| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395341
Identifier: 150395341
GI number: 150395341
Start: 125931
End: 126542
Strand: Direct
Name: 150395341
Synonym: Smed_0113
Alternate gene names: NA
Gene position: 125931-126542 (Clockwise)
Preceding gene: 150395340
Following gene: 150395342
Centisome position: 3.33
GC content: 63.89
Gene sequence:
>612_bases GTGATCGACCTCGCGCTGATCGGTCTCACGCGGTTCATCGTCGGCGGGCAGGCGCGTTGGACGGGCTCGTTGCCAGAGAT GCGCCAGCGGATCTATTTCGCCAATCACTCCAGCCATCTCGATACCCTTCTGATCTGGTCGGCGTTGCCGCGCGGGCTGC GTGCGTCGACGCATCCGATTGCCGCAGCGGACTATTGGGGGAAGGGGATCGTCAGGCGTCATATAGGTGTCAAGGTGCTG AACGGCGTCCTCATCGAGCGCTCGACACAGGGGCCGCCTGGAGCGGCGCTCGCTCCGTTGCGTAACGTGCTCTCCGAGGG CGAGTCGCTCATCCTGTTCCCCGAAGGCTCGCGTGGCAGCGAGCGGCTGCCGGGGCCTTTCAAGAGCGGGCTTTACTGGC TGTCGCAAGAATTCCCCGATGTGCAACTAGTCCCGACCTATCTGGACAATCCTTCGCGCGCTTTTCCGAAGGGCACGTTT TTGCCTGTCCCCATCAGTTGCACCGTGCGTTTCGGCCCTCCGCTTGTGCGTCACGCCGGTGAAGAGAAGGACGCATTCCT CGAACGCGCCCGCGCAGCGGTGTCTGCACTCGCGCCGGACTCCCTCGGATGA
Upstream 100 bases:
>100_bases TGCTCTATACGACGGCGTGGATCATCCTTGCCGGTTCGCTCCTGACATGTTTCGCCCGCACGCGGGCCATCGTTTCCCGC ATCCGGGGAGAGACGAAACC
Downstream 100 bases:
>100_bases GCACGCCATGTCCTTGAGCGACAAACTTCTTATCCTCTTTGGCGGCGTAGGCGCCCTTCTCGGCGCGGCATCATTGATCG GCTTTGTGCTTTCGCGCCGC
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Acyltransferase; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase Protein; Acyltransferase Domain Protein; Phospholipd Biosynthesis-Like Protein
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIDLALIGLTRFIVGGQARWTGSLPEMRQRIYFANHSSHLDTLLIWSALPRGLRASTHPIAAADYWGKGIVRRHIGVKVL NGVLIERSTQGPPGAALAPLRNVLSEGESLILFPEGSRGSERLPGPFKSGLYWLSQEFPDVQLVPTYLDNPSRAFPKGTF LPVPISCTVRFGPPLVRHAGEEKDAFLERARAAVSALAPDSLG
Sequences:
>Translated_203_residues MIDLALIGLTRFIVGGQARWTGSLPEMRQRIYFANHSSHLDTLLIWSALPRGLRASTHPIAAADYWGKGIVRRHIGVKVL NGVLIERSTQGPPGAALAPLRNVLSEGESLILFPEGSRGSERLPGPFKSGLYWLSQEFPDVQLVPTYLDNPSRAFPKGTF LPVPISCTVRFGPPLVRHAGEEKDAFLERARAAVSALAPDSLG >Mature_203_residues MIDLALIGLTRFIVGGQARWTGSLPEMRQRIYFANHSSHLDTLLIWSALPRGLRASTHPIAAADYWGKGIVRRHIGVKVL NGVLIERSTQGPPGAALAPLRNVLSEGESLILFPEGSRGSERLPGPFKSGLYWLSQEFPDVQLVPTYLDNPSRAFPKGTF LPVPISCTVRFGPPLVRHAGEEKDAFLERARAAVSALAPDSLG
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22100; Mature: 22100
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLALIGLTRFIVGGQARWTGSLPEMRQRIYFANHSSHLDTLLIWSALPRGLRASTHPI CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCC AAADYWGKGIVRRHIGVKVLNGVLIERSTQGPPGAALAPLRNVLSEGESLILFPEGSRGS CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC ERLPGPFKSGLYWLSQEFPDVQLVPTYLDNPSRAFPKGTFLPVPISCTVRFGPPLVRHAG CCCCCCHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCEEECCEEEEEECCCHHHHHCC EEKDAFLERARAAVSALAPDSLG CHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIDLALIGLTRFIVGGQARWTGSLPEMRQRIYFANHSSHLDTLLIWSALPRGLRASTHPI CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCC AAADYWGKGIVRRHIGVKVLNGVLIERSTQGPPGAALAPLRNVLSEGESLILFPEGSRGS CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC ERLPGPFKSGLYWLSQEFPDVQLVPTYLDNPSRAFPKGTFLPVPISCTVRFGPPLVRHAG CCCCCCHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCEEECCEEEEEECCCHHHHHCC EEKDAFLERARAAVSALAPDSLG CHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA