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The map label for this gene is ynbB [H]

Identifier: 150395342

GI number: 150395342

Start: 126550

End: 127491

Strand: Direct

Name: ynbB [H]

Synonym: Smed_0114

Alternate gene names: 150395342

Gene position: 126550-127491 (Clockwise)

Preceding gene: 150395341

Following gene: 150395344

Centisome position: 3.35

GC content: 62.31

Gene sequence:

>942_bases
ATGTCCTTGAGCGACAAACTTCTTATCCTCTTTGGCGGCGTAGGCGCCCTTCTCGGCGCGGCATCATTGATCGGCTTTGT
GCTTTCGCGCCGCGCGACGTCTGAAACGGGGCGGGCGACGATCGACAATCTCAATGCCCGTATCAGGGCATGGTGGGTGA
TGATCGCCATCTTCGCGGTGAGTTTCGCTCTCGGGCGTGGGGTGACGATGGTGCTTTTTGCGCTCACCTCCTTCTACACG
CTGCGCGAATTCGTCTCGCTGACGCCGACGCGTGCAGCCGATCACCTGCCGCTCGTTGCAGCATTCTACGTTCTGCTGCC
GCTTCAGTACTGGCTGATCTCGATCGACTGGTATGCGCTTTTCACCATTCTCATACCGGTCTACGGCTTCCTGCTCCTGC
CGAGCCTCGCCGCGCTCAAGGGCGACACGGAGCAGTTCCTGCTGCGCGTCTCGCGGATCCAGTGGGGCCTGATGCTGACC
GTCTATTGCATCAGCCACGCGCCGGCGCTCCTGACACTCGACATCCCCGGCCGCCCGGGCGAGGGCTTCCTGCTCCTCTT
CTTTCTCATCACCATCGCTCAGTTCAGCGATGTCATGCAGTACGTCTTCGGCAAGCTGTTCGGCCGGACGAAGATCGCGC
CCGTCGTCAGCCCCTCGAAAACGGCCGAAGGACTTGTCGGCGGCGGCCTATCGGCCGTGGCTGCCGGCGCCGCGCTCTGG
TGGATAACGCCCTTCACGCCCCTGGAGGCGGCGGCGATGGCTTTCGCCATCGTTGCCATGGGTTTCCTCGGCGGCCTCGC
ACTTTCGGCCGTGAAGCGCTCGATGGCCGTGAAGGACTGGGGTTCGATGATCAGCGGTCACGGCGGCGTGCTCGACCGCA
TGGATTCACTGAGCTTCGCGGCGCCGGTTTTCTTTCACCTGACGCGATATTTTTATACGTGA

Upstream 100 bases:

>100_bases
CCGCTTGTGCGTCACGCCGGTGAAGAGAAGGACGCATTCCTCGAACGCGCCCGCGCAGCGGTGTCTGCACTCGCGCCGGA
CTCCCTCGGATGAGCACGCC

Downstream 100 bases:

>100_bases
GGGTCGCCGGGCGGTGCGTTGGAGCGCGGAATGATTTTGAGTACGGAGAAAAAATTGGTGCCGCTTACGTGACTCGAACA
CGTGACCCCATCATTACGAA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSLSDKLLILFGGVGALLGAASLIGFVLSRRATSETGRATIDNLNARIRAWWVMIAIFAVSFALGRGVTMVLFALTSFYT
LREFVSLTPTRAADHLPLVAAFYVLLPLQYWLISIDWYALFTILIPVYGFLLLPSLAALKGDTEQFLLRVSRIQWGLMLT
VYCISHAPALLTLDIPGRPGEGFLLLFFLITIAQFSDVMQYVFGKLFGRTKIAPVVSPSKTAEGLVGGGLSAVAAGAALW
WITPFTPLEAAAMAFAIVAMGFLGGLALSAVKRSMAVKDWGSMISGHGGVLDRMDSLSFAAPVFFHLTRYFYT

Sequences:

>Translated_313_residues
MSLSDKLLILFGGVGALLGAASLIGFVLSRRATSETGRATIDNLNARIRAWWVMIAIFAVSFALGRGVTMVLFALTSFYT
LREFVSLTPTRAADHLPLVAAFYVLLPLQYWLISIDWYALFTILIPVYGFLLLPSLAALKGDTEQFLLRVSRIQWGLMLT
VYCISHAPALLTLDIPGRPGEGFLLLFFLITIAQFSDVMQYVFGKLFGRTKIAPVVSPSKTAEGLVGGGLSAVAAGAALW
WITPFTPLEAAAMAFAIVAMGFLGGLALSAVKRSMAVKDWGSMISGHGGVLDRMDSLSFAAPVFFHLTRYFYT
>Mature_312_residues
SLSDKLLILFGGVGALLGAASLIGFVLSRRATSETGRATIDNLNARIRAWWVMIAIFAVSFALGRGVTMVLFALTSFYTL
REFVSLTPTRAADHLPLVAAFYVLLPLQYWLISIDWYALFTILIPVYGFLLLPSLAALKGDTEQFLLRVSRIQWGLMLTV
YCISHAPALLTLDIPGRPGEGFLLLFFLITIAQFSDVMQYVFGKLFGRTKIAPVVSPSKTAEGLVGGGLSAVAAGAALWW
ITPFTPLEAAAMAFAIVAMGFLGGLALSAVKRSMAVKDWGSMISGHGGVLDRMDSLSFAAPVFFHLTRYFYT

Specific function: Unknown

COG id: COG4589

COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI1787677, Length=297, Percent_Identity=40.7407407407407, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI87081696, Length=126, Percent_Identity=38.8888888888889, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: NA

Molecular weight: Translated: 33951; Mature: 33819

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSDKLLILFGGVGALLGAASLIGFVLSRRATSETGRATIDNLNARIRAWWVMIAIFAV
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SFALGRGVTMVLFALTSFYTLREFVSLTPTRAADHLPLVAAFYVLLPLQYWLISIDWYAL
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FTILIPVYGFLLLPSLAALKGDTEQFLLRVSRIQWGLMLTVYCISHAPALLTLDIPGRPG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
EGFLLLFFLITIAQFSDVMQYVFGKLFGRTKIAPVVSPSKTAEGLVGGGLSAVAAGAALW
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHCCCHHHHHHHHHHE
WITPFTPLEAAAMAFAIVAMGFLGGLALSAVKRSMAVKDWGSMISGHGGVLDRMDSLSFA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
APVFFHLTRYFYT
HHHHHHHHHHHCC
>Mature Secondary Structure 
SLSDKLLILFGGVGALLGAASLIGFVLSRRATSETGRATIDNLNARIRAWWVMIAIFAV
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SFALGRGVTMVLFALTSFYTLREFVSLTPTRAADHLPLVAAFYVLLPLQYWLISIDWYAL
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FTILIPVYGFLLLPSLAALKGDTEQFLLRVSRIQWGLMLTVYCISHAPALLTLDIPGRPG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
EGFLLLFFLITIAQFSDVMQYVFGKLFGRTKIAPVVSPSKTAEGLVGGGLSAVAAGAALW
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHCCCHHHHHHHHHHE
WITPFTPLEAAAMAFAIVAMGFLGGLALSAVKRSMAVKDWGSMISGHGGVLDRMDSLSFA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
APVFFHLTRYFYT
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]