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The map label for this gene is ydiK [C]

Identifier: 150395339

GI number: 150395339

Start: 123998

End: 125173

Strand: Direct

Name: ydiK [C]

Synonym: Smed_0111

Alternate gene names: 150395339

Gene position: 123998-125173 (Clockwise)

Preceding gene: 150395336

Following gene: 150395340

Centisome position: 3.28

GC content: 63.95

Gene sequence:

>1176_bases
GTGCAATTGGGCAATCGCGAACGAGAAAACCTTCCCGTGGAGCCGCGGCTCTTCGGGCAGCCCGCACACTCACGGTCCGC
CCTCGTCGTGCCGATCTCGGCCGCCCGGTGGTTGCTCGTCCTCGTTCTGCTTGCCGGCGTCTATTTCTTTCACGGTTTCC
TCGTTCCGGTCCTCGCGGCGGTCGTCATCGGCTTCGCGAGCTGGCCGATCTACTGGCGGATGCTTCAGGCCCTGAACGGC
AACCGTACGCTCGCCGCGACGATCGCCCTCATTTGCGTGGTCGCCTTCATCGTCGTGCCGATTTCGCTTGCCGCGATCTA
TGCCGTGGACGAAGTGCGCAGCGGGCTCGTCTGGGCCGTCGAGACCAACGCGAACGGCGCTCCCGCGCCCGCCTGGCTCG
CAACGATCCCGGCGGTAGGCGCGTGGCTGGGCGAGCAATGGGTCAAAAATGTCGGGCATCCAGGCGCTCTCGGAGAATTG
GTGCAGCTCGTCAGTGGCTCCAACATCGGCAATATTTATCGCGGCGTGCTCGTGGTCGGCGCCTCTGCCTTCCAATCCTT
TCTGACGCTCCTGTTCATGCTGATCACGCTGTTCTTCGTCTACCGGGACGGCCATTCCTTTTCAAAGCAGCTCGATCACC
TTGGCGAGCGGATCTTTCCGATGCGCTGGGAACGCCTGTCCCGCGTGGTGCCCCTTACGATCAGCTCGACGGTCACCGGC
ATGGGCATCATCGCGATCGGCGAAGGGATCGTGCTCGGCGTCGCCTATTGGCTCGCCGGCGTGCCCTCGCCCGTCACGCT
CGGCATCATCACCGGCCTCATGGCGCTTGTGCCGGGCGGCGCACCGCTCTGCTTCACGCTCGTTTCGGTCTATCTCGTCG
CAAGCGGTTCGCCTATCCACGGGATCGCGCTGTTCACCTGGGGAACGACGGAGCTCTTCATCGTAGACAAGACATTGCGC
CCGAGGCTTGTCGGCGGGCCGATCAAGCTTCCCTTCCTGCCGACCTTTTTCGGCCTGGTCGGGGGCGTCAAGACGATGGG
TTTCCTCGGCCTCTTCGTCGGTCCGGTGCTGATGGCGCTGCTCGTCGCCATCTGGCGCGAATGGCTGCGCGAGGTGACAA
GCCAACCGGAGCCGGCCGACGACAAGATCTCCAGGGTGGATCTTTCCGTCAAGTGA

Upstream 100 bases:

>100_bases
GGGCCGCCATGATTGCGCCGGAAACCGCGTTCAGCGGAGGGAAACAAAGCTGGCAAGGGTTCGGGTTTGCTGTAAGGTTG
TGAGAGACGGAGGAGTACTG

Downstream 100 bases:

>100_bases
GAGCGGAATTGACGGCCACGCGGCTGTATGGCATTGCGTTGAAGTTGTTTTAGGACGAATTGCAATCTTTAATTCGTAGG
TCGTATTCCTCGCACATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MQLGNRERENLPVEPRLFGQPAHSRSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAAVVIGFASWPIYWRMLQALNG
NRTLAATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAVETNANGAPAPAWLATIPAVGAWLGEQWVKNVGHPGALGEL
VQLVSGSNIGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRDGHSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTG
MGIIAIGEGIVLGVAYWLAGVPSPVTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIHGIALFTWGTTELFIVDKTLR
PRLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPADDKISRVDLSVK

Sequences:

>Translated_391_residues
MQLGNRERENLPVEPRLFGQPAHSRSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAAVVIGFASWPIYWRMLQALNG
NRTLAATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAVETNANGAPAPAWLATIPAVGAWLGEQWVKNVGHPGALGEL
VQLVSGSNIGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRDGHSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTG
MGIIAIGEGIVLGVAYWLAGVPSPVTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIHGIALFTWGTTELFIVDKTLR
PRLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPADDKISRVDLSVK
>Mature_391_residues
MQLGNRERENLPVEPRLFGQPAHSRSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAAVVIGFASWPIYWRMLQALNG
NRTLAATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAVETNANGAPAPAWLATIPAVGAWLGEQWVKNVGHPGALGEL
VQLVSGSNIGNIYRGVLVVGASAFQSFLTLLFMLITLFFVYRDGHSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTG
MGIIAIGEGIVLGVAYWLAGVPSPVTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIHGIALFTWGTTELFIVDKTLR
PRLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMALLVAIWREWLREVTSQPEPADDKISRVDLSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=344, Percent_Identity=25.2906976744186, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42082; Mature: 42082

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLGNRERENLPVEPRLFGQPAHSRSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVIGFASWPIYWRMLQALNGNRTLAATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ETNANGAPAPAWLATIPAVGAWLGEQWVKNVGHPGALGELVQLVSGSNIGNIYRGVLVVG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
ASAFQSFLTLLFMLITLFFVYRDGHSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHCCEECEEEHHHHHC
MGIIAIGEGIVLGVAYWLAGVPSPVTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIH
CEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
GIALFTWGTTELFIVDKTLRPRLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMAL
EEEEEEECCEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAIWREWLREVTSQPEPADDKISRVDLSVK
HHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MQLGNRERENLPVEPRLFGQPAHSRSALVVPISAARWLLVLVLLAGVYFFHGFLVPVLAA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVIGFASWPIYWRMLQALNGNRTLAATIALICVVAFIVVPISLAAIYAVDEVRSGLVWAV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
ETNANGAPAPAWLATIPAVGAWLGEQWVKNVGHPGALGELVQLVSGSNIGNIYRGVLVVG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
ASAFQSFLTLLFMLITLFFVYRDGHSFSKQLDHLGERIFPMRWERLSRVVPLTISSTVTG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHCCEECEEEHHHHHC
MGIIAIGEGIVLGVAYWLAGVPSPVTLGIITGLMALVPGGAPLCFTLVSVYLVASGSPIH
CEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
GIALFTWGTTELFIVDKTLRPRLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFVGPVLMAL
EEEEEEECCEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAIWREWLREVTSQPEPADDKISRVDLSVK
HHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]