| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is frcK [H]
Identifier: 150395333
GI number: 150395333
Start: 116241
End: 116861
Strand: Direct
Name: frcK [H]
Synonym: Smed_0105
Alternate gene names: 150395333
Gene position: 116241-116861 (Clockwise)
Preceding gene: 150395332
Following gene: 150395334
Centisome position: 3.07
GC content: 65.22
Gene sequence:
>621_bases ATGAGCATCAAATCCCTTGTGGATGAAATCCTGAAGCGGGCGGCTCAGTCCGGCCGCTTCATTGCCGCCATAGCCGGTCC GCCCGGCGCAGGTAAGTCCACGCTTTCGGAAGCGCTTGCCGGCGCAATCGCCGAGGCGGGGGGGAGCGCGGCGGTGTTGC CGATGGACGGCTTCCACATGGACAACGCCGTTCTCGTCGAGAAAGGGCTGCTCGCCCGCAAGGGGGCGCCAGAGACCTTC GACGTCCGATCCTTTCTCGCAACGCTCGCGGCCGTGCGCGCCGATGACGGGGAAGTTCTCGTCCCGGTCTTCGACCGCTC CCGGGAACTCGCGATCGCCTCTGCGCGGATCATCGCGCCTCAGACGCGCATCGTCCTTGTCGAGGGCAACTATCTGCTGC TCGACGAGGCGCCCTGGACCCGGCTCGACGGCGCGTTCGACTATACGATCTTCGTCGATCCCGGTCTGGAGGTGCTCGAA CGGCGACTGCTGCAGCGCTGGTCCGATCACGGCTTTGACGACGAAGCGGCGCGCAGCAAGGCCTATGGCAACGATATACC AAATGCACGCCGGGTCGTCGAAAGGCGCAGACCAGCGGACACCGTGATCCGGGACTTCTAG
Upstream 100 bases:
>100_bases GCCGCCGGCTCTGCATCATCAATCCGAAGGATTACACCATGTCGGATGCGGTGGCTTTCATGACCGGCGCGAAGGAGCCG CCGCGCGAGGCGATTGCGGC
Downstream 100 bases:
>100_bases AAGGGGCGCTAAAGGTCGCCCGGGCTCCGACCGCTGGCCGCCCTGGACCTTTCGAATCGCCATTGTCTTCGGCGGAGCAA TGATGGTATCGAGGCTCGGT
Product: putative fructose transport system kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSIKSLVDEILKRAAQSGRFIAAIAGPPGAGKSTLSEALAGAIAEAGGSAAVLPMDGFHMDNAVLVEKGLLARKGAPETF DVRSFLATLAAVRADDGEVLVPVFDRSRELAIASARIIAPQTRIVLVEGNYLLLDEAPWTRLDGAFDYTIFVDPGLEVLE RRLLQRWSDHGFDDEAARSKAYGNDIPNARRVVERRRPADTVIRDF
Sequences:
>Translated_206_residues MSIKSLVDEILKRAAQSGRFIAAIAGPPGAGKSTLSEALAGAIAEAGGSAAVLPMDGFHMDNAVLVEKGLLARKGAPETF DVRSFLATLAAVRADDGEVLVPVFDRSRELAIASARIIAPQTRIVLVEGNYLLLDEAPWTRLDGAFDYTIFVDPGLEVLE RRLLQRWSDHGFDDEAARSKAYGNDIPNARRVVERRRPADTVIRDF >Mature_205_residues SIKSLVDEILKRAAQSGRFIAAIAGPPGAGKSTLSEALAGAIAEAGGSAAVLPMDGFHMDNAVLVEKGLLARKGAPETFD VRSFLATLAAVRADDGEVLVPVFDRSRELAIASARIIAPQTRIVLVEGNYLLLDEAPWTRLDGAFDYTIFVDPGLEVLER RLLQRWSDHGFDDEAARSKAYGNDIPNARRVVERRRPADTVIRDF
Specific function: Unknown
COG id: COG1072
COG function: function code H; Panthothenate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789296, Length=189, Percent_Identity=35.978835978836, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004566 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22315; Mature: 22183
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKSLVDEILKRAAQSGRFIAAIAGPPGAGKSTLSEALAGAIAEAGGSAAVLPMDGFHM CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC DNAVLVEKGLLARKGAPETFDVRSFLATLAAVRADDGEVLVPVFDRSRELAIASARIIAP CCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHEEECC QTRIVLVEGNYLLLDEAPWTRLDGAFDYTIFVDPGLEVLERRLLQRWSDHGFDDEAARSK CEEEEEEECCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHH AYGNDIPNARRVVERRRPADTVIRDF HCCCCCCHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure SIKSLVDEILKRAAQSGRFIAAIAGPPGAGKSTLSEALAGAIAEAGGSAAVLPMDGFHM CHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC DNAVLVEKGLLARKGAPETFDVRSFLATLAAVRADDGEVLVPVFDRSRELAIASARIIAP CCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHEEECC QTRIVLVEGNYLLLDEAPWTRLDGAFDYTIFVDPGLEVLERRLLQRWSDHGFDDEAARSK CEEEEEEECCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHH AYGNDIPNARRVVERRRPADTVIRDF HCCCCCCHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2546007; 9278503 [H]