGAGTGAGGTCCGTACCCAGTGA
Upstream 100 bases:
>100_bases CAGTTTCCGTCCGGAGCCCGAATGGAGTTTGAAAGGGCCATGGCCACAATCCCCGGATTGGATCAATTCGGATGATCATG GTCGAGGCAAGGAGCAAGCA
Downstream 100 bases:
>100_bases GAAGCTGCCCAGGCTTCAAGTCTCCCGTGCCCGGCAGGCGGTCGCTTGCGGGGAGAAGGAGGCCGGCAGGCCGCATGAGG GCGCTTTTCTAGTTAAGGGT
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTETAPGLGEFDFAGDDQVVPFQVEGLDVRGRAVQLGPMLDAILERHSYPLPVARLVAETVVLTVLLGTSLKFEGKLIVQ TQGDGPVDLVVADFSTPDRVRAYARYDEEALAAAEKNGRSQPHELLGNGILAFTIDQGAHTQRYQGIVALDGATLEEIAG AYFRQSEQIPTRVRLAVAELLDKDENGKPRHRWRAGGMVAQFLPDAPDRMRQPDLPGGDGEADIEDIFDEDDLWAEAKVM VETIDTDELTDPTVGTERLLYRLFHERGVRVYEPQAVYDRCSCSREKIRDVLTGLGDEDIESSVEDGLIKVTCEFCSTTY RFEASEVRTQ
Sequences:
>Translated_330_residues MTETAPGLGEFDFAGDDQVVPFQVEGLDVRGRAVQLGPMLDAILERHSYPLPVARLVAETVVLTVLLGTSLKFEGKLIVQ TQGDGPVDLVVADFSTPDRVRAYARYDEEALAAAEKNGRSQPHELLGNGILAFTIDQGAHTQRYQGIVALDGATLEEIAG AYFRQSEQIPTRVRLAVAELLDKDENGKPRHRWRAGGMVAQFLPDAPDRMRQPDLPGGDGEADIEDIFDEDDLWAEAKVM VETIDTDELTDPTVGTERLLYRLFHERGVRVYEPQAVYDRCSCSREKIRDVLTGLGDEDIESSVEDGLIKVTCEFCSTTY RFEASEVRTQ >Mature_329_residues TETAPGLGEFDFAGDDQVVPFQVEGLDVRGRAVQLGPMLDAILERHSYPLPVARLVAETVVLTVLLGTSLKFEGKLIVQT QGDGPVDLVVADFSTPDRVRAYARYDEEALAAAEKNGRSQPHELLGNGILAFTIDQGAHTQRYQGIVALDGATLEEIAGA YFRQSEQIPTRVRLAVAELLDKDENGKPRHRWRAGGMVAQFLPDAPDRMRQPDLPGGDGEADIEDIFDEDDLWAEAKVMV ETIDTDELTDPTVGTERLLYRLFHERGVRVYEPQAVYDRCSCSREKIRDVLTGLGDEDIESSVEDGLIKVTCEFCSTTYR FEASEVRTQ
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=312, Percent_Identity=36.5384615384615, Blast_Score=174, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 36561; Mature: 36430
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETAPGLGEFDFAGDDQVVPFQVEGLDVRGRAVQLGPMLDAILERHSYPLPVARLVAET CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHH VVLTVLLGTSLKFEGKLIVQTQGDGPVDLVVADFSTPDRVRAYARYDEEALAAAEKNGRS HHHHHHHCCCEEECCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCC QPHELLGNGILAFTIDQGAHTQRYQGIVALDGATLEEIAGAYFRQSEQIPTRVRLAVAEL CCHHHHHCCEEEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHH LDKDENGKPRHRWRAGGMVAQFLPDAPDRMRQPDLPGGDGEADIEDIFDEDDLWAEAKVM HCCCCCCCCHHHHHHCCCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHEEE VETIDTDELTDPTVGTERLLYRLFHERGVRVYEPQAVYDRCSCSREKIRDVLTGLGDEDI EEECCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHCCCHHHHHHHHHCCCCHHH ESSVEDGLIKVTCEFCSTTYRFEASEVRTQ HHHHHCCEEEEEEHHHCCEEEEEHHHHCCC >Mature Secondary Structure TETAPGLGEFDFAGDDQVVPFQVEGLDVRGRAVQLGPMLDAILERHSYPLPVARLVAET CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHH VVLTVLLGTSLKFEGKLIVQTQGDGPVDLVVADFSTPDRVRAYARYDEEALAAAEKNGRS HHHHHHHCCCEEECCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCC QPHELLGNGILAFTIDQGAHTQRYQGIVALDGATLEEIAGAYFRQSEQIPTRVRLAVAEL CCHHHHHCCEEEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHH LDKDENGKPRHRWRAGGMVAQFLPDAPDRMRQPDLPGGDGEADIEDIFDEDDLWAEAKVM HCCCCCCCCHHHHHHCCCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHEEE VETIDTDELTDPTVGTERLLYRLFHERGVRVYEPQAVYDRCSCSREKIRDVLTGLGDEDI EEECCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHCCCHHHHHHHHHCCCCHHH ESSVEDGLIKVTCEFCSTTYRFEASEVRTQ HHHHHCCEEEEEEHHHCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA